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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:998097..1000638+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_190556-T1 ID=ASPNIDRAFT_190556-T1|Name=ASPNIDRAFT_190556-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2542bp|location=Sequence derived from alignment at ACJE01000016.1:998097..1000638+ (Aspergillus niger ATCC 1015)
ATGCCTCCTCCGGAGCCCATCGAGCGCCCTCCTACTCCCCCGCCACCCCC
TCCGGAGGATTCCGCCCTCCCTCCGCCGCCGCCAGACACGTCCGCGCCTC
CTCCACCGCCGGAAGATCTTCCACCTGCGCCGCCGCCGGAGACTGAGCCC
AAGAAGAAGAAGGTTGGATGGGGCACGAAACGACCAGCCCCTACGCCGCT
GAGTGTGGAGGAACTCGTACGGAAGAAGCGAGAAGCTGATGCCGCAGCGG
CGAAGGTACGAATCAGCTCCGAGGATTCCATATAAGCTCAGATAGCTAAC
ATCCCACCTCTCTACACAGCCGAAATTTCTATCCAAGAAAGAACGAGAGA
AGCTCGCGCTGGAGAAACGGGCTCAAGAAGTCGCAGCAACCCGCAGACTA
AAATCCGAGCATGCCTCTAATGGCGTCGACAGAAGTGCTACGCACTCGCC
CTCTGTCAGCTCCGAGGGCCCTAACGGCGATGCGAGATCCATCCCCACTG
GCCCTCGGGCCATGCGCAACTCAGACGCTGCCCCGACTGCCCCGGCAGCT
ATGCGCCATTCACAGTCCCATAACAAGAACTACGACCTCGCGCCACCACC
TCCTCCGAAATCCATGTCCTTCGGTCTGACGAGCGGAAAGGGCGACAGCC
GGTTCGTGGACGAAGACGAGGCCGCAGCGCAAGCAGCCCTAGTGAAACAG
AGATACATGGGTGCCGACCAAACATCAAACTTCTCCGCCAAGAAGAAACG
CAAGAGAACCACAGACCGAAAATTCAACTTCGAGTGGAACGCCGAAGAAG
ACACCAGTGGCGATTACAACCCGCTATACCAACACCGACACGAAACCAAC
TTCTTCGGCCGTGGTCGCCTCGCCGGCTTCGGCGACGACGTCGCAGAATC
CGTCGCCCACAAATATGCCCGCGCCCTGGAAGACCGTGACCGCGAAGCAG
GAAGCATCCGCGCCAGAGAAATCCTCGAAATGGAGCGCCGCCGCCGAGAA
GAAAGCACCCGCAACCAGCTCGACAAACACTGGAGCGAGAAGAAACTCGA
GCACATGCGCGAACGCGACTGGCGTATCTTCAAGGAGGACTTCAACATCA
GCACCAAGGGCGGCAGCGTGCCCAACCCTATGCGCTCCTGGGACGAATCC
AACCTCCCCAAGCGCCTCATGGAGCTCATCAACCGCGTGGGCTACAAAGA
ACCCACGCCCATTCAACGCGCCGCCATCCCCATCGCCATGCAAAACCGCG
ACCTAATCGGTGTCGCCGTCACCGGTTCCGGTAAAACCGCCGCCTTCCTC
CTCCCCCTCCTCTGCTACATCGCGGAGCTCCCACGCATCGACGAATTCGA
ATGGCGCAAAGCCGACGGCCCCTACGCCATCGTCCTCGCGCCGACCCGCG
AACTGGCACAACAAATCGAAATCGAAGCCAAAAAATTTACTGGCCCGCTC
GGCTTCAACGTCGTCAGTATAGTCGGAGGTCACTCCCTCGAAGAACAAGC
CTACAGTCTCCGCGACGGCGCCGAAATCATCATCGCCACCCCCGGTCGTC
TCGTCGACTGCATCGAGCGCCGCATTCTCGTCCTCAGCCAATGCTGCTAC
GTCATCATGGACGAAGCTGACCGCATGATCGACCTGGGCTTCGAAGAACC
CGTCAACAAGATCCTCGACGCCCTCCCCGTCTCCAACGAAAAACCCGACT
CCGAAGACGCCGAAAACCCCCTCGCCATGTCCCGCCACATCAACCACGAC
