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ASPNIDRAFT_193330-T1, ASPNIDRAFT_193330-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_193330-T1
Unique NameASPNIDRAFT_193330-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:1530524..1532394+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_193330-T1 ID=ASPNIDRAFT_193330-T1|Name=ASPNIDRAFT_193330-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1871bp|location=Sequence derived from alignment at ACJE01000016.1:1530524..1532394+ (Aspergillus niger ATCC 1015)
ATGGCGCCTACGGAATCTTCAATTCTGGGCAATTTTCTGCTCTCACCGGC
TCCTTTGCCGACAATCATGTCGTTACAGCAGTTTACGGAGCTCTTTCCAA
AGCGTTTGCGGTCTCACCCGCATATTAGAGCGCTCTATCGCGAACTGCAA
GAGCTCCGGGAAAATGACATGGACCTTGTTAACGGTAACATTGACAAGGA
GGTTCGCCAAGGGGAGACCCAAAAGGCAGAGCTCCGGAAGTCCGTCGCCA
AGACAGGTGTTGACGGACTCAGCTCTAGCGATCAGCGTGAGATGGATATG
GATGTCCAGTTGTTCGGACAAACATCGTCTTCCGACTATCATTCACCTTC
CAGTCTCCTGGATGCCATGGAGCAGGCCATATCAGACATTGACCGCCAGG
TTTCTGAGACTGATGAGGAAGCAACAGCGATATTGGCTATGCTCAACAAC
ACGGTCGGAGAAATGAGCGACTTGCGCTACGGCAAAATGCAGGGCCCCGC
CGGCACAAGCGGCGAAGACATGGTGAATGAAGCCATCCGAGGCTTGGGTC
ATCTGGAAAATGCGTGCTACCGTAAAAGCTGAGCTCTATATGGCAGACGC
ATTACGTTTATCGAGGTTTATTTTCTCACCCCTCCACCTGCCTACTTGTC
AGGCACGAATAACATAACCTGCCTGCCTGCTCGAGTTGCATTGGCCAGAT
GCCGCAAACCAACACTACAGCGCGGGTCTATACATTGTGTGAGACCAATG
TACTCTCAGCAGGGCCTCGGCATCCTTGCGGACTAGACTCCCTAGAGTAT
TGGCAACCATTGACCGTTCATTTGGAGCCTGACCAACCGAAACCACATGT
TTGTGGGGGTGAAGATCTGGACAGGACAACACTTAGCTTCAAAGGGCAGA
ACAAGCCAACCCAGTATGGCTTCCCTCATTGCATTATTTGAACAGGACGA
AAGTTCTATTGGTGATTATGAAAGACTGGTATTACGCTGCTGCCCATTGA
CTTGGATGAAAATCGAAGACTCTGATGCAGGACGATACCCTATTCAGATA
TCAAATTGACGATCTGTCACTTCTGCTTCCCAGCTTCAGAGGACATAACA
TCTGTAGAATGTAGCTTGAAGACTACCTTGGCGTCTTTCAGATTGACTCT
ATAAGTTTGCAACTTCGAGAGCCGCCTTCGTGACACTACATCCCAAAAAG
GAAATACCGATAAGATACGGAATTGGCGTGACGCGCTAATCTTAATCTCT
CTTTTCGCGACCTCCAATTCCAAGACCAATTGCCACGCCCTCGATTTCCT
ACTTCATACACTTTCCTTACATCAAAAGCACGAGCCCAGGTAACACTCTA
TTTAAGAGTACATTCTTGACGACAAATATTTCAAAATGCCATCAATACCC
CTCTACCCTCGCGCGTCTAATCCCTCCGCACGCGTCAACAATCCCCTCCC
TCAGCTTCTGCGAACACCCTCCGGTCTCGCGCTTCTCGAGCTCCAAGGCA
CCATCAACCTTCCACCGCAAGACAACGTTGAAAACAATGAGTCGTCAAGG
TCATCACCTGATGGCCCCAGCAATCCCAATGCTGCCCCCGTGTTCGAAAC
CCCAATCGGCAAGCTCATGTTCCCCGACTATTCTCCGCAGGTCACGGCAC
CAGACGATACGAAATGGATGAAGAGGGTCTATCTATACGTTGGACGGTAT
CAGCGAATGACAGGGGAGGTCAAAAAGCTACCACAGCCACTTGCAGTGGT
GCAGCGGAGGCAGAAGGAACCGGGTGCGACGGCTGACGACAGAGAAGAGT
TGGAGATTGTCGAGATCGTGAAGTACAAGATCTACTTTAAGAGTAGGCCG
GAGCCTGTCAATGATATCTGA
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Coding sequence (CDS) from alignment at ACJE01000016.1:1530524..1532394+

>ASPNIDRAFT_193330-T1 ID=ASPNIDRAFT_193330-T1|Name=ASPNIDRAFT_193330-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2172bp|location=Sequence derived from alignment at ACJE01000016.1:1530524..1532394+ (Aspergillus niger ATCC 1015)
ATGGCGCCTACGGAATCTTCAATTCTGGGCAATTTTCTGCTCTCACCGGC
TCCTTTGCCGACAATCATGTCGTTACAGCAGTTTACGGAGCTCTTTCCAA
AGCGTTTGCGGTCTCACCCGCATATTAGAGCGCTCTATCGCGAACTGCAA
