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ASPNIDRAFT_198715-T1, ASPNIDRAFT_198715-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_198715-T1
Unique NameASPNIDRAFT_198715-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:811717..813058+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_198715-T1 ID=ASPNIDRAFT_198715-T1|Name=ASPNIDRAFT_198715-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1342bp|location=Sequence derived from alignment at ACJE01000021.1:811717..813058+ (Aspergillus niger ATCC 1015)
TCCTTTTCTTCTTCTTTTCTTCTACTCACCACACACATCCCCCAAACACA
CATTCACAATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCGT
ATGTTCACATTTTCCCTCTCTTTTTTATCATTTCCCTTTCCAATCTGCTC
TCAGCAGTAACTAATGGTACCCCTCAGTTGCCAACAACTACCTGGCTACC
AGGAGCTACATTGTTGGGTAAGGCACACCTTTAGGGATCCTTCCCCCCCT
CCCCCCTTAGCATTGGTGCCTTGTGAAAGATTCTTCCTTGTTTGCATGAT
GAAAAGAAATTGGTCCGTGTTTATGAGGCGGCTTAAGACCCCGCTGCAAG
ATTAAACACAATTGCGAGCAATCGCGTTTCTGATTACTTGGAAAAATTCT
TCTTTGCTTTTTGTTTTCCGTCGTTCATGGATATAATCACTAGCGATGAT
GGTGGCATGAAGCTAACTGGAATATAGCGATGCTCCTTCCCAGGCCGATG
TCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCC
CACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGC
CACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGT
CCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGACATG
GACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGA
GCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCA
AGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGGTATG
TTCCATCTTCCATTTTTGGATCTTGTGTATGATTCTAACTCGCTACAGAT
GATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGAT
CGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTA
TCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTT
GATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCAC
CGATGTTGTAAGTAAAGATGAACACCTAGGGCGTCGTGATGATGCTAATG
AAACCCCAACAGGCTGCCATGCAGAAGCTGTAAGCGGAACGTTTAATGAT
GAAGATAAATGGCGTGATGATGGATTATTTGATGCTATCCCACGGAAATA
TACTGTCATGAACTTGAATAACCCAAGCCGATTGGGGACACCCCTCGGCA
TAACGAATACCAAAAACCAAAATAAATACCCAATTAATACAC
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Coding sequence (CDS) from alignment at ACJE01000021.1:811717..813058+

>ASPNIDRAFT_198715-T1 ID=ASPNIDRAFT_198715-T1|Name=ASPNIDRAFT_198715-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3390bp|location=Sequence derived from alignment at ACJE01000021.1:811717..813058+ (Aspergillus niger ATCC 1015)
ATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCTTGCCAACAA
CTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTCCTTCCCAGGCCG
ATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTAC
CCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGCTGAGCA
CGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACGGCCCCG
AGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGACGACGAC
ATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAA
GGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGC
CCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGAT
GATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCATTGAGAT
CGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTA
TCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTT
GATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCAGTCCAC
CGATGTTGCTGCCATGCAGAAGCTGTAAATGGGTTTCACTGATCTCGCTT
CCGAAGCCGGCCTCACCCTTGCCAACAACTACCTGGCTACCAGGAGCTAC
ATTGTTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTT
CTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCTCGCTGGTACA
AGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCCCGGCGATGCC
TCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAGCTGCCCACCAA
CCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCTCCGACG
AGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCT
GAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCT
CGTGACTCTTGAGGTTAAGCCTTGGGATGATGAGACCGACATTGAGACTA
TGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGGGGTGCC
TCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGATCAACCT
TGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCG
AGGAGGACGAGGACCACGTCCAGTCCACCGATGTTGCTGCCATGCAGAAG
CTGTAAATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCACCCTTGC
CAACAACTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTCCTTCCC
AGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGACGCCGAG
AAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTTCGAGGC
TGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTGCCTACG
GCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAACGACGAC
GACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCCCGAGGT
CGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGAAGGAGG
CCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTTAAGCCT
TGGGATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCGTGCCAT
TGAGATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCGTCGGTT
ACGGTATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAGAAGGTC
TCCCTTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCACGTCCA
GTCCACCGATGTTGCTGCCATGCAGAAGCTGTAAATGGGTTTCACTGATC
TCGCTTCCGAAGCCGGCCTCACCCTTGCCAACAACTACCTGGCTACCAGG
AGCTACATTGTTGGCGATGCTCCTTCCCAGGCCGATGTCGTGACCTTCAA
GGCCTTCTCCGGTGCCCCTGACGCCGAGAAGTACCCCCACGCTGCTCGCT
GGTACAAGAACATCGCCTCTTTCGAGGCTGAGCACGCCACTCTCCCCGGC
GATGCCTCCAAGCCCTACACTGCCTACGGCCCCGAGTCCACTGAGCTGCC
CACCAACCCCAAGGCTGCCAACGACGACGACGACATGGACCTCTTCGGCT
CCGACGAGGAGGAGGAGGACCCCGAGGTCGTCAAGGAGCGTGAGGCTCGT
CTTGCTGAGTACAGGAAGAAGAAGGAGGCCAAGCCCAAGCCCGTTGCCAA
GTCTCTCGTGACTCTTGAGGTTAAGCCTTGGGATGATGAGACCGACATTG
AGACTATGGAGGCCAACGTCCGTGCCATTGAGATCGACGGTCTTGTCTGG
GGTGCCTCCAAGTTTGTTGCCGTCGGTTACGGTATCAAGAAGCTCCAGAT
CAACCTTGTCGTTGAGGACGAGAAGGTCTCCCTTGATGAGCTCCAGGCTC
AGATCGAGGAGGACGAGGACCACGTCCAGTCCACCGATGTTGCTGCCATG
CAGAAGCTGTAAATGGGTTTCACTGATCTCGCTTCCGAAGCCGGCCTCAC
CCTTGCCAACAACTACCTGGCTACCAGGAGCTACATTGTTGGCGATGCTC
CTTCCCAGGCCGATGTCGTGACCTTCAAGGCCTTCTCCGGTGCCCCTGAC
GCCGAGAAGTACCCCCACGCTGCTCGCTGGTACAAGAACATCGCCTCTTT
CGAGGCTGAGCACGCCACTCTCCCCGGCGATGCCTCCAAGCCCTACACTG
CCTACGGCCCCGAGTCCACTGAGCTGCCCACCAACCCCAAGGCTGCCAAC
GACGACGACGACATGGACCTCTTCGGCTCCGACGAGGAGGAGGAGGACCC
CGAGGTCGTCAAGGAGCGTGAGGCTCGTCTTGCTGAGTACAGGAAGAAGA
AGGAGGCCAAGCCCAAGCCCGTTGCCAAGTCTCTCGTGACTCTTGAGGTT
AAGCCTTGGGATGATGAGACCGACATTGAGACTATGGAGGCCAACGTCCG
TGCCATTGAGATCGACGGTCTTGTCTGGGGTGCCTCCAAGTTTGTTGCCG
TCGGTTACGGTATCAAGAAGCTCCAGATCAACCTTGTCGTTGAGGACGAG
AAGGTCTCCCTTGATGAGCTCCAGGCTCAGATCGAGGAGGACGAGGACCA
CGTCCAGTCCACCGATGTTGCTGCCATGCAGAAGCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005853eukaryotic translation elongation factor 1 complex
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198715ASPNIDRAFT_198715Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198715-T1ASPNIDRAFT_198715-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198715-T1.utr5p1ASPNIDRAFT_198715-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198715-T1.exon1ASPNIDRAFT_198715-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198715-T1.exon2ASPNIDRAFT_198715-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198715-T1.exon3ASPNIDRAFT_198715-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198715-T1.exon4ASPNIDRAFT_198715-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198715-T1.exon5ASPNIDRAFT_198715-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198715-T1.cdsASPNIDRAFT_198715-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198715-T1.utr3p1ASPNIDRAFT_198715-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092644ZU
DBxrefInterPro:IPR036219
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR001326
DBxrefInterPro:IPR014717
DBxrefInterPro:IPR018940
DBxrefInterPro:IPR014038
DBxrefPFAM:PF00736
DBxrefPFAM:PF10587
Productelongation factor 1 beta
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:811717..813058 +
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