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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:3603593..3604398+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_197991-T1 ID=ASPNIDRAFT_197991-T1|Name=ASPNIDRAFT_197991-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=806bp|location=Sequence derived from alignment at ACJE01000010.1:3603593..3604398+ (Aspergillus niger ATCC 1015)
CTCCCCAGCATTTAGATCTGCAACACGGCAGTGATCCTTTGCGTGAGCCT
CTTTAGACCGCTACACACGTTAAACCCACATTTTTAAACATGTCTGAGAC
TTCTGCCGGTATGCACATCCCAGGTCTCGTTTTTCTCATGGCCATATACT
GACAATTTCTATAGCCTGGCCCCTCGCCGATGAGGCCCTCACCCAGAACC
TCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGAAGGGT
GCTAACGAGGGTATGTGCTTCCTCAAGAACACTCATTGTCTGTCTGTCTG
CTAACTGTCTTTGCAGCCACCAAGACTCTTAACCGTGGTACCTCCGAGCT
CGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCACATCC
CCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAG
CTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAG
TATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCA
AGGACAAGGTCGAGAGACTGATGATCTAAGCGTTGGTCTTGTTGTGGAAA
CCCTCCGGAGGATTATGCCTCCGCGGGTTGCTAAGAGGAATCTATTGTGA
CTTCGGGAGTTGGTCGGCCATGACAGACGAGGTTTTCGCCCCACAGTGCG
AAAACAAGTGTCGATGAATGGTTTGGATCGCTACCGGATGTTCAATTGGA
TACTGTGGGCGTTGTGCGCCTGGAATGAGTGCAGATAAAAGTCAATGACA
AAAAAA back to topCoding sequence (CDS) from alignment at ACJE01000010.1:3603593..3604398+ >ASPNIDRAFT_197991-T1 ID=ASPNIDRAFT_197991-T1|Name=ASPNIDRAFT_197991-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1134bp|location=Sequence derived from alignment at ACJE01000010.1:3603593..3604398+ (Aspergillus niger ATCC 1015)
ATGTCTGAGACTTCTGCCGCCTGGCCCCTCGCCGATGAGGCCCTCACCCA
GAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGA
AGGGTGCTAACGAGGCCACCAAGACTCTTAACCGTGGTACCTCCGAGCTC
GTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCACATCCC
CCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGC
TTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGT
ATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCAA
GGACAAGGTCGAGAGACTGATGATCTAAATGTCTGAGACTTCTGCCGCCT
GGCCCCTCGCCGATGAGGCCCTCACCCAGAACCTCCTGGACCTTGTCCAG
CAGGCCGGTCACTACCGCCAGCTGAAGAAGGGTGCTAACGAGGCCACCAA
GACTCTTAACCGTGGTACCTCCGAGCTCGTTATCCTCGCTGCCGACACCT
CTCCCCTCGCTATCCTCCTCCACATCCCCCTCCTTGCTGAGGACAAGAAC
ACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGG
TGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACCAACGAGGCCAGTG
ACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGTCGAGAGACTGATG
ATCTAAATGTCTGAGACTTCTGCCGCCTGGCCCCTCGCCGATGAGGCCCT
CACCCAGAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGC
TGAAGAAGGGTGCTAACGAGGCCACCAAGACTCTTAACCGTGGTACCTCC
GAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCTCCTCCA
CATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCGTGCCCA
GCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCG
GCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGATCAAGAC
CATCAAGGACAAGGTCGAGAGACTGATGATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004038 |
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR002415 |
| DBxref | InterPro:IPR018492 |
| DBxref | PFAM:PF01248 |
| Product | RNA binding protein snu13 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:3603593..3604398 + |
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