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ASPNIDRAFT_198674-T1, ASPNIDRAFT_198674-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_198674-T1
Unique NameASPNIDRAFT_198674-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:939870..940952+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_198674-T1 ID=ASPNIDRAFT_198674-T1|Name=ASPNIDRAFT_198674-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1083bp|location=Sequence derived from alignment at ACJE01000021.1:939870..940952+ (Aspergillus niger ATCC 1015)
CAGAGCCACACCATAAGGATTTCAAGTTCTTTTGGAAGACTGTCAGCACC
ATGTCTAAGATCACAGTCGGTACGTTGCCTCTTTTCCCCAACAATGGAAA
CAATAGGTGTATGTGTATGAAAGAGAGATGCTAATTAATGAACAGCCGGA
GTGCGCCAGAACATCGAGCAGCTGCTCAACTACTCTCAGAATGAGAAGAA
GAGAAACTTCCTCGAGACCGTCGAGCTTCAGATCGGTCTGAAGAACTACG
ACCCCCAGCGTGACAAGCGTTTCTCTGGCACCATCAAGCTGCCTACCGTT
CCCCGTCCCAACATGACCATCTGGTATGATACCACCCCCACCGGAATCCT
CCCACGGAATAAAGAGAGACAAGGGAACAGAAGTACTAATAAGAGGATAG
TGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTG
ACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTC
ATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCT
CATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGGTAAGC
ACCACATTCCCCATAATATCCCCCAGTCGTGATGAAATACTAAATACTCG
ATTAGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCA
ACAAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTT
CTCTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCT
CGTCGCCAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGA
AGGGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCC
CCTAAGCGTCTGTACTAAGCGGGTCGCTTTCTTTTTTTAATCCTAAAAAG
AAAAAGTTATGTGTCACGCTGGGGGTACGACCTTTTTTTTTAGGGGCTGG
GATTCTGGGGTTGTGTTTCGTATCATAGTTTAGCTACTTATGGTGTGGAT
TATAATGTGATCCTGGGTTTTGGTCTCTATTCA
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Coding sequence (CDS) from alignment at ACJE01000021.1:939870..940952+

>ASPNIDRAFT_198674-T1 ID=ASPNIDRAFT_198674-T1|Name=ASPNIDRAFT_198674-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2616bp|location=Sequence derived from alignment at ACJE01000021.1:939870..940952+ (Aspergillus niger ATCC 1015)
ATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAGCAGCTGCT
CAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGACCGTCGAGC
TTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGCGTTTCTCT
GGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACCATCTGTGT
TCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTGACG
CCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTCATC
AAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCTCAT
CAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGCCGGTAAAT
TCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGGTCAACGAG
GTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGCCTCGGTGT
TGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGCCAACACCA
TGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTTGGCAGAAC
GTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCCTAAGCGTCTGTA
CTAAATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAGCAGC
TGCTCAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGACCGTC
GAGCTTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGCGTTT
CTCTGGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACCATCT
GTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATT
GACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCT
CATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCC
TCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGCCGGT
AAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGGTCAA
CGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGCCTCG
GTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGCCAAC
ACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTTGGCA
GAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCCTAAGCGTC
TGTACTAAATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACATCGAG
CAGCTGCTCAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCGAGAC
CGTCGAGCTTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGACAAGC
GTTTCTCTGGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACATGACC
ATCTGTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGG
CATTGACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGA
AGCTCATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGAC
ACCCTCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGC
CGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGG
TCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGC
CTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGC
CAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTT
GGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCCTAAG
CGTCTGTACTAAATGTCTAAGATCACAGTCGCCGGAGTGCGCCAGAACAT
CGAGCAGCTGCTCAACTACTCTCAGAATGAGAAGAAGAGAAACTTCCTCG
AGACCGTCGAGCTTCAGATCGGTCTGAAGAACTACGACCCCCAGCGTGAC
AAGCGTTTCTCTGGCACCATCAAGCTGCCTACCGTTCCCCGTCCCAACAT
GACCATCTGTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACC
ACGGCATTGACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAAC
AAGAAGCTCATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTC
CGACACCCTCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCA
AGGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAAC
AAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCT
CTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCG
TCGCCAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAG
GGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCC
TAAGCGTCTGTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP74ASPNIDRAFT_198674Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198674-T1ASPNIDRAFT_198674-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198674-T1.utr5p1ASPNIDRAFT_198674-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198674-T1.exon1ASPNIDRAFT_198674-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198674-T1.exon2ASPNIDRAFT_198674-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198674-T1.exon3ASPNIDRAFT_198674-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198674-T1.exon4ASPNIDRAFT_198674-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198674-T1.cdsASPNIDRAFT_198674-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198674-T1.utr3p1ASPNIDRAFT_198674-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264LBC
DBxrefInterPro:IPR023674
DBxrefInterPro:IPR023673
DBxrefInterPro:IPR028364
DBxrefInterPro:IPR002143
DBxrefInterPro:IPR016095
DBxrefPFAM:PF00687
Product60S ribosomal protein L10a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:939870..940952 +
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