You are here

Home

ASPNIDRAFT_188704-T1, ASPNIDRAFT_188704-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_188704-T1
Unique NameASPNIDRAFT_188704-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1273823..1274795+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_188704-T1 ID=ASPNIDRAFT_188704-T1|Name=ASPNIDRAFT_188704-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=973bp|location=Sequence derived from alignment at ACJE01000001.1:1273823..1274795+ (Aspergillus niger ATCC 1015)
ATGCATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGAC
AGTCGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATC
CTACTGACGATGTGACATCCAGTGTGAAGTTGCGCGATGTGAAAGTGTAC
GTGTACCATCTTTCTCCAATCGAATCCAATCCCACCCAATCCAATACCTA
CTACAACAACAACAACACAACTACCCCCATAAGCAAGAAGAATGGAATAA
CTAACACAACCAACCCAACAGAACAAAAGGCCGTCCCCACTACTACAGCA
CGCGAAAGGAAGAATACGCCGCCATGAAATTCGACCTAGACGCTGGTACT
TCCATCCCTCCCCCCTCCCCCCTGCTCCTCAACTTCCCCAACACCACCAC
CACCACTACACTAATACTAACCATTCCCTCAATGAACCCAAAGACTTAAC
CCCCCTCTTCAACTGGAACACCAAACAACTCTTCGTCTACGTCTACGCCA
CCTACCCTTCCGACCCCTCGAATCCAACCACCTCCGCGCCCTCCCACTCC
GTCATCTGGGACACTATCATCCCCGCCCCGGAGTCGCCTTACTCCTTTAA
TGCCCTGCGCGAGAAGTTCTTCCCTTCTGCATCATCTGCGAACAAGAAGC
GCAGCAGCACGAAGAAGACGTCCACTACTAGCAAAACTGCCAAGAAGGCA
TCTGAGCCCGGGAAGCTGAGACTCCGCGACCAGAGAGCGAAGTACTCTAT
CGGAGATGTTTCGGGGAAGATGGCCGAACGGGAGAATGTCACTCTTTCTG
TGGGGTGGAATGTGCAGCCGTGGGTTGGGGCGCTGTGGTGGGCTCCGGAG
ACTGGGGGTGCGATGAGGACGAAGGGCGATGTCGGGACGAGTAAGGCTTT
TGGGCTGCCGGCGCTGAAGGGGAGGAATGTTGGGACTGCTTCTGCTTCTG
CTGCTGGTGCCGGGGCGGCGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:1273823..1274795+

