You are here

Home

ASPNIDRAFT_192711-T1, ASPNIDRAFT_192711-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_192711-T1
Unique NameASPNIDRAFT_192711-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:488548..489569+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_192711-T1 ID=ASPNIDRAFT_192711-T1|Name=ASPNIDRAFT_192711-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1022bp|location=Sequence derived from alignment at ACJE01000012.1:488548..489569+ (Aspergillus niger ATCC 1015)
ATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCCCGGAGCCGAATT
CACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGGCGCCGACGCCTT
TGTTCCCGGTATGTTTTGGGCTGATGTGATGTGATGTGATATATTTGCTT
CTTTGTCCGTTTGCTTTTGTGACACGGTATTTTCTTCGTTGCTGTTGCGT
CTACCAGCGTCGTTTACATCACCCTGTTGCTATAGCATTCTGGCTTGCTG
TTACTTCTTCTTCTACAATAAGAGAAAAGGACAGGTTCTAATCATGTCTC
TCTACAACCAGAAATACACCGTCCCCCGCGCCAGACCTCTCACCTCGCAG
GAACAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACGGTTCCACGA
TGGCCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGATGAAGAAGG
ATAGCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATGCCTAGTTAT
TCGGGCAAGTATCAGAAGAAGAAGAGGGCGTTGCCGAGGTTACAGGGGAG
ACAGTATGGTGAGTTTGTCCATTATTTTTCATGAACGACGTGAGAGATAT
GTGCTAATGAGATCGTCTTTGTAGTGATGAAGTTCTTCCCCCGGGAATTG
TGGCAGACAATTCAGCCGACGTTCAAGCCCGATGCCGCGATGGATGGGTA
CGTGCCGCAGGTGGCGCGGGCCGGGGTGAAGCGGGGATTCGAGGACGATG
ATGAAGAGGAAGATGAGGATGCGGCGAAGCGGGCGAAGGCTGGTGGTGAG
GAGGGTGAAGGAGCTGAGGATGATGATGACGGGGACGGGGATATCCTGGA
TCCGGAGGAGGAGCAAGAAGGGGAGGAGGAGATTGAAGATGATGACTTTG
AGGATGATGATGATGAGATGGGTGGGGATTATAACGCTGAGCAGTACTTT
GATGGTGGTGATGATGAGTATGGGGATGATGGGTTCGGAGATGGTGGTGG
TGGAGGGGAGGAGGATACTTAT
back to top

