You are here

Home

ASPNIDRAFT_188089-T1, ASPNIDRAFT_188089-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_188089-T1
Unique NameASPNIDRAFT_188089-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1397704..1400513+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_188089-T1 ID=ASPNIDRAFT_188089-T1|Name=ASPNIDRAFT_188089-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2810bp|location=Sequence derived from alignment at ACJE01000020.1:1397704..1400513+ (Aspergillus niger ATCC 1015)
ATGCACAGGGCTGTTGGCGCCCCTGTGGTGCCAACGCTCCTTGTCCTCCT
GCTCTTCGCCAGCCCGGCTTCCACAGCAGTCCCATACACTCCCTCACAGC
TCTTCTACTCTTCAACTAGCAATGGATCGTTCGCCTACCTGCTGCAATCC
ACCGGTACGAGTCAAGATGCCTCCACCGAATTTATTACCTGGGATATTTC
AGGTGACATCGATACAACAAGCCCGAGTTACAATATCCTGATGGACCCAT
TGCCCTTTCAACTCGACTCTCAGTCGCCTGCCTTTGTGCCTGTTATCGAC
CAGCATGGAGTGATCAAGATGTATGTAGGCGATTGCCAGAAAGCCCTGGA
TCAGGGTGAGCTGTGGCAGTTTACGCCGGACAACAACAGCTCGATTGGAG
ATGGGGCATGGGAGAAGCTCTCTGTGAAGGAAAGCGAGTCAAGCGACAGC
GTGGATGCACCGAACTATCTCTCAGCAGGGTTCGCATATGCCTCCACCAA
TACCTCTGACAGCTCCGTCTACGCTTTTGGCGGGATGTGCCCTTTCTCGA
ATGCCTCAGAAACGAATTGGATGGGTGGCGCCAACTACTCCCAGTCCATG
GTGGTCCTTGAGCCATCCGGATCCCGCAGGACCGATGCTTATGATGCATC
CACCACCGGCAATCGCGCACCCCCGATTGCAGAGGCCGGCTTTACCGTGA
CTCCGCTGCAAGCAACTTATGCATATTCATCGAGCGGCGAGGTGCGCCAG
CAACAGGACTTTCTCCTGATCGGTGGCCAAACCCAGGATGCATTCATCAA
TATGTCGCAGCTTGCGGTGTTTTCTCTACCCCAGAATAGCTGGAGCTTCG
TGACAGTTGATATTACTTCTGCCTCCTACAAGACTGAGCTTGCTGTGAGG
GATGTTGCCACGGTAGAGCCGAGATCGGGGCATACGGCAGTTCTTTCCCC
GGATGGCAGCAAGGTCATCGTGTACGGAGGCTGGGTGGGGAACACGAGCA
TTGCTGCTCAACCGCAGCTAGTCATACTGGAACTAGGAGAAACCTATGGA
GGCGCCGGTGATTGGACTTGGAGGGTACTCTCAACTGGGGATACGGAGAC
CACAGGAGGGAGCGGTCTTTATGGGCATGGGGCAGCAATGCTGCCTGGTG
ATGTGATGATGGTGGCAGGCGGATATACTATACCACAGTCGTCGTCGTCG
TCGTCATCCTCGTCGAAGCGTTCAGCCAAGCAATCCCAGCCCAACTCACA
GGTCTATCTCTATAATATCACCTCCGAGGAATGGGTCTCAACTTACCGAA
ATCCTGACTCCATTGCTAGTCAACAGGATTCCTCCCACTCTGGCTCATCA
AAAACATGGAAAACTGGGGTAGGAGTTGGTGTTGGACTGGGAATTCCTGT
CATTGCTGGCCTCGCTATCCTCCTATTCTTCCTTTGGAAGAGGCGTCAAA
AGCGCCGCGTGCGAGATAAGGAGCTCCGCAAGCTAGCCTTGGGGGCAGAA
AGAGCCCACTTCTGGGGTCAAGGGGAGCCTTTTATGGCGAGCAGTATCCA
CAAGCCCTCCATGAAGGAGACGGAAGGGAGGAGTGACTACCCTTGGATGG
GCAATAGTGGATCTGGGCGGCCATTTAGTTGGCAGGATACAGGGGATGCA
GTCGCGGAAAGCACTGGTCTGCTCGGGGATCCTAGTCCTACAACTACAGG
TCGTTCTAGTCTGAGCGCGAGAATGTATCGCCCCCCTACGCAATACAGCG
AGTACAGAAGGAGTGATGCCACGGGTGATATCCACCCGATCGATGAGCGT
