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ASPNIDRAFT_196714-T1, ASPNIDRAFT_196714-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_196714-T1
Unique NameASPNIDRAFT_196714-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:968933..970205+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_196714-T1 ID=ASPNIDRAFT_196714-T1|Name=ASPNIDRAFT_196714-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1273bp|location=Sequence derived from alignment at ACJE01000004.1:968933..970205+ (Aspergillus niger ATCC 1015)
CGACGACAATCGACGACCTGCCACGCCGACAAGGTACGTTTTTTCGCGCC
CCTTTCGTCGTGATTCCTGCTGCGATACAACGAATCGCTCTGCAGCCATC
GAGAAACAAGAAAATTGAGCACCAGAGACTGATATTCCGATTTCCGTCCA
GATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCG
ACGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGGTGAGAATTCCC
CCCTATATTGCGATCACTTAACATCCCGCCGGGTGCTCGTGTAGTTTGCC
ATAGGATGCCCTTCTTGAAATGAGAAATGGTGTTACTGGGCGGCTCGAAA
CGAATTTTTTCTTTCGCCGGCGGATGGATGTGGCACAAACAGAGAGACTT
GAGAGAAGCCTCATGTGTCTTGCTATACACTCGTTGAACTTTGCTGAGAG
TGCATCAATATAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCC
CCTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGC
TATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGC
TCCTAAGGGTGCCACCTACGGTATGTACAATCTTCGTCTTTGAGGGATTG
GAACCCAATCTAATTTGTTTGCGACTACAGGCAAGCCCACCAACATGGGT
ATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCG
TGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCA
ACCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAG
CACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGT
CCACAAGGTTCGTTATGAATGCCATTGGGGATTATATGTTCTCATTGATT
ACACGTTACTGACCGGGAATGTGTTTCATAGCACCGCGAGGCCCGTGGTC
TTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTAC
AACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCA
GAGCTACTGGCGTTACCGTTAAATGTAGATGGGGTGTTTATGGGGGTTGT
TGGTTATGGGAAAAAATTGATCCTGTGGATGTCACTATTTCGATCAAAAC
TCGCATCTACGGTGCCGTTCTGGAACTGCTGGGGTGCGAGCATAATGCAA
CAGATCTTCTGGATCGGATGTTA
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Coding sequence (CDS) from alignment at ACJE01000004.1:968933..970205+

>ASPNIDRAFT_196714-T1 ID=ASPNIDRAFT_196714-T1|Name=ASPNIDRAFT_196714-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2448bp|location=Sequence derived from alignment at ACJE01000004.1:968933..970205+ (Aspergillus niger ATCC 1015)
ATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGA
CGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGCTCCGTCAACTGA
ACGCTATCCACCGTGCTTCCCGCCCCTCTCGCCCCGACAAGGCTCGTCGT
CTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAG
ACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCACCTACGGCAAGC
CCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCT
ACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAA
CTCCTACTGGATCAACCAGGACTCCACCTACAAGTACTTCGAGGTCATCC
TCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCTCGCATCAACTGG
ATCTGCAACGCTGTCCACAAGCACCGCGAGGCCCGTGGTCTTACCGCCAC
CGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACAACAACACCC
GCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAGAGCTACTGG
CGTTACCGTTAAATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAA
GAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGC
TCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCCTCTCGCCCCGAC
AAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCG
TATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCA
CCTACGGCAAGCCCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGC
GCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCT
GCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTACT
TCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCT
CGCATCAACTGGATCTGCAACGCTGTCCACAAGCACCGCGAGGCCCGTGG
TCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCT
ACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACC
CAGAGCTACTGGCGTTACCGTTAAATGGGTGCCCTCAAGTACGTGGAAGA
GATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCC
GTTGCTGGGAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCC
TCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTA
TGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTC
CTAAGGGTGCCACCTACGGCAAGCCCACCAACATGGGTATCAACCAGCTC
AAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCG
CTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCA
CCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATC
CGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTCCACAAGCACCG
CGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACA
AGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAG
CGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAAATGGGTGCCCTCAA
GTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCC
TGCTGCGTGTCCGTTGCTGGGAGCTCCGTCAACTGAACGCTATCCACCGT
GCTTCCCGCCCCTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGC
CAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTA
AGAGACCCGCTCCTAAGGGTGCCACCTACGGCAAGCCCACCAACATGGGT
ATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCG
TGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCA
ACCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAG
CACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGT
CCACAAGCACCGCGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCC
GTGGTATCAACAAGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGC
CACACCTGGAAGCGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL15ASPNIDRAFT_196714Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196714-T1ASPNIDRAFT_196714-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196714-T1.utr5p1ASPNIDRAFT_196714-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196714-T1.exon1ASPNIDRAFT_196714-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196714-T1.exon2ASPNIDRAFT_196714-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196714-T1.exon3ASPNIDRAFT_196714-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196714-T1.exon4ASPNIDRAFT_196714-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196714-T1.exon5ASPNIDRAFT_196714-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196714-T1.cdsASPNIDRAFT_196714-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196714-T1.utr3p1ASPNIDRAFT_196714-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264L0C
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR020925
DBxrefInterPro:IPR024794
DBxrefInterPro:IPR000439
DBxrefPFAM:PF00827
Product60S ribosomal protein L15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:968933..970205 +
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