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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:3050346..3052123+ Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_198063-T1 ID=ASPNIDRAFT_198063-T1|Name=ASPNIDRAFT_198063-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1778bp|location=Sequence derived from alignment at ACJE01000021.1:3050346..3052123+ (Aspergillus niger ATCC 1015)
CATGAAGCTTCAAACGGCTTCCGTACTGCTCGGCAGTGCTGCTGCTGCCT
CGCCTTCCATGCAGACGCGGGCCTCCGTTGTCATCGACTACAATGTCGCA
CCTCCAAACCTATCCACTCTGCCCAATGGCTCCCTCTTCGAAACATGGCG
TCCCCGCGCCCACGTCCTGCCCCCCAACGGCCAGATCGGTGACCCCTGCC
TGCATTACACCGATCCCTCCACGGGCCTCTTCCACGTCGGCTTCCTTCAC
GATGGCAGCGGCATCTCCAGCGCCACCACTGATGATCTAGCCACCTACAA
GGACCTCAACCAAGGCAACCAAGTCATTGTTCCCGGGGGTATCAACGACC
CCGTCGCCGTCTTCGATGGCTCCGTCATCCCCAGCGGCATCAACGGCCTC
CCCACTCTCCTCTACACCTCCGTCTCCTACCTTCCCATCCACTGGTCCAT
CCCCTACACCCGCGGCAGTGAGACCCAATCCCTCGCGGTCTCCTCGGACG
GTGGCAGCAACTTCACCAAGCTCGACCAGGGCCCCGTCATCCCTGGCCCT
CCCTTCGCCTACAACGTCACCGCATTCCGGGACCCATACGTCTTCCAAAA
CCCCACCCTCGACTCCCTCCTACACAGCAAGAACAACACCTGGTATACCG
TCATCTCCGGTGGTCTGCACGGCAAGGGCCCCGCCCAGTTCCTCTACCGC
CAGTACGACCCGGACTTCCAGTACTGGGAGTTCCTCGGCCAATGGTGGCA
CGAACCCACCAACTCCACCTGGGGTAACGGCACCTGGGCCGGCCGATGGG
CCTTCAACTTCGAGACCGGCAACGTCTTCAGTCTCGACGAGTACGGATAC
AACCCCCACGGCCAGATCTTCTCCACGATCGGCACCGAGGGCTCTGACCA
GCCCGTCGTGCCCCAGCTCACCAGCATCCACGACATGCTCTGGGTGTCCG
GCAACGTCTCTCGCAATGGCTCTGTCTCGTTCACCCCGAACATGGCGGGC
TTCCTCGACTGGGGCTTCTCCTCTTACGCAGCTGCCGGAAAGGTCCTCCC
CTCGACTTCTCTGCCCTCGACGAAGAGCGGCGCCCCGGACCGCTTCATCT
CGTACGTCTGGCTGTCCGGTGACCTGTTCGAACAGGCCGAAGGGTTCCCC
ACGAACCAGCAGAATTGGACCGGTACGCTGTTGCTTCCGCGAGAGTTGCG
CGTGCTGTATATCCCCAACGTGGTGGACAATGCTCTGGCTCGGGAATCTG
GTGCCTCGTGGCAGGTCGTGAGCAGCGATAGCAGTGCGGGCACCGTCGAG
CTGCAGACCCTGGGTATCTCCATTGCCCGGGAAACCAAGGCCGCCCTGCT
GTCGGGAACGTCGTTCACCGAGTCCGACCGTACTCTGAACAGCAGTGGTG
TCGTGCCGTTCAAGCGCTCCCCGTCCGAGAAGTTCTTTGTTTTGTCCGCG
CAGCTGTCCTTCCCTGCTTCGGCTAGGGGATCGGGACTCAAGAGTGGATT
CCAGATTCTCTCGTCGGAGCTGGAGAGTACTACCGTGTACTACCAGTTCT
CGAATGAGTCGATTATCGTCGACCGCAGTAACACCAGTGCTGCGGCGCGC
ACGACGGATGGTATCGATAGCAGCGCGGAGGCTGGCAAGTTGCGCCTGTT
TGACGTGTTGAATGGCGGAGAGCAGGCGATTGAGACGTTGGATTTGACTC
TCGTGGTGGATAACTCGGTCTTGGAGATCTATGCCAATGGTCGCTTTGCG
TTGAGTACTTGGGTTCGGTGAGTATCTT back to topCoding sequence (CDS) from alignment at ACJE01000021.1:3050346..3052123+ >ASPNIDRAFT_198063-T1 ID=ASPNIDRAFT_198063-T1|Name=ASPNIDRAFT_198063-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1771bp|location=Sequence derived from alignment at ACJE01000021.1:3050346..3052123+ (Aspergillus niger ATCC 1015)
