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ASPNIDRAFT_191792-T1, ASPNIDRAFT_191792-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_191792-T1
Unique NameASPNIDRAFT_191792-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:227727..229117+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_191792-T1 ID=ASPNIDRAFT_191792-T1|Name=ASPNIDRAFT_191792-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1391bp|location=Sequence derived from alignment at ACJE01000003.1:227727..229117+ (Aspergillus niger ATCC 1015)
ATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCAT
CATTGATGGTGTGGGATCCGGAGGTGATTATCATAATGTATGCTCAGCAG
CGCCCGGATAATGATGAGCAGATCGCTAAATTTCTCCATTTCAACAGGTC
AAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCG
CTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGG
GCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCC
ACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGA
GCGCTTCCTGCTTGGTGCTGGTATGAGCTATCAATATATCAGTCTACTGA
GAATGAGCCAGGCTAATTTGTATCTCATCTTCTAGACCCCAGAGATACCA
ATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGAAAA
GGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGACCT
TCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCGCTA
CCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCGGCC
AAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGA
CGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGCAGC
GGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATGTCC
CTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGG
AATCAACATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCGACG
GTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACCGGA
GAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAA
CTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGGAGT
TGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCT
CACGCATCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAATAC
ACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGACACACTGTTGAGC
CCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGATAC
CTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCC
TGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCCAAA
AGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACT
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Coding sequence (CDS) from alignment at ACJE01000003.1:227727..229117+

>ASPNIDRAFT_191792-T1 ID=ASPNIDRAFT_191792-T1|Name=ASPNIDRAFT_191792-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3798bp|location=Sequence derived from alignment at ACJE01000003.1:227727..229117+ (Aspergillus niger ATCC 1015)
ATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCAT
CATTGATGGTGTGGGATCCGGAGGTGATTATCATAATGTCAAAGGAGGTC
ACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAA
TACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTG
CGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCG
GTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTG
CTTGGTGCTGACCCCAGAGATACCAATGACCTGTTCGAGAAGATGTACCG
GGGATCGATGTTCTATGGCAGAAAAGGTCTCCCTGTTGCCGTCATCTCAG
TGATTGATTTGGCTATCTGGGACCTTCTGGGCAAGATTCGCAACGAACCC
GTTTACAAGCTCATTGGCGGCGCTACCCGTTCGCGTCTGGACTTCTACTG
CACTGGACCCCAGCCCGCTTCGGCCAAGGCCATGGGTTTCTCCGGAGCCA
AGGTCGCTCTTCCCCATGGCCCTGACGAGGGTACGGAAGGACTCTTGAAG
AACGTCGACTACCTCCGCAAGCAGCGGGAATCAGTCGGTCCCAACTTCCC
TCTGCGGGTCGACTGCTACATGTCCCTGAACGTTCCATACACAATTGAGC
TGGTCAAGCGTTGTGAGGCGGAAGGAATCAACATTGACTGGTGGGAAGAA
TGCTTGACCCCGGATGACTTCGACGGTCATGCGCTTTTGAAGAGAGCCCA
CCCCACTGTCAAGTTCACCACCGGAGAGCACGAGTACTCACGGTACGGTT
TCCGAAAGCTCGTGGAGGGCCGTAACTTGGACATTCTGCAGCCGGATGTC
ATGTGGGTCGGTGGTATGACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAG
TGCCTACGACCTCCCCGTTGTTCCTCACGCATCTGGACCTTACTCCTACC
ACTTTGTGGTTTCGCAACCCAATACACCCTTCCAGGAATACCTCGCCAAC
TCTGCAGATGGACACACTGTTGAGCCCGTCTTCGGAAACCTCTTCCTCAA
CGAGCCGATCCCTACTAAGGGATACCTGGATGTATCGATCCTGGACAAGC
CGGGCTTCGGCCTCGAGCTAAACCCTGCTGCGTCTCTTATCCCAGCAGCT
TCAATTCTCACTCCTGCACCCCAAAAGGCACTGGTTGCTCCAACTGAGAA
CCAGCAGGAGTCTACTATGGGTTCTACCGGACAATTTCCCCGCATCAAAG
AGATCCGCACCTTCATCATTGATGGTGTGGGATCCGGAGGTGATTATCAT
AATGTCAAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCCCAT
GACTCGCTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTAACG
TCCTGGGCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAGGGA
TTTGCCACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACA
CTTTGAGCGCTTCCTGCTTGGTGCTGACCCCAGAGATACCAATGACCTGT
TCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGAAAAGGTCTCCCT
GTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGACCTTCTGGGCAA
GATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCGCTACCCGTTCGC
GTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCGGCCAAGGCCATG
GGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGACGAGGGTAC
GGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGCAGCGGGAATCAG
TCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATGTCCCTGAACGTT
CCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGGAATCAACAT
TGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCGACGGTCATGCGC
TTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACCGGAGAGCACGAG
TACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAACTTGGACAT
TCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGGAGTTGCTCAAGG
TCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCTCACGCATCT
GGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAATACACCCTTCCA
GGAATACCTCGCCAACTCTGCAGATGGACACACTGTTGAGCCCGTCTTCG
GAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGATACCTGGATGTA
TCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCCTGCTGCGTC
TCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCCAAAAGGCACTGG
TTGCTCCAACTGAGAACCAGCAGGAGTCTACTATGGGTTCTACCGGACAA
TTTCCCCGCATCAAAGAGATCCGCACCTTCATCATTGATGGTGTGGGATC
CGGAGGTGATTATCATAATGTCAAAGGAGGTCACTGGTTGATTGACAGTA
ACATCTCCACCCCCATGACTCGCTGGGCACAATACCGTGGCTCTCGCACA
TCATGGGGTATTAACGTCCTGGGCTCTTTCTGCGTCGAGATTGAAGCTAC
CGACGGGACTAAGGGATTTGCCACGGGATTCGGTGGTCCCCCAGCTTGTT
GGCTGGTCCATCAACACTTTGAGCGCTTCCTGCTTGGTGCTGACCCCAGA
GATACCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGG
CAGAAAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCT
GGGACCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGC
GGCGCTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGC
TTCGGCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATG
GCCCTGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGC
AAGCAGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTA
CATGTCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGG
CGGAAGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCCCGGATGAC
TTCGACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCAC
CACCGGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGG
GCCGTAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATG
ACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGT
TGTTCCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAAC
CCAATACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGACACACT
GTTGAGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAA
GGGATACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGC
TAAACCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCA
CCCCAAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050032L-rhamnonate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191792ASPNIDRAFT_191792Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191792-T1.exon1ASPNIDRAFT_191792-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191792-T1.exon2ASPNIDRAFT_191792-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_191792-T1.exon3ASPNIDRAFT_191792-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191792-T1.cdsASPNIDRAFT_191792-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_191792-T1ASPNIDRAFT_191792-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023444
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:227727..229117 +
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