CAGCACCGCTACCGCCAAACAATGATGTACACAGCCACCATGCCCACCGC
CGTCGAACGCATCGCCCGAAAATACCTCCGCCGTCCGGCAATCGTCACGA
TCGGCTCCGCCGGCGAAGCCGTCGACACCGTCGAGCAGCGCGTGGAAATG
ATCGCCGGCGAAGACAAGCGCAAGAAACGTCTCGGCGATATCCTCTCGTC
GGGAGAATTCCGCGCCCCGATCATCGTCTTCGTCAACATCAAGCGCAACT
GCGATGCCATCGCTCGCGAAATCAAACAGTGGGGATTCTCCTCCGTCACA
TTACACGGTAGTAAAACACAAGACCAGCGTGAAGCCGCCCTCGCGTCCGT
TAGGAATGGAACCACAGATGTCCTGGTGGCTACAGATCTGGCGGGTCGTG
GTATCGATGTGCCGGATGTTAGTCTCGTCGTGAACTTTAACATGGCGACG
AGTATTGAGAGCTATACGCATCGTATTGGTCGTACCGGTCGTGCCGGGAA
GAGTGGTGTGGCTATTACTTTCTTGGGTAATGAGGATGCGGATGTTATGT
ACGTGTTTCCCCCTCTCCCCTCTACTTATCTTATATTCTATGCCCTTGGC
GTTGTTATATTGTGGATGATACTAACAAGTGGGATTAGGTACGACCTCAA
GCAAATGCTCATGAAGTCGCCCATTTCTCGTGTTCCGGAGGAACTGCGTA
AACATGAGGCGGCGCAGTCGAAACCTACGAGGGGTTTCTCTTCCAAGAAG
AATAATGAGGAGGGTGGTGGTGGTGGGAAGGTGGGATGGTAA back to topCoding sequence (CDS) from alignment at ACJE01000016.1:998097..1000638+ >ASPNIDRAFT_190556-T1 ID=ASPNIDRAFT_190556-T1|Name=ASPNIDRAFT_190556-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7164bp|location=Sequence derived from alignment at ACJE01000016.1:998097..1000638+ (Aspergillus niger ATCC 1015)
ATGCCTCCTCCGGAGCCCATCGAGCGCCCTCCTACTCCCCCGCCACCCCC
TCCGGAGGATTCCGCCCTCCCTCCGCCGCCGCCAGACACGTCCGCGCCTC
CTCCACCGCCGGAAGATCTTCCACCTGCGCCGCCGCCGGAGACTGAGCCC
AAGAAGAAGAAGGTTGGATGGGGCACGAAACGACCAGCCCCTACGCCGCT
GAGTGTGGAGGAACTCGTACGGAAGAAGCGAGAAGCTGATGCCGCAGCGG
CGAAGCCGAAATTTCTATCCAAGAAAGAACGAGAGAAGCTCGCGCTGGAG
AAACGGGCTCAAGAAGTCGCAGCAACCCGCAGACTAAAATCCGAGCATGC
CTCTAATGGCGTCGACAGAAGTGCTACGCACTCGCCCTCTGTCAGCTCCG
AGGGCCCTAACGGCGATGCGAGATCCATCCCCACTGGCCCTCGGGCCATG
CGCAACTCAGACGCTGCCCCGACTGCCCCGGCAGCTATGCGCCATTCACA
GTCCCATAACAAGAACTACGACCTCGCGCCACCACCTCCTCCGAAATCCA
TGTCCTTCGGTCTGACGAGCGGAAAGGGCGACAGCCGGTTCGTGGACGAA
GACGAGGCCGCAGCGCAAGCAGCCCTAGTGAAACAGAGATACATGGGTGC
CGACCAAACATCAAACTTCTCCGCCAAGAAGAAACGCAAGAGAACCACAG
ACCGAAAATTCAACTTCGAGTGGAACGCCGAAGAAGACACCAGTGGCGAT
TACAACCCGCTATACCAACACCGACACGAAACCAACTTCTTCGGCCGTGG
TCGCCTCGCCGGCTTCGGCGACGACGTCGCAGAATCCGTCGCCCACAAAT
ATGCCCGCGCCCTGGAAGACCGTGACCGCGAAGCAGGAAGCATCCGCGCC
AGAGAAATCCTCGAAATGGAGCGCCGCCGCCGAGAAGAAAGCACCCGCAA
CCAGCTCGACAAACACTGGAGCGAGAAGAAACTCGAGCACATGCGCGAAC