Coding sequence (CDS) from alignment at ACJE01000012.1:488548..489569+

>ASPNIDRAFT_192711-T1 ID=ASPNIDRAFT_192711-T1|Name=ASPNIDRAFT_192711-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2259bp|location=Sequence derived from alignment at ACJE01000012.1:488548..489569+ (Aspergillus niger ATCC 1015)
ATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCCCGGAGCCGAATT
CACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGGCGCCGACGCCTT
TGTTCCCGAAATACACCGTCCCCCGCGCCAGACCTCTCACCTCGCAGGAA
CAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACGGTTCCACGATGG
CCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGATGAAGAAGGATA
GCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATGCCTAGTTATTCG
GGCAAGTATCAGAAGAAGAAGAGGGCGTTGCCGAGGTTACAGGGGAGACA
GTATGTGATGAAGTTCTTCCCCCGGGAATTGTGGCAGACAATTCAGCCGA
CGTTCAAGCCCGATGCCGCGATGGATGGGTACGTGCCGCAGGTGGCGCGG
GCCGGGGTGAAGCGGGGATTCGAGGACGATGATGAAGAGGAAGATGAGGA
TGCGGCGAAGCGGGCGAAGGCTGGTGGTGAGGAGGGTGAAGGAGCTGAGG
ATGATGATGACGGGGACGGGGATATCCTGGATCCGGAGGAGGAGCAAGAA
GGGGAGGAGGAGATTGAAGATGATGACTTTGAGGATGATGATGATGAGAT
GGGTGGGGATTATAACGCTGAGCAGTACTTTGATGGTGGTGATGATGAGT
ATGGGGATGATGGGTTCGGAGATGGTGGTGGTGGAGGGGAGGAGGATACT
TATATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCCCGGAGCCGA
ATTCACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGGCGCCGACGC
CTTTGTTCCCGAAATACACCGTCCCCCGCGCCAGACCTCTCACCTCGCAG
GAACAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACGGTTCCACGA
TGGCCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGATGAAGAAGG
ATAGCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATGCCTAGTTAT
TCGGGCAAGTATCAGAAGAAGAAGAGGGCGTTGCCGAGGTTACAGGGGAG
ACAGTATGTGATGAAGTTCTTCCCCCGGGAATTGTGGCAGACAATTCAGC
CGACGTTCAAGCCCGATGCCGCGATGGATGGGTACGTGCCGCAGGTGGCG
CGGGCCGGGGTGAAGCGGGGATTCGAGGACGATGATGAAGAGGAAGATGA
GGATGCGGCGAAGCGGGCGAAGGCTGGTGGTGAGGAGGGTGAAGGAGCTG
AGGATGATGATGACGGGGACGGGGATATCCTGGATCCGGAGGAGGAGCAA
GAAGGGGAGGAGGAGATTGAAGATGATGACTTTGAGGATGATGATGATGA
GATGGGTGGGGATTATAACGCTGAGCAGTACTTTGATGGTGGTGATGATG
AGTATGGGGATGATGGGTTCGGAGATGGTGGTGGTGGAGGGGAGGAGGAT
ACTTATATGTCCCGATTCGGCGCAAAGAAAGGCAGAAAGCTCCCCGGAGC
CGAATTCACTTGGGAGGCAGATCCCAGCGGAGAACCTGATACGGCGCCGA
CGCCTTTGTTCCCGAAATACACCGTCCCCCGCGCCAGACCTCTCACCTCG
CAGGAACAATTGCAGGTGGATTTCTATCGTACTCTCCGGGAACGGTTCCA
CGATGGCCCGTATTACTCGATTCTGGAGGGGGCGGGGTCGACGATGAAGA
AGGATAGCGCGGCGCGGGTGAACTTCGATCCGTTTCATGGCATGCCTAGT
TATTCGGGCAAGTATCAGAAGAAGAAGAGGGCGTTGCCGAGGTTACAGGG
GAGACAGTATGTGATGAAGTTCTTCCCCCGGGAATTGTGGCAGACAATTC
AGCCGACGTTCAAGCCCGATGCCGCGATGGATGGGTACGTGCCGCAGGTG
GCGCGGGCCGGGGTGAAGCGGGGATTCGAGGACGATGATGAAGAGGAAGA
TGAGGATGCGGCGAAGCGGGCGAAGGCTGGTGGTGAGGAGGGTGAAGGAG
CTGAGGATGATGATGACGGGGACGGGGATATCCTGGATCCGGAGGAGGAG
CAAGAAGGGGAGGAGGAGATTGAAGATGATGACTTTGAGGATGATGATGA
TGAGATGGGTGGGGATTATAACGCTGAGCAGTACTTTGATGGTGGTGATG
ATGAGTATGGGGATGATGGGTTCGGAGATGGTGGTGGTGGAGGGGAGGAG
GATACTTAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006383transcription by RNA polymerase III
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192711ASPNIDRAFT_192711Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192711-T1.exon1ASPNIDRAFT_192711-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192711-T1.exon2ASPNIDRAFT_192711-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192711-T1.exon3ASPNIDRAFT_192711-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192711-T1.cdsASPNIDRAFT_192711-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192711-T1ASPNIDRAFT_192711-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR024661
DBxrefPFAM:PF11705
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:488548..489569 +
Powered by Drupal