CATGAAGCTTCAAACGGCTTCCGTACTGCTCGGCAGTGCTGCTGCTGCCT
CGCCTTCCATGCAGACGCGGGCCTCCGTTGTCATCGACTACAATGTCGCA
CCTCCAAACCTATCCACTCTGCCCAATGGCTCCCTCTTCGAAACATGGCG
TCCCCGCGCCCACGTCCTGCCCCCCAACGGCCAGATCGGTGACCCCTGCC
TGCATTACACCGATCCCTCCACGGGCCTCTTCCACGTCGGCTTCCTTCAC
GATGGCAGCGGCATCTCCAGCGCCACCACTGATGATCTAGCCACCTACAA
GGACCTCAACCAAGGCAACCAAGTCATTGTTCCCGGGGGTATCAACGACC
CCGTCGCCGTCTTCGATGGCTCCGTCATCCCCAGCGGCATCAACGGCCTC
CCCACTCTCCTCTACACCTCCGTCTCCTACCTTCCCATCCACTGGTCCAT
CCCCTACACCCGCGGCAGTGAGACCCAATCCCTCGCGGTCTCCTCGGACG
GTGGCAGCAACTTCACCAAGCTCGACCAGGGCCCCGTCATCCCTGGCCCT
CCCTTCGCCTACAACGTCACCGCATTCCGGGACCCATACGTCTTCCAAAA
CCCCACCCTCGACTCCCTCCTACACAGCAAGAACAACACCTGGTATACCG
TCATCTCCGGTGGTCTGCACGGCAAGGGCCCCGCCCAGTTCCTCTACCGC
CAGTACGACCCGGACTTCCAGTACTGGGAGTTCCTCGGCCAATGGTGGCA
CGAACCCACCAACTCCACCTGGGGTAACGGCACCTGGGCCGGCCGATGGG
CCTTCAACTTCGAGACCGGCAACGTCTTCAGTCTCGACGAGTACGGATAC
AACCCCCACGGCCAGATCTTCTCCACGATCGGCACCGAGGGCTCTGACCA
GCCCGTCGTGCCCCAGCTCACCAGCATCCACGACATGCTCTGGGTGTCCG
GCAACGTCTCTCGCAATGGCTCTGTCTCGTTCACCCCGAACATGGCGGGC
TTCCTCGACTGGGGCTTCTCCTCTTACGCAGCTGCCGGAAAGGTCCTCCC
CTCGACTTCTCTGCCCTCGACGAAGAGCGGCGCCCCGGACCGCTTCATCT
CGTACGTCTGGCTGTCCGGTGACCTGTTCGAACAGGCCGAAGGGTTCCCC
ACGAACCAGCAGAATTGGACCGGTACGCTGTTGCTTCCGCGAGAGTTGCG
CGTGCTGTATATCCCCAACGTGGTGGACAATGCTCTGGCTCGGGAATCTG
GTGCCTCGTGGCAGGTCGTGAGCAGCGATAGCAGTGCGGGCACCGTCGAG
CTGCAGACCCTGGGTATCTCCATTGCCCGGGAAACCAAGGCCGCCCTGCT
GTCGGGAACGTCGTTCACCGAGTCCGACCGTACTCTGAACAGCAGTGGTG
TCGTGCCGTTCAAGCGCTCCCCGTCCGAGAAGTTCTTTGTTTTGTCCGCG
CAGCTGTCCTTCCCTGCTTCGGCTAGGGGATCGGGACTCAAGAGTGGATT
CCAGATTCTCTCGTCGGAGCTGGAGAGTACTACCGTGTACTACCAGTTCT
CGAATGAGTCGATTATCGTCGACCGCAGTAACACCAGTGCTGCGGCGCGC
ACGACGGATGGTATCGATAGCAGCGCGGAGGCTGGCAAGTTGCGCCTGTT
TGACGTGTTGAATGGCGGAGAGCAGGCGATTGAGACGTTGGATTTGACTC
TCGTGGTGGATAACTCGGTCTTGGAGATCTATGCCAATGGTCGCTTTGCG
TTGAGTACTTGGGTTCGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH32 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR023296 |
| DBxref | InterPro:IPR013189 |
| DBxref | InterPro:IPR013148 |
| DBxref | InterPro:IPR001362 |
| DBxref | PFAM:PF00251 |
| DBxref | PFAM:PF08244 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:3050346..3052123 + |
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