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ASPNIDRAFT_197120-T1, ASPNIDRAFT_197120-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_197120-T1
Unique NameASPNIDRAFT_197120-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:794602..795594+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_197120-T1 ID=ASPNIDRAFT_197120-T1|Name=ASPNIDRAFT_197120-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=993bp|location=Sequence derived from alignment at ACJE01000010.1:794602..795594+ (Aspergillus niger ATCC 1015)
CTTTACGGTTACAATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGA
CCGGAGCTTTCCCGCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCT
CTCCATTTCTCTATGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTC
CACCGCCGCTGTTGCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCG
TGTCCGCTATTCACCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAG
TACCCATTGCCTAAGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGC
CACACCAGACCATGGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTT
TGAGTACGCCGACATACGACATTGAATGCGGTTAGTTTGGAACCATATAA
GGCTGTGGTGACGTTGTGATGCTTACTATTGATCGTTTAGGCCGCTCGTG
GTCTATTCAGGAACTTCGTGAGAAGTCATGGGACGATCTCCATTCCCTGT
GGTGGGTCTGCGTCAAGGAGCGCAATCGCATAGCTACGAGCGATATGGAA
AGGAAGAGATTGAAGGCTGGTTATGGAGAGTGGGAATCCTCTGAGCGGGA
TCGTGTGGTAGGTTCAGTCCTGTTGCTGGTTTATGTTTCAAGGCTCATGA
AAGCTACAAACGTCTTACTACGAAAATTATATACAACATTAATGGGCTGC
TGCTCGCCTTGGTGCTCAATGTGCTAATGAATGGCTTTCTTAGATCCGCG
TCACGCAAAACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGG
GAGGAGGCACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAG
CCAGGAGTAAGGGCATGGGCTCTATGAGGGATAACACAAAAGGAACGGGG
GTTTGAATCTGGAAGCTCCGATAGAAACTATTGGTCTGTACTTTTGTATG
TAGTAGTATGTAGTATATGTTCTTTTATTATTGGCAACGTTTG
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Coding sequence (CDS) from alignment at ACJE01000010.1:794602..795594+

>ASPNIDRAFT_197120-T1 ID=ASPNIDRAFT_197120-T1|Name=ASPNIDRAFT_197120-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1953bp|location=Sequence derived from alignment at ACJE01000010.1:794602..795594+ (Aspergillus niger ATCC 1015)
ATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCC
GCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTA
TGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTT
GCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCA
CCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCTA
AGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCAT
GGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGAC
ATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGAGA
AGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCGC
AATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTTA
TGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCAAA
ACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGCA
CAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGTA
AATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCC
CGCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCT
ATGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGT
TGCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTC
ACCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCT
AAGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCA
TGGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGA
CATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGAG
AAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCG
CAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTT
ATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCAA
AACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGC
ACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGT
AAATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTC
CCGCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTC
TATGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTG
TTGCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATT
CACCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCC
TAAGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACC
ATGGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCG
ACATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGA
GAAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGC
GCAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGT
TATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCA
AAACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGG
CACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAG
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005761mitochondrial ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MRPL4ASPNIDRAFT_197120Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197120-T1ASPNIDRAFT_197120-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197120-T1.utr5p1ASPNIDRAFT_197120-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197120-T1.exon1ASPNIDRAFT_197120-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197120-T1.exon2ASPNIDRAFT_197120-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197120-T1.exon3ASPNIDRAFT_197120-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197120-T1.cdsASPNIDRAFT_197120-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197120-T1.utr3p1ASPNIDRAFT_197120-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264BWL
DBxrefInterPro:IPR038340
DBxrefInterPro:IPR010729
DBxrefPFAM:PF06984
Product54S ribosomal protein L4 mitochondrial
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:794602..795594 +
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