You are here

Home

ASPNIDRAFT_197381-T1, ASPNIDRAFT_197381-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_197381-T1
Unique NameASPNIDRAFT_197381-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1590046..1591755-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_197381-T1 ID=ASPNIDRAFT_197381-T1|Name=ASPNIDRAFT_197381-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1710bp|location=Sequence derived from alignment at ACJE01000010.1:1590046..1591755- (Aspergillus niger ATCC 1015)
TGCGCTCTCTCTCCATCACCTTTTCCCGTCCACCGCCATTTCACTCTGGT
ACCGGTGCGTAGTATACCTCCTTCTCATTTGTCCATTTTCCCCCTCCAAT
GTTCCCTCCGTCACATTACCCCTGCTCGATTCTGGCCCTTTCCTCCCGCC
CCCCCTCCTCATCCGGACTCCCTCGTGTGTCTTGCTTACGTCTTCCTTCA
GGCTACTACTCCCGAGCAGTGCTCTCTGTATCCGCTCGGCCTGAGCCGCC
CTTCGCGAGCTGAAATCATCCTCCAGATTGATAATCATTCCTAGTGTGGG
CTTGTCCTGCAAGACGACCTGATCGCATACCATCATCGCCTTCGTTGGGC
TCTCGAGCCATGTCTGAATCAACCAGCACAAATACCCCCAAGCCGAGTAG
CAGCGTCAAGCTGGTACTTTTGGGTGAAGCCGCTGTGGGAAAGGTACGAC
CAACCTCGGCACTTTCCTTGCTTTGACCTCCGCGTGGTACCTGAGTAACC
AAAGAAGAAAGAAGACTGACAATGAACGCAATGGATGATTGCCCATTATA
GTCCTCCCTGGTGCTGAGATTTGTCAACAACGATTTCCAAGAAAACAAAG
AACCAACTATTGGAGGTAAGCTTTTCCGATTTTGGCAGTTACAGATCACT
TTCTCTGGATTGGGAAGAGAGAGAGGGAAAGGAAGAAGAAGAAGGGAAAT
TGTTCCCGGTTTTCTTGGTTTCCGAAAGTGGCCGTATCTCCGATGCTGAT
GTCATTGCCTCTATAATAGCTGCATTTCTTACCCAAAAATGTTCCCTGCC
TACGCGAACGATCAAGTTCGAAATTTGGGATACCGCCGGTCAGGAGCGCT
TCGCTTCGCTCGCTCCCATGTACTACCGTAACGCCCAGGCGGCGCTCGTG
GTCTATGATGTTACCAAACCGTCCTCTCTCACAAAGGCTAAGCACTGGGT
TGCGGAACTCCAGCGACAAGCTAGTCCCGGCATTGTGATTGCTCTTGTTG
GCAACAAGCTGGATTTGACAAACGACGGGAACGAGGCGACCGGGGAGTCG
CCCGCTGATGCCGAGGGCGAATCGTCTACGGCCGATGCAGATGAAACCGC
CGAAGAACCTCAGGAAGCACAGGATGTCACTTCCGGCGATGCTCGGAAGG
TGCCTACACGGGAAGCTAGCGCCTACGCAGAGGAAGAGGGTCTCCTGTTC
TTCGAGACTAGTGCCAAGACGGGCACGAATGTCGTGGATGTCTTTACTGC
GATTGCCAACGCGATCCCGGAGAGCAGCCTGAAGAGTGGACGAGCAGGTG
GCGCTGGCACGGGCCAGACTAGCCTGAACAGCGGTCGTCCGGCTGAAGAC
TCGCGGGTCAACCTGGGGGAGCGCGGCCCGGCAACTGCAAAGGAAGGGTG
TGCCTGCTAATCTCGGATTTTTTTTTGCAGCGTGTCATGGGCTTCTGGTC
GTGCTTCTTTCGTTTTTGCAATCCCCTTTTTACTGTTCAGATACAATGTC
AGGTTGATTACACGGTAATGTCCTGCGGCAGTGATTCCCCGACCGTCAGG
ACCAGACTGACATGCAGCTTGAGCCATTCTCATTTCCCGGCGTCTTGAGT
GTTCTGTTCTGCTATGACATTGCATTACCTGTTTATCTTTTTCTGTTTGT
TTCCGATGACTATGCAGAGTTAGTATGGCGATTAAGGGAATGGCAAAGAT
TTGTACAGAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1590046..1591755-

