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ASPNIDRAFT_192778-T1, ASPNIDRAFT_192778-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_192778-T1
Unique NameASPNIDRAFT_192778-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:644517..645176+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_192778-T1 ID=ASPNIDRAFT_192778-T1|Name=ASPNIDRAFT_192778-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=660bp|location=Sequence derived from alignment at ACJE01000012.1:644517..645176+ (Aspergillus niger ATCC 1015)
ATGGTACCACCCCCGAAACTCCCTCTCCCCAAACCATCCCTATCCCCCTC
CTCCACATCCCCATCCACCCGCTGGCTCGCCATCCAAACCCGCGACCCCA
AATTTACCAACGCCTTCGTGTACGCCGTCCTCACAACAAAAATCTACTGC
CGCCCAACCTGTCCCGCGCGTCTCGCCCGACGAGCCAACGTCCGGTTCTA
CGATACAGCTTCGCAGGCTGAGCTTGCAGGGTTTCGCCCCTGTAAGCGCT
GCAAACCCGAGATTGTCATCAACAATAGCAACAACTTGTTGGGGGCGGGT
AGCAATACCACAGCTACTGGTAGTGGTACTTTTAGTACTACTTTCCATCC
GCAAATCCCCTCAGTGCAGAGAGCTTGTCAGACTATCAGGGCTTCTGTGC
AGGCGGGTTCAAAACCGACGTTGCGGATGCTGGCGGCGGAGGCGGGGCTG
ACGCCGAGTCATTTTCATAGGGTGTTTAAAAGGGTGATGGGCGTTACGGT
GGGGAGGTATGTGGTTGATGTTATAAGGAAGAGTGGTGATGGGGAGGTGT
TGGAGGGATCGTGTAGGGATTGGGTTGGGGGTGAGGGTGAGGGTGAGGAT
GCTGGAAATTGGCCCGTGCTATGGAATGACTTCGATGTTTTACTAGCCGC
TGAGGAGGAG
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Coding sequence (CDS) from alignment at ACJE01000012.1:644517..645176+

>ASPNIDRAFT_192778-T1 ID=ASPNIDRAFT_192778-T1|Name=ASPNIDRAFT_192778-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1224bp|location=Sequence derived from alignment at ACJE01000012.1:644517..645176+ (Aspergillus niger ATCC 1015)
ATGGTACCACCCCCGAAACTCCCTCTCCCCAAACCATCCCTATCCCCCTC
CTCCACATCCCCATCCACCCGCTGGCTCGCCATCCAAACCCGCGACCCCA
AATTTACCAACGCCTTCGTGTACGCCGTCCTCACAACAAAAATCTACTGC
CGCCCAACCTGTCCCGCGCGTCTCGCCCGACGAGCCAACGTCCGGTTCTA
CGATACAGCTTCGCAGGCTGAGCTTGCAGGGTTTCGCCCCTGTAAGCGCT
GCAAACCCGAGATTGTCATCAACAATAGCAACAACTTTACTACTTTCCAT
CCGCAAATCCCCTCAGTGCAGAGAGCTTGTCAGACTATCAGGGCTTCTGT
GCAGGCGGGTTCAAAACCGACGTTGCGGATGCTGGCGGCGGAGGCGGGGC
TGACGCCGAGTCATTTTCATAGGGTGTTTAAAAGGGTGATGGGCGTTACG
GTGGGGAGGTATGTGGTTGATGTTATAAGGAAGAGTGGTGATGGGGAGGT
GTTGGAGGGATCGTGTAGGGATTGGGTTGGGGGTGAGGGTGAGGGTGAGG
ATGCTGGAAATTGGCCCGTGCTATGGAATGACTTCGATGTTTTACTAGCC
GCTGAGGAGGAGATGGTACCACCCCCGAAACTCCCTCTCCCCAAACCATC
CCTATCCCCCTCCTCCACATCCCCATCCACCCGCTGGCTCGCCATCCAAA
CCCGCGACCCCAAATTTACCAACGCCTTCGTGTACGCCGTCCTCACAACA
AAAATCTACTGCCGCCCAACCTGTCCCGCGCGTCTCGCCCGACGAGCCAA
CGTCCGGTTCTACGATACAGCTTCGCAGGCTGAGCTTGCAGGGTTTCGCC
CCTGTAAGCGCTGCAAACCCGAGATTGTCATCAACAATAGCAACAACTTT
ACTACTTTCCATCCGCAAATCCCCTCAGTGCAGAGAGCTTGTCAGACTAT
CAGGGCTTCTGTGCAGGCGGGTTCAAAACCGACGTTGCGGATGCTGGCGG
CGGAGGCGGGGCTGACGCCGAGTCATTTTCATAGGGTGTTTAAAAGGGTG
ATGGGCGTTACGGTGGGGAGGTATGTGGTTGATGTTATAAGGAAGAGTGG
TGATGGGGAGGTGTTGGAGGGATCGTGTAGGGATTGGGTTGGGGGTGAGG
GTGAGGGTGAGGATGCTGGAAATTGGCCCGTGCTATGGAATGACTTCGAT
GTTTTACTAGCCGCTGAGGAGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008168methyltransferase activity
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192778ASPNIDRAFT_192778Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192778-T1.exon1ASPNIDRAFT_192778-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192778-T1.exon2ASPNIDRAFT_192778-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192778-T1.cdsASPNIDRAFT_192778-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192778-T1ASPNIDRAFT_192778-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR004026
DBxrefInterPro:IPR018060
DBxrefInterPro:IPR035451
DBxrefPFAM:PF00165
DBxrefPFAM:PF02805
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:644517..645176 +
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