You are here

Home

ASPNIDRAFT_188791-T1, ASPNIDRAFT_188791-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_188791-T1
Unique NameASPNIDRAFT_188791-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:122330..123052+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_188791-T1 ID=ASPNIDRAFT_188791-T1|Name=ASPNIDRAFT_188791-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=723bp|location=Sequence derived from alignment at ACJE01000001.1:122330..123052+ (Aspergillus niger ATCC 1015)
ATGCCCAACCACGTCGTATTCGACGTCGTCGGCACCTGCGTGTCCTTCGA
TGCCTTCTACGACACCATCGAGCGCACCCTGGGCCCGCAGCTCCAGGCGC
ACCACATCACCGCCCAAGCCCTCGGGTTCACATGGATGACCAACGCCGAG
CTGCAATTCACCTTTCTGTCCATCTCCGAAAGCTACAAACCATACAAGAT
CGTCATCACTGAACTCTTCTACCAAACCCTCGCCATGATCGGCATTTCCG
ACCCGCACAGCTTCGCCACCCCCGAGCAACGCGACGCCTGCGTAGCTGGA
TACGCCGCCCTCGAGCTCCGCCCTGGTGCCCGCGAATGCTTCGCCAAGCT
CCGCGATGCCGGGTTCACGGTCTGGTGCCTGACGACGGGCGATACGCAGC
GGGTCCGCGGATACTTTGAACGGGCGGGTGTGGACATGCCGTTGGAGAAT
TTCCTCAGCTGTGATACGGCGGGCGTGGCTAAGCCGGCGCTGGCGGCGTA
TCGGCCGGCGTGGGAGAAGTTGGGTAGTGAGGGTGGGCAGAAGTGGTTTG
CTGCGGCGCATCTGTGGGATGTGACTGCTGCTACAAAGGTCGGGTTCCGG
GGTGCTTATTGTACGGTTTATGAGAAGCAGGGGGCCTATAAGGTGTTTGA
TGCGCCGTTGGATGTGGTGTCGGAGACGCTTCCGGAGATGGCGGAGAAGA
TTATTGCTGCGTCTAAACATTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:122330..123052+

>ASPNIDRAFT_188791-T1 ID=ASPNIDRAFT_188791-T1|Name=ASPNIDRAFT_188791-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=723bp|location=Sequence derived from alignment at ACJE01000001.1:122330..123052+ (Aspergillus niger ATCC 1015)
ATGCCCAACCACGTCGTATTCGACGTCGTCGGCACCTGCGTGTCCTTCGA
TGCCTTCTACGACACCATCGAGCGCACCCTGGGCCCGCAGCTCCAGGCGC
ACCACATCACCGCCCAAGCCCTCGGGTTCACATGGATGACCAACGCCGAG
CTGCAATTCACCTTTCTGTCCATCTCCGAAAGCTACAAACCATACAAGAT
CGTCATCACTGAACTCTTCTACCAAACCCTCGCCATGATCGGCATTTCCG
ACCCGCACAGCTTCGCCACCCCCGAGCAACGCGACGCCTGCGTAGCTGGA
TACGCCGCCCTCGAGCTCCGCCCTGGTGCCCGCGAATGCTTCGCCAAGCT
CCGCGATGCCGGGTTCACGGTCTGGTGCCTGACGACGGGCGATACGCAGC
GGGTCCGCGGATACTTTGAACGGGCGGGTGTGGACATGCCGTTGGAGAAT
TTCCTCAGCTGTGATACGGCGGGCGTGGCTAAGCCGGCGCTGGCGGCGTA
TCGGCCGGCGTGGGAGAAGTTGGGTAGTGAGGGTGGGCAGAAGTGGTTTG
CTGCGGCGCATCTGTGGGATGTGACTGCTGCTACAAAGGTCGGGTTCCGG
GGTGCTTATTGTACGGTTTATGAGAAGCAGGGGGCCTATAAGGTGTTTGA
TGCGCCGTTGGATGTGGTGTCGGAGACGCTTCCGGAGATGGCGGAGAAGA
TTATTGCTGCGTCTAAACATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188791ASPNIDRAFT_188791Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188791-T1.exon1ASPNIDRAFT_188791-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188791-T1.cdsASPNIDRAFT_188791-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_188791-T1ASPNIDRAFT_188791-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000011.1
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR023198
DBxrefInterPro:IPR023214
DBxrefPFAM:PF00702
DBxrefPFAM:PF13419
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:122330..123052 +
Powered by Drupal