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ASPNIDRAFT_196147-T1, ASPNIDRAFT_196147-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_196147-T1
Unique NameASPNIDRAFT_196147-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2670974..2672813-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_196147-T1 ID=ASPNIDRAFT_196147-T1|Name=ASPNIDRAFT_196147-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1840bp|location=Sequence derived from alignment at ACJE01000004.1:2670974..2672813- (Aspergillus niger ATCC 1015)
ATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCA
GAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAA
GACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATG
GTGGACCGGTCTGAGTTTGTAGGTTCCCCTACGAATGTACTTTTTGGATC
TCAACTAACCGGCCTGGAGGCGTGGCGCATGCTCACTAGGTCGTTCATGA
CACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCATGTACCACGCG
CGCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACTTCCACCCAAC
TCGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTATCTCGACGGAA
ACCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGCCAATGATCCT
GATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATTGCGATGCAGT
GGATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGGGGTCACTATG
GTGCTTTCCTTCAGGAGGACTGGGACCTGATTTACAGGCTGATTAACCGA
CTTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTCGTATTCAGGA
AACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTGTCTGCTGGTG
CAAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAAAGGTCACAAC
ACTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCGATAATCTTCC
CCCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAACTATGAAGATC
TGGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCATGAGTGCGGAA
GGCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTCCGGTTGGCAG
TGAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGCGGATATCGGA
TTGACGCCATGCTACGGCGGTACTTGGACATCATTTACAAGTACGTTCTT
GAACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCTCGGACGCAGT
GGAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAAGCAGAAGACG
GCCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAGAGAGCGGCCTCC
CCCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGCTTCGCCCCAT
GGTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGATCAAGACCTG
GCGATATGCCCGCATTCGAGAATGTCTTGGCTCTCGTTGAGCAGGCAATC
AAGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCTTTGAGAAGGA
TCCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCCGAGTACGGCA
GACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCCTGAAGAGGCT
GTCGAGCTGGGCGCACTTACTGTGAAGAAGAAGAACGATGGCAACGAAAA
GCCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCTGCAGAGGGTT
CTGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCCTGCCACGACG
ACTACTCCGGACAACCTGGTGAGCGGTTGATATTACGAATCAAGATTCGG
TGTTTTTCAGCGGAGTATTGGGACCAGCATCTTATACCCAAGTCGGGCAT
AGCTACTATTCATGTTAGATATAGACGCATACAGAGCACATAGTACATAG
AGCTACGTTTATGAAATCATAATTCTCAACCTCGCTTGAC
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Coding sequence (CDS) from alignment at ACJE01000004.1:2670974..2672813-

>ASPNIDRAFT_196147-T1 ID=ASPNIDRAFT_196147-T1|Name=ASPNIDRAFT_196147-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3258bp|location=Sequence derived from alignment at ACJE01000004.1:2670974..2672813- (Aspergillus niger ATCC 1015)
GCGTGGCGCATGCTCACTAGGTCGTTCATGACACCGGAAGACCAGAAAAA
GGTTCTCGCATACTCCCCCATGTACCACGCGCGCTTGTTCCGTGAGCAAG
CGAATGTCCGCGTACAGCACTTCCACCCAACTCGCGCTGCCGCCGGCAAA
GGCGAGGATGAATCGCCGTATCTCGACGGAAACCCTTCGTTCGATCGGCC
TCTATTCGTACAATTCTGCGCCAATGATCCTGATGATTTCTTGGAGGCCG
CGCGTCATGTGGCACCATATTGCGATGCAGTGGATCTCAATCTGGGATGT
CCCCAAGGTATTGCGAAGAGGGGTCACTATGGTGCTTTCCTTCAGGAGGA
CTGGGACCTGATTTACAGGCTGATTAACCGACTTCACAACGAACTCTCGA
TCCCAGTCACTGCCAAGTTTCGTATTCAGGAAACGAAAGAGAAAACGCTC
GAATATGCGAAGATGATCTTGTCTGCTGGTGCAAACATAATCACTGTGCA
TGGACGGAGAAGAGAACAGAAAGGTCACAACACTGGACTGGCTGATTGGA
GCTACATTCGCTATCTCCGCGATAATCTTCCCCCAGAGACGGTCATCTTC
GCGAACGGCAACAACCTGAACTATGAAGATCTGGACCGTTGTCTGGAAGA
GACAGGAGCCGATGGTGTCATGAGTGCGGAAGGCAACTTGTCTGATCCGT
CAATTTTCAGCAAGCCCCCTCCGGTTGGCAGTGAAGGAAGGGAATACTGG
