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ASPNIDRAFT_196819-T1, ASPNIDRAFT_196819-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_196819-T1
Unique NameASPNIDRAFT_196819-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:664967..665528-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_196819-T1 ID=ASPNIDRAFT_196819-T1|Name=ASPNIDRAFT_196819-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=562bp|location=Sequence derived from alignment at ACJE01000004.1:664967..665528- (Aspergillus niger ATCC 1015)
GCCGCAACCATGTCCGACCCGGTACTTTTCGAAGACACCTTCACAATCAC
CACCATCAACTCCCAGAAATATGACCGTGTTTCGCGTCTGAGCTGCAACT
CCACTGATACCCTCTCGCACTTCACCCTCGATGTCAACTCCGAGCTTTAC
CCTTGCGTCGTTGGCGAGTCTGTGAACATGGCTCTGGCCTCGACGCTTTC
TCTGGATGGCAAGGATGACTCCGGATCGAAGGGCTGGAGAGAGGTTGGAA
TGGGCGAGCAGACCTTGGCCAACGACTACGATTATGTCTGCCACGGCAAG
GTTTACCGCTTCGAGGAGGGTTCGAGTCAGGGTAACATGTAAGATTTCCT
GTGTCACGTATCGCGGTCTGTTGCGGACTTCGCGATGTGACCGAGATTAT
TATCGATCAACAACTGACTAAATCGTGTCTAGGGCCGTTTTCATCTCTTT
CGGTGGACTTTTGCTTTACCTCGAAGGTCCTTACAAGAAGTTGGCCCCCT
TGAGGATCGACTACGTGTATCTGCTCCTGAAGAAATAGAAAAAAGAAACT
TTCACGACCATC
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Coding sequence (CDS) from alignment at ACJE01000004.1:664967..665528-

>ASPNIDRAFT_196819-T1 ID=ASPNIDRAFT_196819-T1|Name=ASPNIDRAFT_196819-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=870bp|location=Sequence derived from alignment at ACJE01000004.1:664967..665528- (Aspergillus niger ATCC 1015)
GGCCGTTTTCATCTCTTTCGGTGGACTTTTGCTTTACCTCGAAGGTCCTT
ACAAGAAGTTGGCCCCCTTGAGGATCGACTACGTGTATCTGCTCCTGAAG
AAATAGATGTCCGACCCGGTACTTTTCGAAGACACCTTCACAATCACCAC
CATCAACTCCCAGAAATATGACCGTGTTTCGCGTCTGAGCTGCAACTCCA
CTGATACCCTCTCGCACTTCACCCTCGATGTCAACTCCGAGCTTTACCCT
TGCGTCGTTGGCGAGTCTGTGAACATGGCTCTGGCCTCGACGCTTTCTCT
GGATGGCAAGGATGACTCCGGATCGAAGGGCTGGAGAGAGGTTGGAATGG
GCGAGCAGACCTTGGCCAACGACTACGATTATGTCTGCCACGGCAAGGTT
TACCGCTTCGAGGAGGGTTCGAGTCAGGGTAACATGGCCGTTTTCATCTC
TTTCGGTGGACTTTTGCTTTACCTCGAAGGTCCTTACAAGAAGTTGGCCC
CCTTGAGGATCGACTACGTGTATCTGCTCCTGAAGAAATAGATGTCCGAC
CCGGTACTTTTCGAAGACACCTTCACAATCACCACCATCAACTCCCAGAA
ATATGACCGTGTTTCGCGTCTGAGCTGCAACTCCACTGATACCCTCTCGC
ACTTCACCCTCGATGTCAACTCCGAGCTTTACCCTTGCGTCGTTGGCGAG
TCTGTGAACATGGCTCTGGCCTCGACGCTTTCTCTGGATGGCAAGGATGA
CTCCGGATCGAAGGGCTGGAGAGAGGTTGGAATGGGCGAGCAGACCTTGG
CCAACGACTACGATTATGTCTGCCACGGCAAGGTTTACCGCTTCGAGGAG
GGTTCGAGTCAGGGTAACAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196819ASPNIDRAFT_196819Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196819-T1ASPNIDRAFT_196819-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196819-T1.cdsASPNIDRAFT_196819-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196819-T1.utr3p1ASPNIDRAFT_196819-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196819-T1.exon2ASPNIDRAFT_196819-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_196819-T1.exon1ASPNIDRAFT_196819-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_196819-T1.utr5p1ASPNIDRAFT_196819-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092652ZZ
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005570
DBxrefPFAM:PF03870
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:664967..665528 -
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