You are here

Home

ASPNIDRAFT_192903-T1, ASPNIDRAFT_192903-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_192903-T1
Unique NameASPNIDRAFT_192903-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:484629..485921-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_192903-T1 ID=ASPNIDRAFT_192903-T1|Name=ASPNIDRAFT_192903-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1293bp|location=Sequence derived from alignment at ACJE01000012.1:484629..485921- (Aspergillus niger ATCC 1015)
ATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGG
CCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACA
TCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTT
CTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTG
TATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGT
TCGTAGAGAGAGTCAAGCAATGTAAGTCCCGTCCACTTGTATCTCAACCA
TCTACATGCATCTGGGCGCTGACCCCCTCCAAGTCAAAGATGTACACAAA
GCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGG
CCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACCACA
ACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCA
TCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGA
GGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGG
AACAATCCCTAACGATTCGCTTCCGAGAACTGCCCTACTCCGTCGAAACG
GGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAA
CGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAACAATCAGCCG
GCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAA
GAACGTAAGCATCCCTCCACCCCCATACCTAAAACCAAACGTCCATCACT
AACCAAAACTACCCCACACAGTAATCGCCAGCCTCACCACCCGCCTCAAC
GCCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCGC
GAGCATCTCCACCTCCGACCCAGAAACCCCCAACTCAACAACAACCCTCT
CCCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCTT
CTCACCCCTGATGAACAAAGCGCCTTCACAGCCGAAGCCATCGCCCAGAG
CAACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATCA
GCGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAGA
CGGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGTT
CACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000012.1:484629..485921-

>ASPNIDRAFT_192903-T1 ID=ASPNIDRAFT_192903-T1|Name=ASPNIDRAFT_192903-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3492bp|location=Sequence derived from alignment at ACJE01000012.1:484629..485921- (Aspergillus niger ATCC 1015)
TAATCGCCAGCCTCACCACCCGCCTCAACGCCATCAAGACCCTCGAATCC
CGTATCTCCCTCATCAAATCCTACGTCGCGAGCATCTCCACCTCCGACCC
AGAAACCCCCAACTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACA
TCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAACAAAGC
GCCTTCACAGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCTCGTCTC
CCTATTAGGACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGCTCGGGA
AACGAACTGCGCTGATGAACAGTGTCAGACGGACGATGATGTCGCGGAAA
ACGCAACAATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTCGACTGG
GGATGGGGTGAGTCATGGATAGTCAAAGATGTACACAAAGCTCCTGCCCT
TGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCG
TCCACCTCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCC
GTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGG
CGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATG
CGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTA
ACGATTCGCTTCCGAGAACTGCCCTACTCCGTCGAAACGGGGGAAGCCGA
GATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAG
ACACACAAGGCACGGCCTCTCTCACAAAACAATCAGCCGGCAAAGAACCC
AGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACATGTCTG
ATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGGCCTCCAT
ATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACATCACCCG
CCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCC
AGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTGTATTGTG
AACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGA
GAGAGTCAAGCAATTAATCGCCAGCCTCACCACCCGCCTCAACGCCATCA
AGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCGCGAGCATC
TCCACCTCCGACCCAGAAACCCCCAACTCAACAACAACCCTCTCCCACCC
CATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCC
CTGATGAACAAAGCGCCTTCACAGCCGAAGCCATCGCCCAGAGCAACGAC
GTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAGCGCGAT
GCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAGACGGACGA
TGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGTTCACTGAA
CCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAGTCAAAGATGTACAC
AAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTC
CGGCCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACC
ACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGAT
GCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATA
CGAGGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAG
AGGAACAATCCCTAACGATTCGCTTCCGAGAACTGCCCTACTCCGTCGAA
ACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAG
AAACGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAACAATCAG
CCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAA
GAAGAACATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCG
ACTCCGGCCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCA
GACCACATCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGG
AGCGCTTCTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCT
TTGAGTGTATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAG
GACTGGTTCGTAGAGAGAGTCAAGCAATTAATCGCCAGCCTCACCACCCG
CCTCAACGCCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCT
ACGTCGCGAGCATCTCCACCTCCGACCCAGAAACCCCCAACTCAACAACA
ACCCTCTCCCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCT
CTCCCTTCTCACCCCTGATGAACAAAGCGCCTTCACAGCCGAAGCCATCG
CCCAGAGCAACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAG
AGCATCAGCGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAG
TGTCAGACGGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGA
ATCGGTTCACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
TCAAAGATGTACACAAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCA
ACTGCTCCCCCGTCCGGCCCCAACACCGTCCACCTCCCAATCCATCGCCA
GATCCTCCACAACCACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCAT
CCCTGGTACAAGATGCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATC
TACGAAAGCGTATACGAGGGCGAAAATGCGACAGAGAACAGCAAGACAAT
GCAGGTTGATGGAGAGGAACAATCCCTAACGATTCGCTTCCGAGAACTGC
CCTACTCCGTCGAAACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTA
GCAAGGACAGCCAGAAACGCCGCCGCAGACACACAAGGCACGGCCTCTCT
CACAAAACAATCAGCCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGC
TCTCCCCCGAGGAAGAAGAACATGTCTGATCAGCCGGAATCCCTCCTATC
TCCGAAGAACTCCGACTCCGGCCTCCATATCCAGCTCCACCCTCTGATCC
TCCTGACCATCTCAGACCACATCACCCGCCATGCCGCCCGCTCTCAGCAA
GGACCTATAGTGGGAGCGCTTCTAGGCCAGCAGAACGGACGCGAAATCAC
CTTGGAACACGTCTTTGAGTGTATTGTGAACGAGGGCCCCAATGGAGATC
TGCAGATTCCGCAGGACTGGTTCGTAGAGAGAGTCAAGCAAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192903ASPNIDRAFT_192903Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192903-T1ASPNIDRAFT_192903-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192903-T1.cdsASPNIDRAFT_192903-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_192903-T1.exon3ASPNIDRAFT_192903-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192903-T1.exon2ASPNIDRAFT_192903-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_192903-T1.exon1ASPNIDRAFT_192903-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteMEROPS:MER0030137
DBxrefInterPro:IPR033859
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR024969
DBxrefInterPro:IPR000555
DBxrefPFAM:PF13012
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:484629..485921 -
Powered by Drupal