You are here

Home

ASPNIDRAFT_190111-T1, ASPNIDRAFT_190111-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_190111-T1
Unique NameASPNIDRAFT_190111-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:500924..501842-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_190111-T1 ID=ASPNIDRAFT_190111-T1|Name=ASPNIDRAFT_190111-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=919bp|location=Sequence derived from alignment at ACJE01000005.1:500924..501842- (Aspergillus niger ATCC 1015)
ATGAGCGAACCAACCACAAGTACGGAAACTCCGCAGGATGGCATCAACCG
CCAGCTCAGCTGGTATGAGCCCGAGTTGGCGCAGGTCAAGGAGCCTGCAC
GTACCATTCTTGCCGAATACAGCAAGATTCCGGAGGAGAAGATCATTGAT
CACGTCAAACAAGTGGTAAGAGTATGCCCTTGATACAATCAAACGTATAC
TGAATAACGCTGGGTGCAACAGCGAGATCGCGCATTCGCCGTAGTAAGTC
TATACTCCCCGCAAACTAGTGACCATCCTTTACTGATCAGACAAGTTCCC
CTATCCATGTATCGGATCTTTCCGGTTCCTCGACATATCCATCTGCAACT
CATCTGCATACTCTGAAATCCTGTCCCGCTTGAAGGACACCTCCGACATC
TACCTGGACTTAGGCTGCGCCATGGGCCAAGACATCAGACACCTTGTACT
TCCCCCCCACAGCCAACAACCCCAGGACAGATACTGATCCAAGCAGGTCC
ACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGACCTCTACTCCAAA
TTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCGACACTCTCTCATG
CGAATTCATCACCAGCGACATCTTCGACGACAGCAGTGAACTATTCCAGC
GTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTCATTTTTCCACCTC
TTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGGTCATGAAGCTGAT
GAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCATGTGGGTGATTATA
ATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAACATTTGGCGCCAT
GATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGGGGAGGGAGACGGG
AACGGAGTGGAAGGTCGAT
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:500924..501842-

