You are here

Home

ASPNIDRAFT_192370-T1, ASPNIDRAFT_192370-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_192370-T1
Unique NameASPNIDRAFT_192370-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:917713..918457+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_192370-T1 ID=ASPNIDRAFT_192370-T1|Name=ASPNIDRAFT_192370-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=745bp|location=Sequence derived from alignment at ACJE01000003.1:917713..918457+ (Aspergillus niger ATCC 1015)
ATGGCTTCACTGTCTCCTGTACAGGATGGCATCAAGCAGGTAACGCGGAA
GGAATTATACACCGATTTCAGTAAACGGATGGACTTTCTGCGGTTGTTCC
TGGACTTCACAGACGGTATGATCTAGTCTGCTAAGGGACGAGCCAGAGTA
CTGATCGCTGGCCAGATGATATTATCGTCTTCAACAAAGGTGCCAAGTTT
CTCAAGGCGGCCTTACCAGTTCTCACTCACCGTCTATACGCGAAAATGCT
CGACTTCGACATAACAGCCCGCGCCTTGCGGGTTCGAAGCACGGAATCCG
AAGCCCAAGTCGACGAATACTTCACTCTGGACGGTCCGCACGTGCAGCGG
AGGAAGATCTTCTGGAAGTGGTATTTGACCCGATTATTTTCCGACCCCAG
CCGTCTCGAATATTGGGAGTACCTGGATAAGGTTGGGTAAGTCTACTGAG
CTGATCTCCTCATGCAGACCCTCGTGAACAAATTCGGGCAAATGTACTGA
TTCCATGTTGGGGATTCAGAAAGATGCACACAGGTAAAATCTTGATGCAC
CCACTGAAGATCGAGTACATGCATATGAACACGTGCCTGGGGTACGTCAA
GGAGCTCGCATACGAGACCATATCCGGACATCCAGAGATGTCGTATCCGT
TCAAATTCGCTCTGATCAGAGCGCTTAACAAAATCATGACCATCCAAAAC
GACTTGATTTCGAGGTGTTATATTCGCGAAGGCCAAGAGTTTGAC
back to top

Coding sequence (CDS) from alignment at ACJE01000003.1:917713..918457+

>ASPNIDRAFT_192370-T1 ID=ASPNIDRAFT_192370-T1|Name=ASPNIDRAFT_192370-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1830bp|location=Sequence derived from alignment at ACJE01000003.1:917713..918457+ (Aspergillus niger ATCC 1015)
ATGGCTTCACTGTCTCCTGTACAGGATGGCATCAAGCAGGTAACGCGGAA
GGAATTATACACCGATTTCAGTAAACGGATGGACTTTCTGCGGTTGTTCC
TGGACTTCACAGACGATGATATTATCGTCTTCAACAAAGGTGCCAAGTTT
CTCAAGGCGGCCTTACCAGTTCTCACTCACCGTCTATACGCGAAAATGCT
CGACTTCGACATAACAGCCCGCGCCTTGCGGGTTCGAAGCACGGAATCCG
AAGCCCAAGTCGACGAATACTTCACTCTGGACGGTCCGCACGTGCAGCGG
AGGAAGATCTTCTGGAAGTGGTATTTGACCCGATTATTTTCCGACCCCAG
CCGTCTCGAATATTGGGAGTACCTGGATAAGGTTGGAAAGATGCACACAG
GTAAAATCTTGATGCACCCACTGAAGATCGAGTACATGCATATGAACACG
TGCCTGGGGTACGTCAAGGAGCTCGCATACGAGACCATATCCGGACATCC
AGAGATGTCGTATCCGTTCAAATTCGCTCTGATCAGAGCGCTTAACAAAA
TCATGACCATCCAAAACGACTTGATTTCGAGGTGTTATATTCGCGAAGGC
CAAGAGTTTGATGGCTTCACTGTCTCCTGTACAGGATGGCATCAAGCAGG
TAACGCGGAAGGAATTATACACCGATTTCAGTAAACGGATGGACTTTCTG
CGGTTGTTCCTGGACTTCACAGACGATGATATTATCGTCTTCAACAAAGG
TGCCAAGTTTCTCAAGGCGGCCTTACCAGTTCTCACTCACCGTCTATACG
CGAAAATGCTCGACTTCGACATAACAGCCCGCGCCTTGCGGGTTCGAAGC
ACGGAATCCGAAGCCCAAGTCGACGAATACTTCACTCTGGACGGTCCGCA
CGTGCAGCGGAGGAAGATCTTCTGGAAGTGGTATTTGACCCGATTATTTT
CCGACCCCAGCCGTCTCGAATATTGGGAGTACCTGGATAAGGTTGGAAAG
ATGCACACAGGTAAAATCTTGATGCACCCACTGAAGATCGAGTACATGCA
TATGAACACGTGCCTGGGGTACGTCAAGGAGCTCGCATACGAGACCATAT
CCGGACATCCAGAGATGTCGTATCCGTTCAAATTCGCTCTGATCAGAGCG
CTTAACAAAATCATGACCATCCAAAACGACTTGATTTCGAGGTGTTATAT
TCGCGAAGGCCAAGAGTTTGATGGCTTCACTGTCTCCTGTACAGGATGGC
ATCAAGCAGGTAACGCGGAAGGAATTATACACCGATTTCAGTAAACGGAT
GGACTTTCTGCGGTTGTTCCTGGACTTCACAGACGATGATATTATCGTCT
TCAACAAAGGTGCCAAGTTTCTCAAGGCGGCCTTACCAGTTCTCACTCAC
CGTCTATACGCGAAAATGCTCGACTTCGACATAACAGCCCGCGCCTTGCG
GGTTCGAAGCACGGAATCCGAAGCCCAAGTCGACGAATACTTCACTCTGG
ACGGTCCGCACGTGCAGCGGAGGAAGATCTTCTGGAAGTGGTATTTGACC
CGATTATTTTCCGACCCCAGCCGTCTCGAATATTGGGAGTACCTGGATAA
GGTTGGAAAGATGCACACAGGTAAAATCTTGATGCACCCACTGAAGATCG
AGTACATGCATATGAACACGTGCCTGGGGTACGTCAAGGAGCTCGCATAC
GAGACCATATCCGGACATCCAGAGATGTCGTATCCGTTCAAATTCGCTCT
GATCAGAGCGCTTAACAAAATCATGACCATCCAAAACGACTTGATTTCGA
GGTGTTATATTCGCGAAGGCCAAGAGTTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0019825oxygen binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192370ASPNIDRAFT_192370Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192370-T1.exon1ASPNIDRAFT_192370-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192370-T1.exon2ASPNIDRAFT_192370-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192370-T1.exon3ASPNIDRAFT_192370-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192370-T1.cdsASPNIDRAFT_192370-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192370-T1.utr3p1ASPNIDRAFT_192370-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192370-T1ASPNIDRAFT_192370-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012292
DBxrefPFAM:PF11563
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:917713..918457 +
Powered by Drupal