CGAGGCAGGGACGGAAAGGGCGGATATCGGATTGACGCCATGCTACGGCG
GTACTTGGACATCATTTACAAGTACGTTCTTGAACAACCTGTTCCGGAAA
GGAAGCCTCTTTGGCTTCCCTCGGACGCAGTGGAAGAGGAATTTGAACAG
ACAACCGAAACGACCGAGGAAGCAGAAGACGGCCCACCTAAGAAGAAGCA
AAAGCGCGAGAAGTCGAAGAGAGCGGCCTCCCCCAGTCTTGGTGTAATGC
AGGGTCATCTCTTCCAGCTGCTTCGCCCCATGGTCTCCGTGCATACCAAT
GTCCGTGATGCGCTAGCGAGATCAAGACCTGGCGATATGCCCGCATTCGA
GAATGTCTTGGCTCTCGTTGAGCAGGCAATCAAGAAGGGTCTCAAGGAAT
ACGAGCAGTTCCCGGAACGCTTTGAGAAGGATCCGAACCAAGAACTGACC
GGATCCAAAGCGACTATTGCCGAGTACGGCAGACCTTGGTGGATCTGCCA
GCCACACATTCGGCCACTGCCTGAAGAGGCTGTCGAGCTGGGCGCACTTA
CTGTGAAGAAGAAGAACGATGGCAACGAAAAGCCTAAGGCGGACGAGTCT
TCTGAAAAGGCCACCCCTGCTGCAGAGGGTTCTGCCACTCCTTCGAAGTC
GGACGTGGACGCGACCACCCCTGCCACGACGACTACTCCGGACAACCTGG
TGAGCGGTTGAATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGC
GTTGCCGACCAGAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAA
GCTCCTTGGAAGACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTA
TTGCACCTATGGTGGACCGGTCTGAGTTTGCGTGGCGCATGCTCACTAGG
TCGTTCATGACACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCAT
GTACCACGCGCGCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACT
TCCACCCAACTCGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTAT
CTCGACGGAAACCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGC
CAATGATCCTGATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATT
GCGATGCAGTGGATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGG
GGTCACTATGGTGCTTTCCTTCAGGAGGACTGGGACCTGATTTACAGGCT
GATTAACCGACTTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTC
GTATTCAGGAAACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTG
TCTGCTGGTGCAAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAA
AGGTCACAACACTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCG
ATAATCTTCCCCCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAAC
TATGAAGATCTGGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCAT
GAGTGCGGAAGGCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTC
CGGTTGGCAGTGAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGC
GGATATCGGATTGACGCCATGCTACGGCGGTACTTGGACATCATTTACAA
GTACGTTCTTGAACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCT
CGGACGCAGTGGAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAA
GCAGAAGACGGCCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAGAG
AGCGGCCTCCCCCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGC
TTCGCCCCATGGTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGA
TCAAGACCTGGCGATATGCCCGCATTCGAGAATGTCTTGGCTCTCGTTGA
GCAGGCAATCAAGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCT
TTGAGAAGGATCCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCC
GAGTACGGCAGACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCC
TGAAGAGGCTGTCGAGCTGGGCGCACTTACTGTGAAGAAGAAGAACGATG
GCAACGAAAAGCCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCT
GCAGAGGGTTCTGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCC
TGCCACGACGACTACTCCGGACAACCTGGTGAGCGGTTGAATGGCGGTCC
CGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCAGAATGCGCCT
ATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAAGACAGTTCTA
CGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATGGTGGACCGGT
CTGAGTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0017150tRNA dihydrouridine synthase activity
GO:0050660flavin adenine dinucleotide binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196147ASPNIDRAFT_196147Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196147-T1ASPNIDRAFT_196147-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196147-T1.cdsASPNIDRAFT_196147-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196147-T1.utr3p1ASPNIDRAFT_196147-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196147-T1.exon2ASPNIDRAFT_196147-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196147-T1.exon1ASPNIDRAFT_196147-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09262Q6S
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR001269
DBxrefInterPro:IPR013785
DBxrefPFAM:PF01207
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2670974..2672813 -
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