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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:1179826..1181204+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_190616-T1 ID=ASPNIDRAFT_190616-T1|Name=ASPNIDRAFT_190616-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1379bp|location=Sequence derived from alignment at ACJE01000016.1:1179826..1181204+ (Aspergillus niger ATCC 1015)
ATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAA
GACTGTTGGGTACTTTACTAACTGGGTATGTTATAGCTTTAACTATTTGT
ATAAATCATTTGACTAATAAACGTGACAGGGAGTCTACGGCCGCAATTAC
CAACCTCAAGATATTCCTGCGGAGTATATCACTCACATTCTCTGTACGTT
CTATCCCAATTCTATCATAGCGCTAGTCTAACATCAATAGATTCCTTCGC
CAACATCCGCCCCACCGGCGAAGTGTACGTTTCACTCTTCCCCTCCAAAC
CAATCCACCAAGCTAACATTTAGAAATGTAGCTTCCTCACCGACACCTAC
TCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCCGGTAC
CAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAACAACACC
GCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTCCCAAC
TTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCCCGCAG
CGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACATCGACT
GGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACCTTTTG
CGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTTGGCGG
AAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAATATCC
AGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTGGAATCTG
ATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCATATGGC
GAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGCAGATG
GGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGAAGCTT
ATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGATGGGCC
TGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGGGTGT
GGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGG
CGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATGGTTAG
TTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAGTATATTGCCGGGA
GGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATCATGTT
TCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTAGGTT
GGGTGGGTTGGACGGTACGGAGAATACGTTGTATTATCCGCTGAGTCGCT
TTGAGAATTTGAGGAGGGGGTGTGTTTGA back to topCoding sequence (CDS) from alignment at ACJE01000016.1:1179826..1181204+ >ASPNIDRAFT_190616-T1 ID=ASPNIDRAFT_190616-T1|Name=ASPNIDRAFT_190616-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4884bp|location=Sequence derived from alignment at ACJE01000016.1:1179826..1181204+ (Aspergillus niger ATCC 1015)
ATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAA
GACTGTTGGGTACTTTACTAACTGGGGAGTCTACGGCCGCAATTACCAAC
CTCAAGATATTCCTGCGGAGTATATCACTCACATTCTCTATTCCTTCGCC
AACATCCGCCCCACCGGCGAAGTCTTCCTCACCGACACCTACTCCGACCT
CGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCT
ACGGATGCATCAAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTG
AAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGC
GCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGC
ACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTAT
CCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGT
GAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGAC
TGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTG
CGGATAGGCGATATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTA
TGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGT
TCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTG
ACGATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGAAGCTTATATTTGG
GTTGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGATGGGCCTGGGAGCG
GGTTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGGGGTGTGGGATTAT
AAGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCGGTTGAT
GGCCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATGGTTAGTTATGATA
CGCCGGAGGTGGCCGGGATGAAGACGGAGTATATTGCCGGGAGGAGGTTG
GGAGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATCATGTTTCGCATGA
GAGGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGTAGGTTGGGTGGGT
TGGACGGTACGGAGAATACGTTGTATTATCCGCTGAGTCGCTTTGAGAAT
TTGAGGAGGGGGTGTGTTTGAATGGCCCGTCCGCCGCCTCCGTGGATCAA
TGCCGGGAGACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAG
TCTACGGCCGCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACT
CACATTCTCTATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCT
CACCGACACCTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGT
CCGAGCCCGGTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTA
AAACAACAACACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGAC
CTACAGTCCCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAA
CCTTCGCCCGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGC
ATCGACATCGACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTT
TGTGCACCTTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCA
CCCATCTTGGCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGG
CCGGACAATATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGA
TTTCTGGAATCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTT
CCGGCCATATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCG
TTCTGTGCAGATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGA
TGCGAGGAAGCTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGG
GGACGGATGGGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGG
GAGAATGGGGTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGA
GGTGGTGGATGGGCGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGA
GGAAGATGGTTAGTTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAG
TATATTGCCGGGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGG
GGATCATCATGTTTCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGA
GGTTGGGTAGGTTGGGTGGGTTGGACGGTACGGAGAATACGTTGTATTAT
CCGCTGAGTCGCTTTGAGAATTTGAGGAGGGGGTGTGTTTGAATGGCCCG
TCCGCCGCCTCCGTGGATCAATGCCGGGAGACCGGGGTATAAGACTGTTG
GGTACTTTACTAACTGGGGAGTCTACGGCCGCAATTACCAACCTCAAGAT
ATTCCTGCGGAGTATATCACTCACATTCTCTATTCCTTCGCCAACATCCG
CCCCACCGGCGAAGTCTTCCTCACCGACACCTACTCCGACCTCGAAAAGC
ACTACCCAACCGATAGCTGGTCCGAGCCCGGTACCAACGCCTACGGATGC
ATCAAGCAACTCTACCTCCTAAAACAACAACACCGCCACCTGAAAACCCT
CCTTTCCATCGGCGGCTGGACCTACAGTCCCAACTTCGCCGCGCCAGCAT
CCACGCCCCGCGGTCGCGAAACCTTCGCCCGCAGCGCCGTGCACCTCCTC
GCGGACCTGGGCTTCGACGGCATCGACATCGACTGGGAGTATCCAGCCGA
TTCATCGCAAGCGATGGACTTTGTGCACCTTTTGCGGGATGTGAGGCGCG
TGCTGGACGAGTACTCCGCCACCCATCTTGGCGGAAAGAGACTGTTATTG
ACGATCGCGGCGCCGTGCGGGCCGGACAATATCCAGAAACTGCGGATAGG
CGATATGGATCCGTATCTTGATTTCTGGAATCTGATGTGTTATGATTTCA
GCGGGAGCTGGGATAAGTGTTCCGGCCATATGGCGAATGTGTTCCATTCG
GGGAGGGGGGAGATTACGCCGTTCTGTGCAGATGGGGCGGTGACGATGTA
TTTGAGGGGTGGGGTGAGGGATGCGAGGAAGCTTATATTTGGGTTGCCGT
TGTATGGAAGGGCTTTTGAGGGGACGGATGGGCCTGGGAGCGGGTTCCAG
GGTGTTGGGGAGGGGAGTTGGGAGAATGGGGTGTGGGATTATAAGGCTTT
GCCGTTGCAGGGGAGTCAGGAGGTGGTGGATGGGCGGTTGATGGCCAGTT
GGTGTTTTGATCCGGCGAAGAGGAAGATGGTTAGTTATGATACGCCGGAG
GTGGCCGGGATGAAGACGGAGTATATTGCCGGGAGGAGGTTGGGAGGAGC
TATGTGGTGGGAGTTGAGTGGGGATCATCATGTTTCGCATGAGAGGAGCT
TGGTTAAGGGGACTGCGGAGAGGTTGGGTAGGTTGGGTGGGTTGGACGGT
ACGGAGAATACGTTGTATTATCCGCTGAGTCGCTTTGAGAATTTGAGGAG
GGGGTGTGTTTGAATGGCCCGTCCGCCGCCTCCGTGGATCAATGCCGGGA
GACCGGGGTATAAGACTGTTGGGTACTTTACTAACTGGGGAGTCTACGGC
CGCAATTACCAACCTCAAGATATTCCTGCGGAGTATATCACTCACATTCT
CTATTCCTTCGCCAACATCCGCCCCACCGGCGAAGTCTTCCTCACCGACA
CCTACTCCGACCTCGAAAAGCACTACCCAACCGATAGCTGGTCCGAGCCC
GGTACCAACGCCTACGGATGCATCAAGCAACTCTACCTCCTAAAACAACA
ACACCGCCACCTGAAAACCCTCCTTTCCATCGGCGGCTGGACCTACAGTC
CCAACTTCGCCGCGCCAGCATCCACGCCCCGCGGTCGCGAAACCTTCGCC
CGCAGCGCCGTGCACCTCCTCGCGGACCTGGGCTTCGACGGCATCGACAT
CGACTGGGAGTATCCAGCCGATTCATCGCAAGCGATGGACTTTGTGCACC
TTTTGCGGGATGTGAGGCGCGTGCTGGACGAGTACTCCGCCACCCATCTT
GGCGGAAAGAGACTGTTATTGACGATCGCGGCGCCGTGCGGGCCGGACAA
TATCCAGAAACTGCGGATAGGCGATATGGATCCGTATCTTGATTTCTGGA
ATCTGATGTGTTATGATTTCAGCGGGAGCTGGGATAAGTGTTCCGGCCAT
ATGGCGAATGTGTTCCATTCGGGGAGGGGGGAGATTACGCCGTTCTGTGC
AGATGGGGCGGTGACGATGTATTTGAGGGGTGGGGTGAGGGATGCGAGGA
AGCTTATATTTGGGTTGCCGTTGTATGGAAGGGCTTTTGAGGGGACGGAT
GGGCCTGGGAGCGGGTTCCAGGGTGTTGGGGAGGGGAGTTGGGAGAATGG
GGTGTGGGATTATAAGGCTTTGCCGTTGCAGGGGAGTCAGGAGGTGGTGG
ATGGGCGGTTGATGGCCAGTTGGTGTTTTGATCCGGCGAAGAGGAAGATG
GTTAGTTATGATACGCCGGAGGTGGCCGGGATGAAGACGGAGTATATTGC
CGGGAGGAGGTTGGGAGGAGCTATGTGGTGGGAGTTGAGTGGGGATCATC
ATGTTTCGCATGAGAGGAGCTTGGTTAAGGGGACTGCGGAGAGGTTGGGT
AGGTTGGGTGGGTTGGACGGTACGGAGAATACGTTGTATTATCCGCTGAG
TCGCTTTGAGAATTTGAGGAGGGGGTGTGTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0008061 | chitin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH18 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001579 |
| DBxref | InterPro:IPR029070 |
| DBxref | InterPro:IPR001223 |
| DBxref | InterPro:IPR011583 |
| DBxref | PFAM:PF00704 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:1179826..1181204 + |
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