|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000012.1:136806..137825+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_195474-T1 ID=ASPNIDRAFT_195474-T1|Name=ASPNIDRAFT_195474-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1020bp|location=Sequence derived from alignment at ACJE01000012.1:136806..137825+ (Aspergillus niger ATCC 1015)
TTCGGCCCCTCCCCTATCCACGCCCTCCCGCTCATCACCTCCGCCCTCTC
CCCCCCAAACCCATCAACAACCATCTACGCCAAACGCGACGACCTATCCT
CCCCTCTCGCCTCCGGAGGCGGCAACAAGACCCGCAAACTAGAATACCTC
ATCCCGGACGCCCTCTCCAGCGGTTCGACAACCCTAATCTCCATCGGGGG
GATCCAATCAAACCATACCCGGCAGGTCGCCGCGGCCGCCACAGTGACGG
GCTTGAAATGTCGGGTGATCCAAGAAGACTGGGTTCCCTGGAACGACGCG
CACTACAGCAAGGTGGGGAACATCCAGCTATCGAGACTCATGGGGGCGGA
TGTACGGCTTGATCCATCGGGATTTGGGATCGAGCATAAGAGTACATTAA
AGAAGCTGGAAGAGGAGTGTATCGCGGCAGGCGAGAAACCGTATTATATC
CCTGCGGGCGCGTCGGATCATCCGTTGGGTGGGTTGGGGTTCGCGCGGTG
GGCGTTTGAGGTGCGGGCTCAGGAGAAGGAGTTGGGGGTGGAGTTTGGGA
CGGTGGTGGTTTGTGCGGTGACGGGGAGTACGATGGCGGGGATGGTGGCG
GGGTTTAAGTTGTTGGAGAAGTTGGATCGAGAGGCTGGAAATGGGAGGGG
GAAGACGAGGGTGGTGGGGATTGATGCGAGTGCGAAGCCGAAGGAGACGA
GGGAGCAGGTGTTGCGGATTGCGAAGGAGACGGCGGAGAGGATTGGGTTG
GGGAGGGAGGAGGTATCGGAGGAGGATGTGGAGTTGTGGGAGGAGTGGCA
TGGGGGTGTGTATGGAGTGCCGGATAAGAGGACGTGGGAGGCGATTGAGT
TTGCGGCGAAGACGGAGGCGTTTATTACGGATCCGGTGTATGAGGGGAAG
AGTTTTGCGGGGATGATGGATTTGGTCAAGAGGGGGGAGATTCAGGGGAA
TATTCTGTTTGCGCATTTGGGAGGGCAGTTGGCGTTGAATGCTTATTCGG
ATTTGGGGAAGACGCAGTAG back to topCoding sequence (CDS) from alignment at ACJE01000012.1:136806..137825+ >ASPNIDRAFT_195474-T1 ID=ASPNIDRAFT_195474-T1|Name=ASPNIDRAFT_195474-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1020bp|location=Sequence derived from alignment at ACJE01000012.1:136806..137825+ (Aspergillus niger ATCC 1015)
TTCGGCCCCTCCCCTATCCACGCCCTCCCGCTCATCACCTCCGCCCTCTC
CCCCCCAAACCCATCAACAACCATCTACGCCAAACGCGACGACCTATCCT
CCCCTCTCGCCTCCGGAGGCGGCAACAAGACCCGCAAACTAGAATACCTC
ATCCCGGACGCCCTCTCCAGCGGTTCGACAACCCTAATCTCCATCGGGGG
GATCCAATCAAACCATACCCGGCAGGTCGCCGCGGCCGCCACAGTGACGG
GCTTGAAATGTCGGGTGATCCAAGAAGACTGGGTTCCCTGGAACGACGCG
CACTACAGCAAGGTGGGGAACATCCAGCTATCGAGACTCATGGGGGCGGA
TGTACGGCTTGATCCATCGGGATTTGGGATCGAGCATAAGAGTACATTAA
AGAAGCTGGAAGAGGAGTGTATCGCGGCAGGCGAGAAACCGTATTATATC
CCTGCGGGCGCGTCGGATCATCCGTTGGGTGGGTTGGGGTTCGCGCGGTG
GGCGTTTGAGGTGCGGGCTCAGGAGAAGGAGTTGGGGGTGGAGTTTGGGA
CGGTGGTGGTTTGTGCGGTGACGGGGAGTACGATGGCGGGGATGGTGGCG
GGGTTTAAGTTGTTGGAGAAGTTGGATCGAGAGGCTGGAAATGGGAGGGG
GAAGACGAGGGTGGTGGGGATTGATGCGAGTGCGAAGCCGAAGGAGACGA
GGGAGCAGGTGTTGCGGATTGCGAAGGAGACGGCGGAGAGGATTGGGTTG
GGGAGGGAGGAGGTATCGGAGGAGGATGTGGAGTTGTGGGAGGAGTGGCA
TGGGGGTGTGTATGGAGTGCCGGATAAGAGGACGTGGGAGGCGATTGAGT
TTGCGGCGAAGACGGAGGCGTTTATTACGGATCCGGTGTATGAGGGGAAG
AGTTTTGCGGGGATGATGGATTTGGTCAAGAGGGGGGAGATTCAGGGGAA
TATTCTGTTTGCGCATTTGGGAGGGCAGTTGGCGTTGAATGCTTATTCGG
ATTTGGGGAAGACGCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009310 | amine catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008660 | 1-aminocyclopropane-1-carboxylate deaminase activity |
| GO:0030170 | pyridoxal phosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036052 |
| DBxref | InterPro:IPR027278 |
| DBxref | InterPro:IPR005965 |
| DBxref | InterPro:IPR001926 |
| DBxref | PFAM:PF00291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000012.1 | supercontig | ACJE01000012.1:136806..137825 + |
|