>ASPNIDRAFT_188704-T1 ID=ASPNIDRAFT_188704-T1|Name=ASPNIDRAFT_188704-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2196bp|location=Sequence derived from alignment at ACJE01000001.1:1273823..1274795+ (Aspergillus niger ATCC 1015)
ATGCATTCCACCCTCAACCGCGCCCAAGGCGTCTTCGGCTTCTTCACGAC
AGTCGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAGCGTGTTTCTCTATC
CTACTGACGATGTGACATCCAGTGTGAAAACAAAAGGCCGTCCCCACTAC
TACAGCACGCGAAAGGAAGAATACGCCGCCATGAAATTCGACCTAGACGC
TGACTTAACCCCCCTCTTCAACTGGAACACCAAACAACTCTTCGTCTACG
TCTACGCCACCTACCCTTCCGACCCCTCGAATCCAACCACCTCCGCGCCC
TCCCACTCCGTCATCTGGGACACTATCATCCCCGCCCCGGAGTCGCCTTA
CTCCTTTAATGCCCTGCGCGAGAAGTTCTTCCCTTCTGCATCATCTGCGA
ACAAGAAGCGCAGCAGCACGAAGAAGACGTCCACTACTAGCAAAACTGCC
AAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCGCGACCAGAGAGCGAA
GTACTCTATCGGAGATGTTTCGGGGAAGATGGCCGAACGGGAGAATGTCA
CTCTTTCTGTGGGGTGGAATGTGCAGCCGTGGGTTGGGGCGCTGTGGTGG
GCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGGCGATGTCGGGACGAG
TAAGGCTTTTGGGCTGCCGGCGCTGAAGGGGAGGAATGTTGGGACTGCTT
CTGCTTCTGCTGCTGGTGCCGGGGCGGCGTAGATGCATTCCACCCTCAAC
CGCGCCCAAGGCGTCTTCGGCTTCTTCACGACAGTCGCTCTCTTCGTCGC
CGGTCTCGCGGCTCTCAGCGTGTTTCTCTATCCTACTGACGATGTGACAT
CCAGTGTGAAAACAAAAGGCCGTCCCCACTACTACAGCACGCGAAAGGAA
GAATACGCCGCCATGAAATTCGACCTAGACGCTGACTTAACCCCCCTCTT
CAACTGGAACACCAAACAACTCTTCGTCTACGTCTACGCCACCTACCCTT
CCGACCCCTCGAATCCAACCACCTCCGCGCCCTCCCACTCCGTCATCTGG
GACACTATCATCCCCGCCCCGGAGTCGCCTTACTCCTTTAATGCCCTGCG
CGAGAAGTTCTTCCCTTCTGCATCATCTGCGAACAAGAAGCGCAGCAGCA
CGAAGAAGACGTCCACTACTAGCAAAACTGCCAAGAAGGCATCTGAGCCC
GGGAAGCTGAGACTCCGCGACCAGAGAGCGAAGTACTCTATCGGAGATGT
TTCGGGGAAGATGGCCGAACGGGAGAATGTCACTCTTTCTGTGGGGTGGA
ATGTGCAGCCGTGGGTTGGGGCGCTGTGGTGGGCTCCGGAGACTGGGGGT
GCGATGAGGACGAAGGGCGATGTCGGGACGAGTAAGGCTTTTGGGCTGCC
GGCGCTGAAGGGGAGGAATGTTGGGACTGCTTCTGCTTCTGCTGCTGGTG
CCGGGGCGGCGTAGATGCATTCCACCCTCAACCGCGCCCAAGGCGTCTTC
GGCTTCTTCACGACAGTCGCTCTCTTCGTCGCCGGTCTCGCGGCTCTCAG
CGTGTTTCTCTATCCTACTGACGATGTGACATCCAGTGTGAAAACAAAAG
GCCGTCCCCACTACTACAGCACGCGAAAGGAAGAATACGCCGCCATGAAA
TTCGACCTAGACGCTGACTTAACCCCCCTCTTCAACTGGAACACCAAACA
ACTCTTCGTCTACGTCTACGCCACCTACCCTTCCGACCCCTCGAATCCAA
CCACCTCCGCGCCCTCCCACTCCGTCATCTGGGACACTATCATCCCCGCC
CCGGAGTCGCCTTACTCCTTTAATGCCCTGCGCGAGAAGTTCTTCCCTTC
TGCATCATCTGCGAACAAGAAGCGCAGCAGCACGAAGAAGACGTCCACTA
CTAGCAAAACTGCCAAGAAGGCATCTGAGCCCGGGAAGCTGAGACTCCGC
GACCAGAGAGCGAAGTACTCTATCGGAGATGTTTCGGGGAAGATGGCCGA
ACGGGAGAATGTCACTCTTTCTGTGGGGTGGAATGTGCAGCCGTGGGTTG
GGGCGCTGTGGTGGGCTCCGGAGACTGGGGGTGCGATGAGGACGAAGGGC
GATGTCGGGACGAGTAAGGCTTTTGGGCTGCCGGCGCTGAAGGGGAGGAA
TGTTGGGACTGCTTCTGCTTCTGCTGCTGGTGCCGGGGCGGCGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005787signal peptidase complex
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188704ASPNIDRAFT_188704Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188704-T1.exon1ASPNIDRAFT_188704-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_188704-T1.exon2ASPNIDRAFT_188704-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_188704-T1.exon3ASPNIDRAFT_188704-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188704-T1.cdsASPNIDRAFT_188704-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188704-T1ASPNIDRAFT_188704-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264VC6
DBxrefInterPro:IPR007653
DBxrefPFAM:PF04573
Productsignal peptidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1273823..1274795 +
Powered by Drupal