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ASPNIDRAFT_197860-T1, ASPNIDRAFT_197860-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_197860-T1
Unique NameASPNIDRAFT_197860-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3107150..3108609-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_197860-T1 ID=ASPNIDRAFT_197860-T1|Name=ASPNIDRAFT_197860-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1460bp|location=Sequence derived from alignment at ACJE01000010.1:3107150..3108609- (Aspergillus niger ATCC 1015)
CCCCCCTAAAACTCCCCCCCATTCCTGGTCCCGGTTCTGCAGAACTGCTT
CCTTAGTTTACAACTACCCCTCCATCCCTTACTCAAATTCAAGCACCACT
CGCAAATCAGGTAGGTCGGACTTTTTCTTCTCTTCGTCTTTCCCTTGGCA
GTATGTTTTTGTTTCATGCTTGGTGGAGTCACTTGCAACGGTCTCTCTGA
ATCTCCGTCGTGGAGAGGACCCTCCAGGGTCTGCTGTCGACTCTCTTAAA
ACCATTCCCTTCATCCTCTCTCTCCCACTCTCTTTTTCATTTTTCCCCCC
TCCATCTGAATTTTTTTAAGTCTCTTCTTTTTTTCGGATTTTGTGACTCT
TTTTTTCTCAAAGTTCGAACGTGACTACTTTGCCAAAGAAACCATCGCAT
CTAACCCCTCATTCTCGTTGTCGTGACCTCCTCAATCCGCAAGTGCTTAC
TACCAGGATAGTTTCCAACCCCCTTGTAGGAAACCTCAATAAAAATGGCT
AAGCTCTTCATCGGGTCTGTCAATTCTGTTTCCTTTTTGGCTACCCCGCC
CCCAATATCAGACTGACCAAAATCAGCGGCCTTGCCTGGCACACCACTGA
CGAGACCCTCCGCGAGGGATTCTCGCAATACGGAACAATCGAAGAAGCCG
TTGGTCATCCATGTTTCGCGGAGCAATGAAAGTTCTCCCTTATCATGCTC
GTACTGACCGAACTCAGATCGTCGTCAAGGACCATGACACCCACCGCAGC
CGTGGATTCGGGTTTGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGC
CATGAATGCCATGAACAACCAGGAGTAAGCAAGCTATCTAAATGCTCCTC
TTTCCAGACACTCACCACTTCAGATTCGACGGCCGTGTCATCCGTGTCGA
CAAAGCCTCGGAGTCGAGACCGCGCATGGGTGGAGGTGGATTCCATGGAC
GCGGTGGCTACAACCGTGGCTACAACGGCGGCGGTGAGTTCTTCTTGGTC
ACTGCCATCAAGGCCCTCTTAAATTATATATTGTATCATATAACTAACAA
GAAGCAGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAGC
TGCGCAAGCTATTATAGCATTGCCGATGACTTACTGTGGACCGGTCTCTT
GTCCTATTTTTCATTTCTTTTCACGCTTTTTTCCCTCTTTCTCGCATGTC
AGCTGCTGTTAGTCCCTTCGGACTTAAAGTTTGGGATAAGAGCACGGGCG
CATGCTACCCAGCTTTTATGATGGTGACTTACGACGAAACGACCCCTGCC
TCTAGTGTTTTTTCCTCTATGATGTTTCCCCCCCTCTCACGCCAGTTCAT
TGCGATAATGACATCTCTCGTGGTTTGATTTGATTTCGCATCGCGTGGCT
TTAAATCAATTGTTTAATATGTCGTTTACTCGGGTCATGGTTGACATGTA
TGTAATCTGG
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Coding sequence (CDS) from alignment at ACJE01000010.1:3107150..3108609-

>ASPNIDRAFT_197860-T1 ID=ASPNIDRAFT_197860-T1|Name=ASPNIDRAFT_197860-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1755bp|location=Sequence derived from alignment at ACJE01000010.1:3107150..3108609- (Aspergillus niger ATCC 1015)
GCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGACGG
CCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGGGTG
GAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGCGGC
GATCGTCGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTTTG
TCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAAC
AACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGAGGG
ATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCATCG
GGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGACG
GCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGGGT
GGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGCGG
CGATCGTCGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTTT
GTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAA
CAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGAGG
GATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCATC
GGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGAC
GGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGGG
TGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGCG
GCGATCGTCGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTT
TGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGA
ACAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGAG
GGATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCAT
CGGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCGA
CGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGG
GTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGGC
GGCGATCGTCGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGT
TTGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATG
AACAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCGA
GGGATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTCA
TCGGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTAAATTCG
ACGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGCGCATG
GGTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTACAACGG
CGGCGATCGTCGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGG
TTTGTCCGCTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCAT
GAACAACCAGGACGGCCTTGCCTGGCACACCACTGACGAGACCCTCCGCG
AGGGATTCTCGCAATACGGAACAATCGAAGAAGCCATGGCTAAGCTCTTC
ATCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197860ASPNIDRAFT_197860Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197860-T1ASPNIDRAFT_197860-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197860-T1.cdsASPNIDRAFT_197860-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197860-T1.utr3p1ASPNIDRAFT_197860-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197860-T1.exon6ASPNIDRAFT_197860-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197860-T1.exon5ASPNIDRAFT_197860-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197860-T1.exon4ASPNIDRAFT_197860-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197860-T1.exon3ASPNIDRAFT_197860-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197860-T1.exon2ASPNIDRAFT_197860-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_197860-T1.exon1ASPNIDRAFT_197860-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_197860-T1.utr5p2ASPNIDRAFT_197860-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_197860-T1.utr5p1ASPNIDRAFT_197860-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3107150..3108609 -
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