You are here

Home

ASPNIDRAFT_195180-T1, ASPNIDRAFT_195180-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_195180-T1
Unique NameASPNIDRAFT_195180-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000018.1:136489..138014+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_195180-T1 ID=ASPNIDRAFT_195180-T1|Name=ASPNIDRAFT_195180-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1526bp|location=Sequence derived from alignment at ACJE01000018.1:136489..138014+ (Aspergillus niger ATCC 1015)
ATGCTGCCCTCATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGG
GTATGTTCTTGGAGCCGCCTGCCTTGCTTCTCTTGGGGGTTTCAGCTTTG
GGTATGACCAGGGAGTCATATCAGTCATCAATGTCATGCCACAATTCCAT
GCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGG
CATGCTACTCCTCGGGGCATTTGTCGGTTGTATCTTCATGCCTTATCTTG
CAGACAGGATCTCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATTTTT
GACATTGGGGCCGTTATCCAGACCTCGGCCCAAAGTTACGGCATGCTGGT
TGCCGGAAGAGCAATTGGTGGTATTGGGGTTGGTACACTGGCTATGGTAT
GGATGAATCTCCGGCCGAATGCAACATATTGCTTGCTAATATATCTGGCT
ACTAGGGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAACCTGCGG
GGAACCCTCTTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGCGGTCAT
AGCTTATTGGGTAACGTTCGGCATGAGATTAGTTGATAGTGAAGCTTCAT
TCCGTGTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTTGGGGTC
GGTATCCATTTCTTCCCATACTCACCACGGTGGTTGGCGCTCGTTGATCG
GCAGGAGGATTGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTTCCATTGA
GCGATCAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGAGGTTAGA
GCCCAGAAACTCATGGAACAACAACAGCGCCCGGGCGTGACTGGCATCAA
GCGAGAGGCTCTGATATGGATGGACCTATTCAGGCCGCAGACCTGGAAGA
GGACAGCAGTCGGTGTGGGTGTAGGGTTTTTCCAACAATTCTCGGGGGTC
AATGCGTTTATTTACTACGCGCCCACGCTTTTCCAATTGATCGGCCAGAA
GGGCGAGATGTCATTGATCTTGTCAGGTGTATTCAATACCCTCCAGCTTC
TCACTGTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGGCGCCCC
TTGGCGATACTAGGCGGTTTCCTGATGGGAGCCTGCTATATTATCATTGC
CGTGCTGATGGCTCTTTATGGGCCCGACTGGGCTAACCCATCGGCCGGTT
GGGGCTGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGGGAACACA
TACTCGCCTCTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAATGCACT
TCGTTCGAAAGGGGTTGCGTTATCAACTTGCGTCAACTGGCTGTCCAATT
TTATTGTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGGTTATGGC
ACATACGTCTTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTGGGCCTT
TTTTCTGGTTCCCGAGACAACCGGCAGAACACTGGAGCAGATTGACGAAG
TTTTTGGCAATATTAGCAAACAAGCA
back to top