GAGGAAGATGAAGCGAAAGACGCCGTGGGTGGTCCCATGCAGAAAACAAT
TGACAATTTCCGGGCCGAGTCAACAATATTGACACCCTTGAGCACGACCG
TATGCGGAGACTCATATGCTGGTGGCTCGGCCGGGCCGTCCGACTACATG
GCTGGAGTTGGCTATGACAGAGACATACCTTCTTCGTCAGATAAGGATGA
ACGGACATCCTCAAACCTCTCCGATTCCTCCACGTCAGCAAAATCTATCT
CTCAACCTCGCATGGCCAACTTTAGCTACCCGGCGAGTCAACCAAGCAGT
GGGCGTCAGTCACCTCAGAAATCTGTTACAATTTCGATACCTAGTCGGGA
GCCAGCCCGCAGCAGACCGAACAGTGCAGCGCTTTCATTCGAAAAGCGCT
ACTCTTCTGACTCCTACTCTACCGCTCAGACCTCACTCTCCCTTCGACAA
GCTGAAGGCGAGCATCTTCTCCGCGACAACCCTGAACCGACGTCCCCACT
CGATCTATTCCCCAAACCCACCACATTCCCCAAGCAACGCACATCTGAAT
GGATCGGCAACAACGTTCGCAGAGTGCTCTCCCTAACGCGGAGACGTCCA
GCAACCGACTCGGATCCGACCACAGCGCCCCTCGCCTCTGGAATAGACCG
CAGAAGTACGGTTCTCGGTCCCAACTCAACTGCTACAGGCTACGGCCTTC
CGCGCCGCTCCGTCAGCGCATCAGCCGAACTCTTCAAACGCAAACAAGGA
GCCAAAGACTGGGGCGCAGCCAACAGACTCTCACGCAATATGGAATCCCA
GGCGCGGTCCACACGGGATGACACCACCCTAGGCGCATATCTAGACCTTG
ATCCAGACAGTGACGACGATTGGGACGTGGAAGGTGCTGCAGAAGGCCGT
CGCGTCCAGGTAACCTTCACCGTACCGAAGGAGAAACTCCGCGTCGTCAA
CGCCACCGCAGGCGAACTGGACACATTCTCCGAGAAGTCCGTCAGCAGAA
GCAATAGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:1397704..1400513+

>ASPNIDRAFT_188089-T1 ID=ASPNIDRAFT_188089-T1|Name=ASPNIDRAFT_188089-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2809bp|location=Sequence derived from alignment at ACJE01000020.1:1397704..1400513+ (Aspergillus niger ATCC 1015)
ATGCACAGGGCTGTTGGCGCCCCTGTGGTGCCAACGCTCCTTGTCCTCCT
GCTCTTCGCCAGCCCGGCTTCCACAGCAGTCCCATACACTCCCTCACAGC
TCTTCTACTCTTCAACTAGCAATGGATCGTTCGCCTACCTGCTGCAATCC
ACCGGTACGAGTCAAGATGCCTCCACCGAATTTATTACCTGGGATATTTC
AGGTGACATCGATACAACAAGCCCGAGTTACAATATCCTGATGGACCCAT
TGCCCTTTCAACTCGACTCTCAGTCGCCTGCCTTTGTGCCTGTTATCGAC
CAGCATGGAGTGATCAAGATGTATGTAGGCGATTGCCAGAAAGCCCTGGA
TCAGGGTGAGCTGTGGCAGTTTACGCCGGACAACAACAGCTCGATTGGAG
ATGGGGCATGGGAGAAGCTCTCTGTGAAGGAAAGCGAGTCAAGCGACAGC
GTGGATGCACCGAACTATCTCTCAGCAGGGTTCGCATATGCCTCCACCAA
TACCTCTGACAGCTCCGTCTACGCTTTTGGCGGGATGTGCCCTTTCTCGA
ATGCCTCAGAAACGAATTGGATGGGTGGCGCCAACTACTCCCAGTCCATG
GTGGTCCTTGAGCCATCCGGATCCCGCAGGACCGATGCTTATGATGCATC
CACCACCGGCAATCGCGCACCCCCGATTGCAGAGGCCGGCTTTACCGTGA
CTCCGCTGCAAGCAACTTATGCATATTCATCGAGCGGCGAGGTGCGCCAG
CAACAGGACTTTCTCCTGATCGGTGGCCAAACCCAGGATGCATTCATCAA
TATGTCGCAGCTTGCGGTGTTTTCTCTACCCCAGAATAGCTGGAGCTTCG
TGACAGTTGATATTACTTCTGCCTCCTACAAGACTGAGCTTGCTGTGAGG
GATGTTGCCACGGTAGAGCCGAGATCGGGGCATACGGCAGTTCTTTCCCC
GGATGGCAGCAAGGTCATCGTGTACGGAGGCTGGGTGGGGAACACGAGCA
TTGCTGCTCAACCGCAGCTAGTCATACTGGAACTAGGAGAAACCTATGGA