GCGACTGGCGTATCTTCAAGGAGGACTTCAACATCAGCACCAAGGGCGGC
AGCGTGCCCAACCCTATGCGCTCCTGGGACGAATCCAACCTCCCCAAGCG
CCTCATGGAGCTCATCAACCGCGTGGGCTACAAAGAACCCACGCCCATTC
AACGCGCCGCCATCCCCATCGCCATGCAAAACCGCGACCTAATCGGTGTC
GCCGTCACCGGTTCCGGTAAAACCGCCGCCTTCCTCCTCCCCCTCCTCTG
CTACATCGCGGAGCTCCCACGCATCGACGAATTCGAATGGCGCAAAGCCG
ACGGCCCCTACGCCATCGTCCTCGCGCCGACCCGCGAACTGGCACAACAA
ATCGAAATCGAAGCCAAAAAATTTACTGGCCCGCTCGGCTTCAACGTCGT
CAGTATAGTCGGAGGTCACTCCCTCGAAGAACAAGCCTACAGTCTCCGCG
ACGGCGCCGAAATCATCATCGCCACCCCCGGTCGTCTCGTCGACTGCATC
GAGCGCCGCATTCTCGTCCTCAGCCAATGCTGCTACGTCATCATGGACGA
AGCTGACCGCATGATCGACCTGGGCTTCGAAGAACCCGTCAACAAGATCC
TCGACGCCCTCCCCGTCTCCAACGAAAAACCCGACTCCGAAGACGCCGAA
AACCCCCTCGCCATGTCCCGCCACATCAACCACGACCAGCACCGCTACCG
CCAAACAATGATGTACACAGCCACCATGCCCACCGCCGTCGAACGCATCG
CCCGAAAATACCTCCGCCGTCCGGCAATCGTCACGATCGGCTCCGCCGGC
GAAGCCGTCGACACCGTCGAGCAGCGCGTGGAAATGATCGCCGGCGAAGA
CAAGCGCAAGAAACGTCTCGGCGATATCCTCTCGTCGGGAGAATTCCGCG
CCCCGATCATCGTCTTCGTCAACATCAAGCGCAACTGCGATGCCATCGCT
CGCGAAATCAAACAGTGGGGATTCTCCTCCGTCACATTACACGGTAGTAA
AACACAAGACCAGCGTGAAGCCGCCCTCGCGTCCGTTAGGAATGGAACCA
CAGATGTCCTGGTGGCTACAGATCTGGCGGGTCGTGGTATCGATGTGCCG
GATGTTAGTCTCGTCGTGAACTTTAACATGGCGACGAGTATTGAGAGCTA
TACGCATCGTATTGGTCGTACCGGTCGTGCCGGGAAGAGTGGTGTGGCTA
TTACTTTCTTGGGTAATGAGGATGCGGATGTTATGTACGACCTCAAGCAA
ATGCTCATGAAGTCGCCCATTTCTCGTGTTCCGGAGGAACTGCGTAAACA
TGAGGCGGCGCAGTCGAAACCTACGAGGGGTTTCTCTTCCAAGAAGAATA
ATGAGGAGGGTGGTGGTGGTGGGAAGGTGGGATGGTAAATGCCTCCTCCG
GAGCCCATCGAGCGCCCTCCTACTCCCCCGCCACCCCCTCCGGAGGATTC
CGCCCTCCCTCCGCCGCCGCCAGACACGTCCGCGCCTCCTCCACCGCCGG
AAGATCTTCCACCTGCGCCGCCGCCGGAGACTGAGCCCAAGAAGAAGAAG
GTTGGATGGGGCACGAAACGACCAGCCCCTACGCCGCTGAGTGTGGAGGA
ACTCGTACGGAAGAAGCGAGAAGCTGATGCCGCAGCGGCGAAGCCGAAAT
TTCTATCCAAGAAAGAACGAGAGAAGCTCGCGCTGGAGAAACGGGCTCAA
GAAGTCGCAGCAACCCGCAGACTAAAATCCGAGCATGCCTCTAATGGCGT
CGACAGAAGTGCTACGCACTCGCCCTCTGTCAGCTCCGAGGGCCCTAACG
GCGATGCGAGATCCATCCCCACTGGCCCTCGGGCCATGCGCAACTCAGAC
GCTGCCCCGACTGCCCCGGCAGCTATGCGCCATTCACAGTCCCATAACAA
GAACTACGACCTCGCGCCACCACCTCCTCCGAAATCCATGTCCTTCGGTC
TGACGAGCGGAAAGGGCGACAGCCGGTTCGTGGACGAAGACGAGGCCGCA
GCGCAAGCAGCCCTAGTGAAACAGAGATACATGGGTGCCGACCAAACATC
AAACTTCTCCGCCAAGAAGAAACGCAAGAGAACCACAGACCGAAAATTCA
ACTTCGAGTGGAACGCCGAAGAAGACACCAGTGGCGATTACAACCCGCTA
