You are here

Home

ASPNIDRAFT_187227-T1, ASPNIDRAFT_187227-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_187227-T1
Unique NameASPNIDRAFT_187227-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1381507..1382630-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_187227-T1 ID=ASPNIDRAFT_187227-T1|Name=ASPNIDRAFT_187227-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1124bp|location=Sequence derived from alignment at ACJE01000020.1:1381507..1382630- (Aspergillus niger ATCC 1015)
ATGATCTACCCTCTGCTTCTCTCTGCATTGCCTCTGCTCAGCAGCGCCGC
CCTGACCTACCGCGGGGCGGATATCTCCTCCCTTTTGATCGAGGAAGATG
CTGGCATCAGCTATAAGAACTTGAATGGCGAGACCCAGGCATTGGAGGAT
ATTCTGGTCAACAATGGCGTCAACTCGATCCGACAGAGGGTGTGGGTAGA
CCCCAGCGATGGCTCGTACGATCTTGACTATAATCTCAAGCTGGCCAAGC
GTGTTCAGGCCGCGGGTATGAGCATTTACTTGGATCTGCATCTCAGTGAT
ACGTGGGCAGATCCCAGTGATCAGGTCCGTCCTACTGCTGGAAGAGAAGA
CATCGCAAGAGAGAGATGGAACACTAACGTAAGAGACGTATACAGACTAC
CCCTACCGGTTGGTCGACCACGGACATCGACACACTCACCTGGCAACTGT
ATAACTACACGCTCGACGTCTGCAACACGTTCGCAGAGAATGACATTGAC
ATAGAGATTGTCTCCATTGGTAATGAGATCAGCAGCGGACTTCTCTGGCC
ATTGGGCAAAACCAGCAACTATGACAATATCGCGAAGCTGCTGCACTCCG
GCGCCTGGGGAGTGAAGGACTCCAACCAGGCCACGACCCCGAAGATTATG
ATCCACCTGGACAACGGATGGGACTGGGAGGAACAAGAATACTTCTACAA
GACTGTCCTGGCCACGGGGTCGCTGCTCTCCACGGATTTCGACCTCATGG
GAGTCTCGTACTATCCATTCTACAACTCGGAAGCTACCCTGTCGGCGCTC
CAGACCAGCCTCACGAACATGCAATCGAACTACGATAAGTCCGTGGTGGT
GGTGGAGACGAACTGGCCCGTGTCTTGCCCGGACCCGGAGTATTCATTCC
CGTCGGATCTCAGCTCGATCCCCTTCTCGGCCGCAGGACAGGAAGAGTTC
CTCGAGAAGCTGGCAGAGGTGGTAGAGGGCGTCACGGACGGACTGGGTAT
TTATTACTGGGAACCGGCTTGGGTCGACAATGCCGCGCTGGGATCCAGCT
GTGCGGACAACCTGATGGTGGATATTGACACGGATGAAGTCCTGGAGAGT
GTCACCGTGTTTGAGGACCTCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:1381507..1382630-

