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ASPNIDRAFT_188158-T1, ASPNIDRAFT_188158-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_188158-T1
Unique NameASPNIDRAFT_188158-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:254666..255232-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_188158-T1 ID=ASPNIDRAFT_188158-T1|Name=ASPNIDRAFT_188158-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=567bp|location=Sequence derived from alignment at ACJE01000001.1:254666..255232- (Aspergillus niger ATCC 1015)
ATGGGTGACTTGGGTCCATATCTCGAATACGATGGTGAGGACTATATATG
TTCTATATGCGACAGGTATTTCAGGACTGATGGTGCACTTTTCGCCCACT
GCAGAGCGACTACACGACATGAATGGTGTGAGAGATGTCGTCGGGTATTT
ATATCAGAGGCCTCGAAAAATGCACATATTCAAGCATCCAACAAACATCA
TATTTGTCGTTCCTGTCGTGAAGCAACAGACTTTGAATCCAATCAAGATC
TTCGAGACCATCTAGTGGGTTATCATCATGCTTGTCTCGAATGCAATATT
TTCCTCGAGTCTGCTGAAGGTCTCCGAAGCCATGATATCTCTGACCACTG
TCTTTGCGATGTGTGCGACAAGTATTTCAGCAATGAAAACAATCTGAGAA
TGGTAAGCTGACCAACATGATGGTTGTTGTATGAAGGTTTCTCATACTTT
TCTTCTTTCTAGCATCGGCAGAAGCACCAAGCCAAGACGTTGGAATGTTA
TGGCTGCTATCACAACTTCAAGTCATTTTCCGGGATGTTGATTCATCTGG
AATCCGGGGCGTGTCAA
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Coding sequence (CDS) from alignment at ACJE01000001.1:254666..255232-

>ASPNIDRAFT_188158-T1 ID=ASPNIDRAFT_188158-T1|Name=ASPNIDRAFT_188158-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1010bp|location=Sequence derived from alignment at ACJE01000001.1:254666..255232- (Aspergillus niger ATCC 1015)
CATCGGCAGAAGCACCAAGCCAAGACGTTGGAATGTTATGGCTGCTATCA
CAACTTCAAGTCATTTTCCGGGATGTTGATTCATCTGGAATCCGGGGCGT
GTCATGGGTGACTTGGGTCCATATCTCGAATACGATGGTGAGGACTATAT
ATGTTCTATATGCGACAGGTATTTCAGGACTGATGGTGCACTTTTCGCCC
ACTGCAGAGCGACTACACGACATGAATGGTGTGAGAGATGTCGTCGGGTA
TTTATATCAGAGGCCTCGAAAAATGCACATATTCAAGCATCCAACAAACA
TCATATTTGTCGTTCCTGTCGTGAAGCAACAGACTTTGAATCCAATCAAG
ATCTTCGAGACCATCTAGTGGGTTATCATCATGCTTGTCTCGAATGCAAT
ATTTTCCTCGAGTCTGCTGAAGGTCTCCGAAGCCATGATATCTCTGACCA
CTGTCTTTGCGATGTGTGCGACAAGTATTTCAGCAATGAAAACAATCTGA
GAATGCATCGGCAGAAGCACCAAGCCAAGACGTTGGAATGTTATGGCTGC
TATCACAACTTCAAGTCATTTTCCGGGATGTTGATTCATCTGGAATCCGG
GGCGTGTCATGGGTGACTTGGGTCCATATCTCGAATACGATGGTGAGGAC
TATATATGTTCTATATGCGACAGGTATTTCAGGACTGATGGTGCACTTTT
CGCCCACTGCAGAGCGACTACACGACATGAATGGTGTGAGAGATGTCGTC
GGGTATTTATATCAGAGGCCTCGAAAAATGCACATATTCAAGCATCCAAC
AAACATCATATTTGTCGTTCCTGTCGTGAAGCAACAGACTTTGAATCCAA
TCAAGATCTTCGAGACCATCTAGTGGGTTATCATCATGCTTGTCTCGAAT
GCAATATTTTCCTCGAGTCTGCTGAAGGTCTCCGAAGCCATGATATCTCT
GACCACTGTCTTTGCGATGTGTGCGACAAGTATTTCAGCAATGAAAACAA
TCTGAGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188158ASPNIDRAFT_188158Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188158-T1ASPNIDRAFT_188158-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188158-T1.cdsASPNIDRAFT_188158-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188158-T1.utr3p1ASPNIDRAFT_188158-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188158-T1.exon2ASPNIDRAFT_188158-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_188158-T1.exon1ASPNIDRAFT_188158-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:254666..255232 -
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