TACCAACACCGACACGAAACCAACTTCTTCGGCCGTGGTCGCCTCGCCGG
CTTCGGCGACGACGTCGCAGAATCCGTCGCCCACAAATATGCCCGCGCCC
TGGAAGACCGTGACCGCGAAGCAGGAAGCATCCGCGCCAGAGAAATCCTC
GAAATGGAGCGCCGCCGCCGAGAAGAAAGCACCCGCAACCAGCTCGACAA
ACACTGGAGCGAGAAGAAACTCGAGCACATGCGCGAACGCGACTGGCGTA
TCTTCAAGGAGGACTTCAACATCAGCACCAAGGGCGGCAGCGTGCCCAAC
CCTATGCGCTCCTGGGACGAATCCAACCTCCCCAAGCGCCTCATGGAGCT
CATCAACCGCGTGGGCTACAAAGAACCCACGCCCATTCAACGCGCCGCCA
TCCCCATCGCCATGCAAAACCGCGACCTAATCGGTGTCGCCGTCACCGGT
TCCGGTAAAACCGCCGCCTTCCTCCTCCCCCTCCTCTGCTACATCGCGGA
GCTCCCACGCATCGACGAATTCGAATGGCGCAAAGCCGACGGCCCCTACG
CCATCGTCCTCGCGCCGACCCGCGAACTGGCACAACAAATCGAAATCGAA
GCCAAAAAATTTACTGGCCCGCTCGGCTTCAACGTCGTCAGTATAGTCGG
AGGTCACTCCCTCGAAGAACAAGCCTACAGTCTCCGCGACGGCGCCGAAA
TCATCATCGCCACCCCCGGTCGTCTCGTCGACTGCATCGAGCGCCGCATT
CTCGTCCTCAGCCAATGCTGCTACGTCATCATGGACGAAGCTGACCGCAT
GATCGACCTGGGCTTCGAAGAACCCGTCAACAAGATCCTCGACGCCCTCC
CCGTCTCCAACGAAAAACCCGACTCCGAAGACGCCGAAAACCCCCTCGCC
ATGTCCCGCCACATCAACCACGACCAGCACCGCTACCGCCAAACAATGAT
GTACACAGCCACCATGCCCACCGCCGTCGAACGCATCGCCCGAAAATACC
TCCGCCGTCCGGCAATCGTCACGATCGGCTCCGCCGGCGAAGCCGTCGAC
ACCGTCGAGCAGCGCGTGGAAATGATCGCCGGCGAAGACAAGCGCAAGAA
ACGTCTCGGCGATATCCTCTCGTCGGGAGAATTCCGCGCCCCGATCATCG
TCTTCGTCAACATCAAGCGCAACTGCGATGCCATCGCTCGCGAAATCAAA
CAGTGGGGATTCTCCTCCGTCACATTACACGGTAGTAAAACACAAGACCA
GCGTGAAGCCGCCCTCGCGTCCGTTAGGAATGGAACCACAGATGTCCTGG
TGGCTACAGATCTGGCGGGTCGTGGTATCGATGTGCCGGATGTTAGTCTC
GTCGTGAACTTTAACATGGCGACGAGTATTGAGAGCTATACGCATCGTAT
TGGTCGTACCGGTCGTGCCGGGAAGAGTGGTGTGGCTATTACTTTCTTGG
GTAATGAGGATGCGGATGTTATGTACGACCTCAAGCAAATGCTCATGAAG
TCGCCCATTTCTCGTGTTCCGGAGGAACTGCGTAAACATGAGGCGGCGCA
GTCGAAACCTACGAGGGGTTTCTCTTCCAAGAAGAATAATGAGGAGGGTG
GTGGTGGTGGGAAGGTGGGATGGTAAATGCCTCCTCCGGAGCCCATCGAG
CGCCCTCCTACTCCCCCGCCACCCCCTCCGGAGGATTCCGCCCTCCCTCC
GCCGCCGCCAGACACGTCCGCGCCTCCTCCACCGCCGGAAGATCTTCCAC
CTGCGCCGCCGCCGGAGACTGAGCCCAAGAAGAAGAAGGTTGGATGGGGC
ACGAAACGACCAGCCCCTACGCCGCTGAGTGTGGAGGAACTCGTACGGAA
GAAGCGAGAAGCTGATGCCGCAGCGGCGAAGCCGAAATTTCTATCCAAGA
AAGAACGAGAGAAGCTCGCGCTGGAGAAACGGGCTCAAGAAGTCGCAGCA
ACCCGCAGACTAAAATCCGAGCATGCCTCTAATGGCGTCGACAGAAGTGC
TACGCACTCGCCCTCTGTCAGCTCCGAGGGCCCTAACGGCGATGCGAGAT
CCATCCCCACTGGCCCTCGGGCCATGCGCAACTCAGACGCTGCCCCGACT
GCCCCGGCAGCTATGCGCCATTCACAGTCCCATAACAAGAACTACGACCT