>ASPNIDRAFT_187227-T1 ID=ASPNIDRAFT_187227-T1|Name=ASPNIDRAFT_187227-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2106bp|location=Sequence derived from alignment at ACJE01000020.1:1381507..1382630- (Aspergillus niger ATCC 1015)
ACTACCCCTACCGGTTGGTCGACCACGGACATCGACACACTCACCTGGCA
ACTGTATAACTACACGCTCGACGTCTGCAACACGTTCGCAGAGAATGACA
TTGACATAGAGATTGTCTCCATTGGTAATGAGATCAGCAGCGGACTTCTC
TGGCCATTGGGCAAAACCAGCAACTATGACAATATCGCGAAGCTGCTGCA
CTCCGGCGCCTGGGGAGTGAAGGACTCCAACCAGGCCACGACCCCGAAGA
TTATGATCCACCTGGACAACGGATGGGACTGGGAGGAACAAGAATACTTC
TACAAGACTGTCCTGGCCACGGGGTCGCTGCTCTCCACGGATTTCGACCT
CATGGGAGTCTCGTACTATCCATTCTACAACTCGGAAGCTACCCTGTCGG
CGCTCCAGACCAGCCTCACGAACATGCAATCGAACTACGATAAGTCCGTG
GTGGTGGTGGAGACGAACTGGCCCGTGTCTTGCCCGGACCCGGAGTATTC
ATTCCCGTCGGATCTCAGCTCGATCCCCTTCTCGGCCGCAGGACAGGAAG
AGTTCCTCGAGAAGCTGGCAGAGGTGGTAGAGGGCGTCACGGACGGACTG
GGTATTTATTACTGGGAACCGGCTTGGGTCGACAATGCCGCGCTGGGATC
CAGCTGTGCGGACAACCTGATGGTGGATATTGACACGGATGAAGTCCTGG
AGAGTGTCACCGTGTTTGAGGACCTCTGAATGATCTACCCTCTGCTTCTC
TCTGCATTGCCTCTGCTCAGCAGCGCCGCCCTGACCTACCGCGGGGCGGA
TATCTCCTCCCTTTTGATCGAGGAAGATGCTGGCATCAGCTATAAGAACT
TGAATGGCGAGACCCAGGCATTGGAGGATATTCTGGTCAACAATGGCGTC
AACTCGATCCGACAGAGGGTGTGGGTAGACCCCAGCGATGGCTCGTACGA
TCTTGACTATAATCTCAAGCTGGCCAAGCGTGTTCAGGCCGCGGGTATGA
GCATTTACTTGGATCTGCATCTCAGTGATACGTGGGCAGATCCCAGTGAT
CAGACTACCCCTACCGGTTGGTCGACCACGGACATCGACACACTCACCTG
GCAACTGTATAACTACACGCTCGACGTCTGCAACACGTTCGCAGAGAATG
ACATTGACATAGAGATTGTCTCCATTGGTAATGAGATCAGCAGCGGACTT
CTCTGGCCATTGGGCAAAACCAGCAACTATGACAATATCGCGAAGCTGCT
GCACTCCGGCGCCTGGGGAGTGAAGGACTCCAACCAGGCCACGACCCCGA
AGATTATGATCCACCTGGACAACGGATGGGACTGGGAGGAACAAGAATAC
TTCTACAAGACTGTCCTGGCCACGGGGTCGCTGCTCTCCACGGATTTCGA
CCTCATGGGAGTCTCGTACTATCCATTCTACAACTCGGAAGCTACCCTGT
CGGCGCTCCAGACCAGCCTCACGAACATGCAATCGAACTACGATAAGTCC
GTGGTGGTGGTGGAGACGAACTGGCCCGTGTCTTGCCCGGACCCGGAGTA
TTCATTCCCGTCGGATCTCAGCTCGATCCCCTTCTCGGCCGCAGGACAGG
AAGAGTTCCTCGAGAAGCTGGCAGAGGTGGTAGAGGGCGTCACGGACGGA
CTGGGTATTTATTACTGGGAACCGGCTTGGGTCGACAATGCCGCGCTGGG
ATCCAGCTGTGCGGACAACCTGATGGTGGATATTGACACGGATGAAGTCC
TGGAGAGTGTCACCGTGTTTGAGGACCTCTGAATGATCTACCCTCTGCTT
CTCTCTGCATTGCCTCTGCTCAGCAGCGCCGCCCTGACCTACCGCGGGGC
GGATATCTCCTCCCTTTTGATCGAGGAAGATGCTGGCATCAGCTATAAGA
ACTTGAATGGCGAGACCCAGGCATTGGAGGATATTCTGGTCAACAATGGC
GTCAACTCGATCCGACAGAGGGTGTGGGTAGACCCCAGCGATGGCTCGTA
CGATCTTGACTATAATCTCAAGCTGGCCAAGCGTGTTCAGGCCGCGGGTA
TGAGCATTTACTTGGATCTGCATCTCAGTGATACGTGGGCAGATCCCAGT
GATCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0015926glucosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187227ASPNIDRAFT_187227Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187227-T1ASPNIDRAFT_187227-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187227-T1.cdsASPNIDRAFT_187227-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_187227-T1.exon2ASPNIDRAFT_187227-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_187227-T1.exon1ASPNIDRAFT_187227-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
NoteCAZy:GH53
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR011683
DBxrefPFAM:PF07745
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1381507..1382630 -
Powered by Drupal