You are here

Home

ASPNIDRAFT_188224-T1, ASPNIDRAFT_188224-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_188224-T1
Unique NameASPNIDRAFT_188224-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:234170..234755-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_188224-T1 ID=ASPNIDRAFT_188224-T1|Name=ASPNIDRAFT_188224-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=586bp|location=Sequence derived from alignment at ACJE01000001.1:234170..234755- (Aspergillus niger ATCC 1015)
ATGATTTGCAACACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCA
AGCAAGCCCTATCGCCAAGCGCGATGCTGCGACAGTGCTTTCCGACCTTG
AGACTATTGGAAATGACGTTACTACTCTCAAGACGGACGTTACCAACTGG
ACCGGAGACCTTCTCGCAGCTCTAGGCATTTTGTCCGATTACAACACCGT
CAAAAGTGCTTTGGACACGGCCATAACTGATACGGAGGCCGCTTCCGCAT
TCACCGATACGGAGAGTTCCAGCATCACAACTGAAGTAACTTCTCTAGCC
ACGATCATTATAGCAACCCTAGATGAGCTTATCTCCAAGGTAAATTCAAG
AAAGCCGACGAGCTTCATTGTTCTGTTGTTGCAGGACTGATGCACAGTTC
TAGGAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACTTTGCTCTCCTC
CCTGGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGG
CGAAGGCCACCACGACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCC
ATCGACGCGGCATTTTCGAGTGCAATTGCTGCCTAT
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:234170..234755-

>ASPNIDRAFT_188224-T1 ID=ASPNIDRAFT_188224-T1|Name=ASPNIDRAFT_188224-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1044bp|location=Sequence derived from alignment at ACJE01000001.1:234170..234755- (Aspergillus niger ATCC 1015)
GAGTCTACTGCGGCATCTGCGGGCGTCACTTCCACTTTGCTCTCCTCCCT
GGAGACACTCAAGACCGACACGGACGAGCTGGGGGCGGACCTGGAGGCGA
AGGCCACCACGACGGATGCGGCAACCATTGCCTCGACTCTTGCCTCCATC
GACGCGGCATTTTCGAGTGCAATTGCTGCCTATATGATTTGCAACACTTT
GCTCGTCGTTGCATTGAGTCTGGGTCTCGTCCAAGCAAGCCCTATCGCCA
AGCGCGATGCTGCGACAGTGCTTTCCGACCTTGAGACTATTGGAAATGAC
GTTACTACTCTCAAGACGGACGTTACCAACTGGACCGGAGACCTTCTCGC
AGCTCTAGGCATTTTGTCCGATTACAACACCGTCAAAAGTGCTTTGGACA
CGGCCATAACTGATACGGAGGCCGCTTCCGCATTCACCGATACGGAGAGT
TCCAGCATCACAACTGAAGTAACTTCTCTAGCCACGATCATTATAGCAAC
CCTAGATGAGCTTATCTCCAAGGAGTCTACTGCGGCATCTGCGGGCGTCA
CTTCCACTTTGCTCTCCTCCCTGGAGACACTCAAGACCGACACGGACGAG
CTGGGGGCGGACCTGGAGGCGAAGGCCACCACGACGGATGCGGCAACCAT
TGCCTCGACTCTTGCCTCCATCGACGCGGCATTTTCGAGTGCAATTGCTG
CCTATATGATTTGCAACACTTTGCTCGTCGTTGCATTGAGTCTGGGTCTC
GTCCAAGCAAGCCCTATCGCCAAGCGCGATGCTGCGACAGTGCTTTCCGA
CCTTGAGACTATTGGAAATGACGTTACTACTCTCAAGACGGACGTTACCA
ACTGGACCGGAGACCTTCTCGCAGCTCTAGGCATTTTGTCCGATTACAAC
ACCGTCAAAAGTGCTTTGGACACGGCCATAACTGATACGGAGGCCGCTTC
CGCATTCACCGATACGGAGAGTTCCAGCATCACAACTGAAGTAACTTCTC
TAGCCACGATCATTATAGCAACCCTAGATGAGCTTATCTCCAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188224ASPNIDRAFT_188224Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188224-T1ASPNIDRAFT_188224-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188224-T1.cdsASPNIDRAFT_188224-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188224-T1.exon2ASPNIDRAFT_188224-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_188224-T1.exon1ASPNIDRAFT_188224-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR021054
DBxrefPFAM:PF12296
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:234170..234755 -
Powered by Drupal