CGCGCCACCACCTCCTCCGAAATCCATGTCCTTCGGTCTGACGAGCGGAA
AGGGCGACAGCCGGTTCGTGGACGAAGACGAGGCCGCAGCGCAAGCAGCC
CTAGTGAAACAGAGATACATGGGTGCCGACCAAACATCAAACTTCTCCGC
CAAGAAGAAACGCAAGAGAACCACAGACCGAAAATTCAACTTCGAGTGGA
ACGCCGAAGAAGACACCAGTGGCGATTACAACCCGCTATACCAACACCGA
CACGAAACCAACTTCTTCGGCCGTGGTCGCCTCGCCGGCTTCGGCGACGA
CGTCGCAGAATCCGTCGCCCACAAATATGCCCGCGCCCTGGAAGACCGTG
ACCGCGAAGCAGGAAGCATCCGCGCCAGAGAAATCCTCGAAATGGAGCGC
CGCCGCCGAGAAGAAAGCACCCGCAACCAGCTCGACAAACACTGGAGCGA
GAAGAAACTCGAGCACATGCGCGAACGCGACTGGCGTATCTTCAAGGAGG
ACTTCAACATCAGCACCAAGGGCGGCAGCGTGCCCAACCCTATGCGCTCC
TGGGACGAATCCAACCTCCCCAAGCGCCTCATGGAGCTCATCAACCGCGT
GGGCTACAAAGAACCCACGCCCATTCAACGCGCCGCCATCCCCATCGCCA
TGCAAAACCGCGACCTAATCGGTGTCGCCGTCACCGGTTCCGGTAAAACC
GCCGCCTTCCTCCTCCCCCTCCTCTGCTACATCGCGGAGCTCCCACGCAT
CGACGAATTCGAATGGCGCAAAGCCGACGGCCCCTACGCCATCGTCCTCG
CGCCGACCCGCGAACTGGCACAACAAATCGAAATCGAAGCCAAAAAATTT
ACTGGCCCGCTCGGCTTCAACGTCGTCAGTATAGTCGGAGGTCACTCCCT
CGAAGAACAAGCCTACAGTCTCCGCGACGGCGCCGAAATCATCATCGCCA
CCCCCGGTCGTCTCGTCGACTGCATCGAGCGCCGCATTCTCGTCCTCAGC
CAATGCTGCTACGTCATCATGGACGAAGCTGACCGCATGATCGACCTGGG
CTTCGAAGAACCCGTCAACAAGATCCTCGACGCCCTCCCCGTCTCCAACG
AAAAACCCGACTCCGAAGACGCCGAAAACCCCCTCGCCATGTCCCGCCAC
ATCAACCACGACCAGCACCGCTACCGCCAAACAATGATGTACACAGCCAC
CATGCCCACCGCCGTCGAACGCATCGCCCGAAAATACCTCCGCCGTCCGG
CAATCGTCACGATCGGCTCCGCCGGCGAAGCCGTCGACACCGTCGAGCAG
CGCGTGGAAATGATCGCCGGCGAAGACAAGCGCAAGAAACGTCTCGGCGA
TATCCTCTCGTCGGGAGAATTCCGCGCCCCGATCATCGTCTTCGTCAACA
TCAAGCGCAACTGCGATGCCATCGCTCGCGAAATCAAACAGTGGGGATTC
TCCTCCGTCACATTACACGGTAGTAAAACACAAGACCAGCGTGAAGCCGC
CCTCGCGTCCGTTAGGAATGGAACCACAGATGTCCTGGTGGCTACAGATC
TGGCGGGTCGTGGTATCGATGTGCCGGATGTTAGTCTCGTCGTGAACTTT
AACATGGCGACGAGTATTGAGAGCTATACGCATCGTATTGGTCGTACCGG
TCGTGCCGGGAAGAGTGGTGTGGCTATTACTTTCTTGGGTAATGAGGATG
CGGATGTTATGTACGACCTCAAGCAAATGCTCATGAAGTCGCCCATTTCT
CGTGTTCCGGAGGAACTGCGTAAACATGAGGCGGCGCAGTCGAAACCTAC
GAGGGGTTTCTCTTCCAAGAAGAATAATGAGGAGGGTGGTGGTGGTGGGA
AGGTGGGATGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261JWS |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | mRNA splicing protein prp28 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:998097..1000638 + |
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