GAGCTCCGGGAAAATGACATGGACCTTGTTAACGGTAACATTGACAAGGA
GGTTCGCCAAGGGGAGACCCAAAAGGCAGAGCTCCGGAAGTCCGTCGCCA
AGACAGGTGTTGACGGACTCAGCTCTAGCGATCAGCGTGAGATGGATATG
GATGTCCAGTTGTTCGGACAAACATCGTCTTCCGACTATCATTCACCTTC
CAGTCTCCTGGATGCCATGGAGCAGGCCATATCAGACATTGACCGCCAGG
TTTCTGAGACTGATGAGGAAGCAACAGCGATATTGGCTATGCTCAACAAC
ACGGTCGGAGAAATGAGCGACTTGCGCTACGGCAAAATGCAGGGCCCCGC
CGGCACAAGCGGCGAAGACATGGTGAATGAAGCCATCCGAGGCTTGGGTC
ATCTGGAAAATGCGTGCTACCAGTACATTCTTGACGACAAATATTTCAAA
ATGCCATCAATACCCCTCTACCCTCGCGCGTCTAATCCCTCCGCACGCGT
CAACAATCCCCTCCCTCAGCTTCTGCGAACACCCTCCGGTCTCGCGCTTC
TCGAGCTCCAAGGCACCATCAACCTTCCACCGCAAGACAACGTTGAAAAC
AATGAGTCGTCAAGGTCATCACCTGATGGCCCCAGCAATCCCAATGCTGC
CCCCGTGTTCGAAACCCCAATCGGCAAGCTCATGTTCCCCGACTATTCTC
CGCAGGTCACGGCACCAGACGATACGAAATGGATGAAGAGGGTCTATCTA
TACGTTGGACGGTATCAGCGAATGACAGGGGAGGTCAAAAAGCTACCACA
GCCACTTGCAGTGGTGCAGCGGAGGCAGAAGGAACCGGGTGCGACGGCTG
ACGACAGAGAAGAGTTGGAGATTGTCGAGATCGTGAAGTACAAGATCTAC
TTTAAGAGTAGGCCGGAGCCTGTCAATGATATCTGAATGGCGCCTACGGA
ATCTTCAATTCTGGGCAATTTTCTGCTCTCACCGGCTCCTTTGCCGACAA
TCATGTCGTTACAGCAGTTTACGGAGCTCTTTCCAAAGCGTTTGCGGTCT
CACCCGCATATTAGAGCGCTCTATCGCGAACTGCAAGAGCTCCGGGAAAA
TGACATGGACCTTGTTAACGGTAACATTGACAAGGAGGTTCGCCAAGGGG
AGACCCAAAAGGCAGAGCTCCGGAAGTCCGTCGCCAAGACAGGTGTTGAC
GGACTCAGCTCTAGCGATCAGCGTGAGATGGATATGGATGTCCAGTTGTT
CGGACAAACATCGTCTTCCGACTATCATTCACCTTCCAGTCTCCTGGATG
CCATGGAGCAGGCCATATCAGACATTGACCGCCAGGTTTCTGAGACTGAT
GAGGAAGCAACAGCGATATTGGCTATGCTCAACAACACGGTCGGAGAAAT
GAGCGACTTGCGCTACGGCAAAATGCAGGGCCCCGCCGGCACAAGCGGCG
AAGACATGGTGAATGAAGCCATCCGAGGCTTGGGTCATCTGGAAAATGCG
TGCTACCAGTACATTCTTGACGACAAATATTTCAAAATGCCATCAATACC
CCTCTACCCTCGCGCGTCTAATCCCTCCGCACGCGTCAACAATCCCCTCC
CTCAGCTTCTGCGAACACCCTCCGGTCTCGCGCTTCTCGAGCTCCAAGGC
ACCATCAACCTTCCACCGCAAGACAACGTTGAAAACAATGAGTCGTCAAG
GTCATCACCTGATGGCCCCAGCAATCCCAATGCTGCCCCCGTGTTCGAAA
CCCCAATCGGCAAGCTCATGTTCCCCGACTATTCTCCGCAGGTCACGGCA
CCAGACGATACGAAATGGATGAAGAGGGTCTATCTATACGTTGGACGGTA
TCAGCGAATGACAGGGGAGGTCAAAAAGCTACCACAGCCACTTGCAGTGG
TGCAGCGGAGGCAGAAGGAACCGGGTGCGACGGCTGACGACAGAGAAGAG
TTGGAGATTGTCGAGATCGTGAAGTACAAGATCTACTTTAAGAGTAGGCC
GGAGCCTGTCAATGATATCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000776kinetochore
GO:0031390Ctf18 RFC-like complex
Vocabulary: Biological Process
TermDefinition
GO:0007064mitotic sister chromatid cohesion
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_193330ASPNIDRAFT_193330Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_193330-T1.exon1ASPNIDRAFT_193330-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_193330-T1.exon2ASPNIDRAFT_193330-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_193330-T1.cdsASPNIDRAFT_193330-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_193330-T1ASPNIDRAFT_193330-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018565
DBxrefInterPro:IPR018607
DBxrefPFAM:PF09696
DBxrefPFAM:PF09447
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:1530524..1532394 +
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