>ASPNIDRAFT_197381-T1 ID=ASPNIDRAFT_197381-T1|Name=ASPNIDRAFT_197381-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2367bp|location=Sequence derived from alignment at ACJE01000010.1:1590046..1591755- (Aspergillus niger ATCC 1015)
CTGCATTTCTTACCCAAAAATGTTCCCTGCCTACGCGAACGATCAAGTTC
GAAATTTGGGATACCGCCGGTCAGGAGCGCTTCGCTTCGCTCGCTCCCAT
GTACTACCGTAACGCCCAGGCGGCGCTCGTGGTCTATGATGTTACCAAAC
CGTCCTCTCTCACAAAGGCTAAGCACTGGGTTGCGGAACTCCAGCGACAA
GCTAGTCCCGGCATTGTGATTGCTCTTGTTGGCAACAAGCTGGATTTGAC
AAACGACGGGAACGAGGCGACCGGGGAGTCGCCCGCTGATGCCGAGGGCG
AATCGTCTACGGCCGATGCAGATGAAACCGCCGAAGAACCTCAGGAAGCA
CAGGATGTCACTTCCGGCGATGCTCGGAAGGTGCCTACACGGGAAGCTAG
CGCCTACGCAGAGGAAGAGGGTCTCCTGTTCTTCGAGACTAGTGCCAAGA
CGGGCACGAATGTCGTGGATGTCTTTACTGCGATTGCCAACGCGATCCCG
GAGAGCAGCCTGAAGAGTGGACGAGCAGGTGGCGCTGGCACGGGCCAGAC
TAGCCTGAACAGCGGTCGTCCGGCTGAAGACTCGCGGGTCAACCTGGGGG
AGCGCGGCCCGGCAACTGCAAAGGAAGGGTGTGCCTGCTAATCCTCCCTG
GTGCTGAGATTTGTCAACAACGATTTCCAAGAAAACAAAGAACCAACTAT
TGGAGATGTCTGAATCAACCAGCACAAATACCCCCAAGCCGAGTAGCAGC
GTCAAGCTGGTACTTTTGGGTGAAGCCGCTGTGGGAAAGCTGCATTTCTT
ACCCAAAAATGTTCCCTGCCTACGCGAACGATCAAGTTCGAAATTTGGGA
TACCGCCGGTCAGGAGCGCTTCGCTTCGCTCGCTCCCATGTACTACCGTA
ACGCCCAGGCGGCGCTCGTGGTCTATGATGTTACCAAACCGTCCTCTCTC
ACAAAGGCTAAGCACTGGGTTGCGGAACTCCAGCGACAAGCTAGTCCCGG
CATTGTGATTGCTCTTGTTGGCAACAAGCTGGATTTGACAAACGACGGGA
ACGAGGCGACCGGGGAGTCGCCCGCTGATGCCGAGGGCGAATCGTCTACG
GCCGATGCAGATGAAACCGCCGAAGAACCTCAGGAAGCACAGGATGTCAC
TTCCGGCGATGCTCGGAAGGTGCCTACACGGGAAGCTAGCGCCTACGCAG
AGGAAGAGGGTCTCCTGTTCTTCGAGACTAGTGCCAAGACGGGCACGAAT
GTCGTGGATGTCTTTACTGCGATTGCCAACGCGATCCCGGAGAGCAGCCT
GAAGAGTGGACGAGCAGGTGGCGCTGGCACGGGCCAGACTAGCCTGAACA
GCGGTCGTCCGGCTGAAGACTCGCGGGTCAACCTGGGGGAGCGCGGCCCG
GCAACTGCAAAGGAAGGGTGTGCCTGCTAATCCTCCCTGGTGCTGAGATT
TGTCAACAACGATTTCCAAGAAAACAAAGAACCAACTATTGGAGATGTCT
GAATCAACCAGCACAAATACCCCCAAGCCGAGTAGCAGCGTCAAGCTGGT
ACTTTTGGGTGAAGCCGCTGTGGGAAAGCTGCATTTCTTACCCAAAAATG
TTCCCTGCCTACGCGAACGATCAAGTTCGAAATTTGGGATACCGCCGGTC
AGGAGCGCTTCGCTTCGCTCGCTCCCATGTACTACCGTAACGCCCAGGCG
GCGCTCGTGGTCTATGATGTTACCAAACCGTCCTCTCTCACAAAGGCTAA
GCACTGGGTTGCGGAACTCCAGCGACAAGCTAGTCCCGGCATTGTGATTG
CTCTTGTTGGCAACAAGCTGGATTTGACAAACGACGGGAACGAGGCGACC
GGGGAGTCGCCCGCTGATGCCGAGGGCGAATCGTCTACGGCCGATGCAGA
TGAAACCGCCGAAGAACCTCAGGAAGCACAGGATGTCACTTCCGGCGATG
CTCGGAAGGTGCCTACACGGGAAGCTAGCGCCTACGCAGAGGAAGAGGGT
CTCCTGTTCTTCGAGACTAGTGCCAAGACGGGCACGAATGTCGTGGATGT
CTTTACTGCGATTGCCAACGCGATCCCGGAGAGCAGCCTGAAGAGTGGAC
GAGCAGGTGGCGCTGGCACGGGCCAGACTAGCCTGAACAGCGGTCGTCCG
GCTGAAGACTCGCGGGTCAACCTGGGGGAGCGCGGCCCGGCAACTGCAAA
GGAAGGGTGTGCCTGCTAATCCTCCCTGGTGCTGAGATTTGTCAACAACG
ATTTCCAAGAAAACAAAGAACCAACTATTGGAGATGTCTGAATCAACCAG
CACAAATACCCCCAAGCCGAGTAGCAGCGTCAAGCTGGTACTTTTGGGTG
AAGCCGCTGTGGGAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197381ASPNIDRAFT_197381Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197381-T1ASPNIDRAFT_197381-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197381-T1.cdsASPNIDRAFT_197381-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197381-T1.utr3p1ASPNIDRAFT_197381-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197381-T1.exon4ASPNIDRAFT_197381-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197381-T1.exon3ASPNIDRAFT_197381-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197381-T1.exon2ASPNIDRAFT_197381-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197381-T1.exon1ASPNIDRAFT_197381-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197381-T1.utr5p2ASPNIDRAFT_197381-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_197381-T1.utr5p1ASPNIDRAFT_197381-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1590046..1591755 -
Powered by Drupal