Coding sequence (CDS) from alignment at ACJE01000018.1:136489..138014+

>ASPNIDRAFT_195180-T1 ID=ASPNIDRAFT_195180-T1|Name=ASPNIDRAFT_195180-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2932bp|location=Sequence derived from alignment at ACJE01000018.1:136489..138014+ (Aspergillus niger ATCC 1015)
ATGCTGCCCTCATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGG
GTATGTTCTTGGAGCCGCCTGCCTTGCTTCTCTTGGGGGTTTCAGCTTTG
GGTATGACCAGGGAGTCATATCAGTCATCAATGTCATGCCACAATTCCAT
GCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGG
CATGCTACTCCTCGGGGCATTTGTCGGTTGTATCTTCATGCCTTATCTTG
CAGACAGGATCTCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATTTTT
GACATTGGGGCCGTTATCCAGACCTCGGCCCAAAGTTACGGCATGCTGGT
TGCCGGAAGAGCAATTGGTGGTATTGGGGTTGGTACACTGGCTATGGGCG
CACCGCTTTATATCTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTC
TTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTG
GGTAACGTTCGGCATGAGATTAGTTGATAGTGAAGCTTCATTCCGTGTGC
CTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCAT
TTCTTCCCATACTCACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGA
TTGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTTCCATTGAGCGATCAGA
AAGTCCAAGCTGAATACAACGCAATCATCGGTGAGGTTAGAGCCCAGAAA
CTCATGGAACAACAACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGC
TCTGATATGGATGGACCTATTCAGGCCGCAGACCTGGAAGAGGACAGCAG
TCGGTGTGGGTGTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTT
ATTTACTACGCGCCCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGAT
GTCATTGATCTTGTCAGGTGTATTCAATACCCTCCAGCTTCTCACTGTCC
TGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATA
CTAGGCGGTTTCCTGATGGGAGCCTGCTATATTATCATTGCCGTGCTGAT
GGCTCTTTATGGGCCCGACTGGGCTAACCCATCGGCCGGTTGGGGCTGCG
TGGCGGTGGCCTTTCTTTACATCCTCATCTACGGGAACACATACTCGCCT
CTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAA
AGGGGTTGCGTTATCAACTTGCGTCAACTGGCTGTCCAATTTTATTGTTG
GGATCGTGACTCCGGTGATGATGGCTAATATTGGTTATGGCACATACGTC
TTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGT
TCCCGAGACAACCGGCAGAACACTGGAGCAGATTGACGAAGTTTTTGGCA
ATATTAGCAAACAAGCATGCTGCCCTCATATGGCCCGGATGGCGTCAGAG
GGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGCCTTGCTTCTCTT
GGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATCAGTCATCAATGT
CATGCCACAATTCCATGCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCA
AAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTTGTCGGTTGTATC
TTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATGGGCCCTGACGGT
GGTCGTTATCATTTTTGACATTGGGGCCGTTATCCAGACCTCGGCCCAAA
GTTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGTATTGGGGTTGGT
ACACTGGCTATGGGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAA
CCTGCGGGGAACCCTCTTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCG
CGGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTAGTTGATAGTGAA
GCTTCATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGT
TGGGGTCGGTATCCATTTCTTCCCATACTCACCACGGTGGTTGGCGCTCG
TTGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTT
CCATTGAGCGATCAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGA
GGTTAGAGCCCAGAAACTCATGGAACAACAACAGCGCCCGGGCGTGACTG
GCATCAAGCGAGAGGCTCTGATATGGATGGACCTATTCAGGCCGCAGACC
TGGAAGAGGACAGCAGTCGGTGTGGGTGTAGGGTTTTTCCAACAATTCTC
GGGGGTCAATGCGTTTATTTACTACGCGCCCACGCTTTTCCAATTGATCG
GCCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTATTCAATACCCTC
CAGCTTCTCACTGTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCG
GCGCCCCTTGGCGATACTAGGCGGTTTCCTGATGGGAGCCTGCTATATTA
TCATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGGGCTAACCCATCG
GCCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGG
GAACACATACTCGCCTCTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCA
ATGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGCGTCAACTGGCTG
TCCAATTTTATTGTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGG
TTATGGCACATACGTCTTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGT
GGGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACACTGGAGCAGATT
GACGAAGTTTTTGGCAATATTAGCAAACAAGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_195180ASPNIDRAFT_195180Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_195180-T1.exon1ASPNIDRAFT_195180-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_195180-T1.exon2ASPNIDRAFT_195180-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_195180-T1.cdsASPNIDRAFT_195180-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_195180-T1ASPNIDRAFT_195180-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000181.2
NoteEggNog:ENOG41
NoteSMCOG1169:sugar transport protein
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000018.1supercontigACJE01000018.1:136489..138014 +
Powered by Drupal