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ASPNIDRAFT_191589-T1, ASPNIDRAFT_191589-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_191589-T1
Unique NameASPNIDRAFT_191589-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:1022994..1024050-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_191589-T1 ID=ASPNIDRAFT_191589-T1|Name=ASPNIDRAFT_191589-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1057bp|location=Sequence derived from alignment at ACJE01000015.1:1022994..1024050- (Aspergillus niger ATCC 1015)
ATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGC
AACCACGTCCATCTCCATTGTATGTCTTCAATTCGTCCTCGTGCGGTGGT
TAGGATCCGCTGCTAATCACCTTTTCTTCGTTTAGTTGGCTTGGTTGATC
GCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTA
TTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGCATGGCGC
TTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGGTATGTTAC
CATCCCTCCTGAATCAATCTTTTGACAACCCTTCGTACTGATTTATGGCA
GATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCATCA
ACACGTTAGTCTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGCTGGG
TTCATTCTTTTGGCTATGGTTATTGTAAGTGATAACCAGCTCCGACACAC
ATACCCACTAGGCAGTACGTGACTTACCATTAATGCAGATCATTTGGATT
TTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTC
ATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAATGGCAGACCTA
TGTCAACTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCG
CAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGT
GTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGC
AGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCA
CCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCGTGCGAAGGCGAT
CTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATCAGTTTCACCA
AGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCC
AGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAACTACCTGATCTT
GCTGTGA
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Coding sequence (CDS) from alignment at ACJE01000015.1:1022994..1024050-

>ASPNIDRAFT_191589-T1 ID=ASPNIDRAFT_191589-T1|Name=ASPNIDRAFT_191589-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3468bp|location=Sequence derived from alignment at ACJE01000015.1:1022994..1024050- (Aspergillus niger ATCC 1015)
ATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGG
CTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAA
ATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATCC
AGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGAC
CTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACC
GCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCC
AACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCG
TGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGA
TCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGA
TGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAA
CTACCTGATCTTGCTGTGAATCGTGGGGTATCTTTCCGCTGGTCTTGTTA
TCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATCG
CAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTTTGGCTTG
GTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATC
CCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGGC
ATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGAT
GGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCAA
CCACGTCCATCTCCATTATCATTTGGATTTTCTACTTCGGATCTAGCCCT
CAGGCTTCGCATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGG
TGCTGGCTCGTACGGAAATGGCAGACCTATGTCAACTGCATTCGGCAATC
GACCCGAGACGACATCCAGCCAGCCCCCGCAGATGTACACGTCCGCTCAA
CTCAACGGCTTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGC
CCCCGGCTCCGAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGT
CCGCTACGAATCTGCCCAACAATGGCGCACCAGATGAAGTCCCCCAGCCC
ACGGAATATCCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCC
TGAAGATGCCAATGAGATCAGTTTCACCAAGCATGAGATCTTGGAGGTGT
CCGATGTGAGCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACC
GGTATTGCTCCATCCAACTACCTGATCTTGCTGTGAATCGTGGGGTATCT
TTCCGCTGGTCTTGTTATCACAACAATCTCCATCAACACGTTAGTCTATG
CAAACAGCGCCGCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCT
ATGGTTATTTTGGCTTGGTTGATCGCATTTATCTCCTCCATTGTCACTGG
CGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGTTGCTTACTCAT
TTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCC
GTCTATAACATAGCGATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGA
CCCCTTTGCGCTCGCAACCACGTCCATCTCCATTATCATTTGGATTTTCT
ACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCATTT
GCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAATGGCAGACCTATGTC
AACTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCGCAGA
TGTACACGTCCGCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGTCG
GGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGCAGCC
CCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCACCAG
ATGAAGTCCCCCAGCCCACGGAATATCCGTACCGTGCGAAGGCGATCTAT
TCGTATGAGGCCAACCCTGAAGATGCCAATGAGATCAGTTTCACCAAGCA
TGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAGGA
AGGCCACCGGAGAGACCGGTATTGCTCCATCCAACTACCTGATCTTGCTG
TGAATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCAT
CAACACGTTAGTCTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGCTG
GGTTCATTCTTTTGGCTATGGTTATTTTGGCTTGGTTGATCGCATTTATC
TCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGGTG
GGCTGTTGCTTACTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCG
GCACCGATACTGGTGCCGTCTATAACATAGCGATGGCGCGCTTCAGAGCC
AGCAATATTCTGGGCGACCCCTTTGCGCTCGCAACCACGTCCATCTCCAT
TATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCG
GCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGA
AATGGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATC
CAGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGA
CCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACAC
CGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCC
CAACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACC
GTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAG
ATCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAG
ATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCA
ACTACCTGATCTTGCTGTGAATCGTGGGGTATCTTTCCGCTGGTCTTGTT
ATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATC
GCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTTTGGCTT
GGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATAT
CCCACCTATTCATGGTGGGCTGTTGCTTACTCATTTTGCTGCATTGTCGG
CATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGA
TGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCA
ACCACGTCCATCTCCATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SHO1ASPNIDRAFT_191589Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191589-T1ASPNIDRAFT_191589-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191589-T1.cdsASPNIDRAFT_191589-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191589-T1.exon4ASPNIDRAFT_191589-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191589-T1.exon3ASPNIDRAFT_191589-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191589-T1.exon2ASPNIDRAFT_191589-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191589-T1.exon1ASPNIDRAFT_191589-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR035522
DBxrefInterPro:IPR001452
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
ProductTransmembrane osmosensor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:1022994..1024050 -
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