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ASPNIDRAFT_189070-T1, ASPNIDRAFT_189070-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_189070-T1
Unique NameASPNIDRAFT_189070-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1442003..1442284+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_189070-T1 ID=ASPNIDRAFT_189070-T1|Name=ASPNIDRAFT_189070-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=282bp|location=Sequence derived from alignment at ACJE01000001.1:1442003..1442284+ (Aspergillus niger ATCC 1015)
ATGCACAAAGACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAA
GAAGGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTT
TCTCTCCCGATGACAAGTACTCTCGGTAGGTTCTTTTCGCCGACGATCTC
CAGGCACATTGGAGAGAATTTGTGGACTAATGATATTGGCTATTTAGGCA
CCGTGTGACCCTCAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCCG
GTATGAAACCCCGAGTGCGAGTCCCCATATAG
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Coding sequence (CDS) from alignment at ACJE01000001.1:1442003..1442284+

>ASPNIDRAFT_189070-T1 ID=ASPNIDRAFT_189070-T1|Name=ASPNIDRAFT_189070-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=420bp|location=Sequence derived from alignment at ACJE01000001.1:1442003..1442284+ (Aspergillus niger ATCC 1015)
ATGCACAAAGACTCTCTGGGCCCCGATGGCAAGCGGGTTTACACCCTCAA
GAAGGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCACCCCGCCCGTT
TCTCTCCCGATGACAAGTACTCTCGGCACCGTGTGACCCTCAAGAAGAGA
TACGGTCTGCTTATGACCCAGCAAGCCGGTATGAAACCCCGAGTGCGAGT
CCCCATATAGATGCACAAAGACTCTCTGGGCCCCGATGGCAAGCGGGTTT
ACACCCTCAAGAAGGTTACCGAGGACGGTCGCGTTACCAAGAGTGCTCAC
CCCGCCCGTTTCTCTCCCGATGACAAGTACTCTCGGCACCGTGTGACCCT
CAAGAAGAGATACGGTCTGCTTATGACCCAGCAAGCCGGTATGAAACCCC
GAGTGCGAGTCCCCATATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030515snoRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0001522pseudouridine synthesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP10ASPNIDRAFT_189070Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_189070-T1.exon1ASPNIDRAFT_189070-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_189070-T1.exon2ASPNIDRAFT_189070-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_189070-T1.cdsASPNIDRAFT_189070-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_189070-T1ASPNIDRAFT_189070-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036756
DBxrefInterPro:IPR007264
DBxrefPFAM:PF04135
ProductsnoRNP complex protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1442003..1442284 +
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