GGCGCCGGTGATTGGACTTGGAGGGTACTCTCAACTGGGGATACGGAGAC
CACAGGAGGGAGCGGTCTTTATGGGCATGGGGCAGCAATGCTGCCTGGTG
ATGTGATGATGGTGGCAGGCGGATATACTATACCACAGTCGTCGTCGTCG
TCGTCATCCTCGTCGAAGCGTTCAGCCAAGCAATCCCAGCCCAACTCACA
GGTCTATCTCTATAATATCACCTCCGAGGAATGGGTCTCAACTTACCGAA
ATCCTGACTCCATTGCTAGTCAACAGGATTCCTCCCACTCTGGCTCATCA
AAAACATGGAAAACTGGGGTAGGAGTTGGTGTTGGACTGGGAATTCCTGT
CATTGCTGGCCTCGCTATCCTCCTATTCTTCCTTTGGAAGAGGCGTCAAA
AGCGCCGCGTGCGAGATAAGGAGCTCCGCAAGCTAGCCTTGGGGGCAGAA
AGAGCCCACTTCTGGGGTCAAGGGGAGCCTTTTATGGCGAGCAGTATCCA
CAAGCCCTCCATGAAGGAGACGGAAGGGAGGAGTGACTACCCTTGGATGG
GCAATAGTGGATCTGGGCGGCCATTTAGTTGGCAGGATACAGGGGATGCA
GTCGCGGAAAGCACTGGTCTGCTCGGGGATCCTAGTCCTACAACTACAGG
TCGTTCTAGTCTGAGCGCGAGAATGTATCGCCCCCCTACGCAATACAGCG
AGTACAGAAGGAGTGATGCCACGGGTGATATCCACCCGATCGATGAGCGT
GAGGAAGATGAAGCGAAAGACGCCGTGGGTGGTCCCATGCAGAAAACAAT
TGACAATTTCCGGGCCGAGTCAACAATATTGACACCCTTGAGCACGACCG
TATGCGGAGACTCATATGCTGGTGGCTCGGCCGGGCCGTCCGACTACATG
GCTGGAGTTGGCTATGACAGAGACATACCTTCTTCGTCAGATAAGGATGA
ACGGACATCCTCAAACCTCTCCGATTCCTCCACGTCAGCAAAATCTATCT
CTCAACCTCGCATGGCCAACTTTAGCTACCCGGCGAGTCAACCAAGCAGT
GGGCGTCAGTCACCTCAGAAATCTGTTACAATTTCGATACCTAGTCGGGA
GCCAGCCCGCAGCAGACCGAACAGTGCAGCGCTTTCATTCGAAAAGCGCT
ACTCTTCTGACTCCTACTCTACCGCTCAGACCTCACTCTCCCTTCGACAA
GCTGAAGGCGAGCATCTTCTCCGCGACAACCCTGAACCGACGTCCCCACT
CGATCTATTCCCCAAACCCACCACATTCCCCAAGCAACGCACATCTGAAT
GGATCGGCAACAACGTTCGCAGAGTGCTCTCCCTAACGCGGAGACGTCCA
GCAACCGACTCGGATCCGACCACAGCGCCCCTCGCCTCTGGAATAGACCG
CAGAAGTACGGTTCTCGGTCCCAACTCAACTGCTACAGGCTACGGCCTTC
CGCGCCGCTCCGTCAGCGCATCAGCCGAACTCTTCAAACGCAAACAAGGA
GCCAAAGACTGGGGCGCAGCCAACAGACTCTCACGCAATATGGAATCCCA
GGCGCGGTCCACACGGGATGACACCACCCTAGGCGCATATCTAGACCTTG
ATCCAGACAGTGACGACGATTGGGACGTGGAAGGTGCTGCAGAAGGCCGT
CGCGTCCAGGTAACCTTCACCGTACCGAAGGAGAAACTCCGCGTCGTCAA
CGCCACCGCAGGCGAACTGGACACATTCTCCGAGAAGTCCGTCAGCAGAA
GCAATAGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188089ASPNIDRAFT_188089Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188089-T1.exon1ASPNIDRAFT_188089-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188089-T1.cdsASPNIDRAFT_188089-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188089-T1ASPNIDRAFT_188089-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-25)
DBxrefInterPro:IPR011043
DBxrefInterPro:IPR015915
Productgalactose oxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1397704..1400513 +
Powered by Drupal