>ASPNIDRAFT_190111-T1 ID=ASPNIDRAFT_190111-T1|Name=ASPNIDRAFT_190111-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3036bp|location=Sequence derived from alignment at ACJE01000005.1:500924..501842- (Aspergillus niger ATCC 1015)
GTCCACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGACCTCTACTC
CAAATTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCGACACTCTCT
CATGCGAATTCATCACCAGCGACATCTTCGACGACAGCAGTGAACTATTC
CAGCGTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTCATTTTTCCA
CCTCTTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGGTCATGAAGC
TGATGAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCATGTGGGTGAT
TATAATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAACATTTGGCG
CCATGATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGGGGAGGGAGA
CGGGAACGGAGTGGAAGGTCGATTTCCCCTATCCATGTATCGGATCTTTC
CGGTTCCTCGACATATCCATCTGCAACTCATCTGCATACTCTGAAATCCT
GTCCCGCTTGAAGGACACCTCCGACATCTACCTGGACTTAGGCTGCGCCA
TGGGCCAAGACATCAGACACCTTCGAGATCGCGCATTCGCCGTAATGAGC
GAACCAACCACAAGTACGGAAACTCCGCAGGATGGCATCAACCGCCAGCT
CAGCTGGTATGAGCCCGAGTTGGCGCAGGTCAAGGAGCCTGCACGTACCA
TTCTTGCCGAATACAGCAAGATTCCGGAGGAGAAGATCATTGATCACGTC
AAACAAGTGGTCCACCAAGGAGCCCCTCAATCCCAAATCTATGGCTCAGA
CCTCTACTCCAAATTCATCGACTTGGGATACGAGCTCTTCGCGGACCGCG
ACACTCTCTCATGCGAATTCATCACCAGCGACATCTTCGACGACAGCAGT
GAACTATTCCAGCGTCTTGGGGAGAAGGTAGACATGATCAACGCGGCCTC
ATTTTTCCACCTCTTCGACTGGGATACCCAGGTAAAGCTGGCTAAGCAGG
TCATGAAGCTGATGAAGCCCAAGCCCGGGTCTATTGTGGTTGGTCGCCAT
GTGGGTGATTATAATGCCGGGGAGTTGGAGGCCAAAGAATTGGGCTCGAA
CATTTGGCGCCATGATTTGGATTCGTGGAGGAGGTTGTGGGAGCAGGTGG
GGAGGGAGACGGGAACGGAGTGGAAGGTCGATTTCCCCTATCCATGTATC
GGATCTTTCCGGTTCCTCGACATATCCATCTGCAACTCATCTGCATACTC
TGAAATCCTGTCCCGCTTGAAGGACACCTCCGACATCTACCTGGACTTAG
GCTGCGCCATGGGCCAAGACATCAGACACCTTCGAGATCGCGCATTCGCC
GTAATGAGCGAACCAACCACAAGTACGGAAACTCCGCAGGATGGCATCAA
CCGCCAGCTCAGCTGGTATGAGCCCGAGTTGGCGCAGGTCAAGGAGCCTG
CACGTACCATTCTTGCCGAATACAGCAAGATTCCGGAGGAGAAGATCATT
GATCACGTCAAACAAGTGGTCCACCAAGGAGCCCCTCAATCCCAAATCTA
TGGCTCAGACCTCTACTCCAAATTCATCGACTTGGGATACGAGCTCTTCG
CGGACCGCGACACTCTCTCATGCGAATTCATCACCAGCGACATCTTCGAC
GACAGCAGTGAACTATTCCAGCGTCTTGGGGAGAAGGTAGACATGATCAA
CGCGGCCTCATTTTTCCACCTCTTCGACTGGGATACCCAGGTAAAGCTGG
CTAAGCAGGTCATGAAGCTGATGAAGCCCAAGCCCGGGTCTATTGTGGTT
GGTCGCCATGTGGGTGATTATAATGCCGGGGAGTTGGAGGCCAAAGAATT
GGGCTCGAACATTTGGCGCCATGATTTGGATTCGTGGAGGAGGTTGTGGG
AGCAGGTGGGGAGGGAGACGGGAACGGAGTGGAAGGTCGATTTCCCCTAT
CCATGTATCGGATCTTTCCGGTTCCTCGACATATCCATCTGCAACTCATC
TGCATACTCTGAAATCCTGTCCCGCTTGAAGGACACCTCCGACATCTACC
TGGACTTAGGCTGCGCCATGGGCCAAGACATCAGACACCTTCGAGATCGC
GCATTCGCCGTAATGAGCGAACCAACCACAAGTACGGAAACTCCGCAGGA
TGGCATCAACCGCCAGCTCAGCTGGTATGAGCCCGAGTTGGCGCAGGTCA
AGGAGCCTGCACGTACCATTCTTGCCGAATACAGCAAGATTCCGGAGGAG
AAGATCATTGATCACGTCAAACAAGTGGTCCACCAAGGAGCCCCTCAATC
CCAAATCTATGGCTCAGACCTCTACTCCAAATTCATCGACTTGGGATACG
AGCTCTTCGCGGACCGCGACACTCTCTCATGCGAATTCATCACCAGCGAC
ATCTTCGACGACAGCAGTGAACTATTCCAGCGTCTTGGGGAGAAGGTAGA
CATGATCAACGCGGCCTCATTTTTCCACCTCTTCGACTGGGATACCCAGG
TAAAGCTGGCTAAGCAGGTCATGAAGCTGATGAAGCCCAAGCCCGGGTCT
ATTGTGGTTGGTCGCCATGTGGGTGATTATAATGCCGGGGAGTTGGAGGC
CAAAGAATTGGGCTCGAACATTTGGCGCCATGATTTGGATTCGTGGAGGA
GGTTGTGGGAGCAGGTGGGGAGGGAGACGGGAACGGAGTGGAAGGTCGAT
TTCCCCTATCCATGTATCGGATCTTTCCGGTTCCTCGACATATCCATCTG
CAACTCATCTGCATACTCTGAAATCCTGTCCCGCTTGAAGGACACCTCCG
ACATCTACCTGGACTTAGGCTGCGCCATGGGCCAAGACATCAGACACCTT
CGAGATCGCGCATTCGCCGTAATGAGCGAACCAACCACAAGTACGGAAAC
TCCGCAGGATGGCATCAACCGCCAGCTCAGCTGGTATGAGCCCGAGTTGG
CGCAGGTCAAGGAGCCTGCACGTACCATTCTTGCCGAATACAGCAAGATT
CCGGAGGAGAAGATCATTGATCACGTCAAACAAGTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190111ASPNIDRAFT_190111Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190111-T1ASPNIDRAFT_190111-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190111-T1.cdsASPNIDRAFT_190111-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_190111-T1.exon4ASPNIDRAFT_190111-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_190111-T1.exon3ASPNIDRAFT_190111-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_190111-T1.exon2ASPNIDRAFT_190111-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_190111-T1.exon1ASPNIDRAFT_190111-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000051.3
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR041698
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:500924..501842 -
Powered by Drupal