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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:181956..183833- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_198936-T1 ID=ASPNIDRAFT_198936-T1|Name=ASPNIDRAFT_198936-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1878bp|location=Sequence derived from alignment at ACJE01000021.1:181956..183833- (Aspergillus niger ATCC 1015)
ATGTGCAGTGGAGATGATATTCGAAAATGGAGATTTGCGCAAAGAGAGTT
GTTTCAGGCGAAGTACGAGGAGAGAGAGGTGCAGGAAGAGTTGGTGCCTT
ACCCTCTAGACTCAAAAGATAAGGAGCTGCTGGAGGCCATTCAAACGGAC
AGCCTGGGAGCGTTCCGTGAGGCCTGGAATGGCCTAACCCCGATGGAAAT
GGAGATCCACTGGGGGCGATTGTCGCTGTGGCTATTACGGAATTCTCCTG
AGCTGGCCTTGGAATTCCTCCTAGTCACTTGTCAGGCTTCTGTTAAACCA
GTATTTGCCATGATTGCGGACTGCCTGATCTATTTGGACACTCTTCATTC
TGGTGAGATGCAGCGGTGGAGGAAAAATTCCCACAACTATCAGTCTGTCA
TACGTATCTGCTTGGATCCCATGCAGTGGCCTGTCTCCTATGTGCCGCAG
AAGGGTGTGCGCTTCTACATAAAGAAGGCTGACCGTAGCGCAGTTTATGA
GGCATGGAATCTTGTGGAGACTCGAAAGCACAGATTGAAGGGCGAGACCT
ACCTTGGTTTCATGGGCCGCTTCACGGAATTCAAAGACGTTGACAACGCA
CTCCTGGCACTGCGCCGGGCTGGGCGGCAGTTTTGGAGATTACATCAAAG
TCCTATGGAGATAGCAGTTTCACGCCATTGCAGCAAGCTCTTGGTTCTCG
ACTCGGTTGTGGATGGCCCGGATGGACGCAATTTCCGCATTCTTCCCGAA
CTCCTCAGTATGGGGGTGCAGCCTGACCGAGACATGATGAACGTGGTGCT
CTCTAACGCCTTCAAGACAGGGGATCCTCAACTCGGGCTTGATGTATTGC
GCCATATGAAGGCTCAAGGCTTCCAGCTCGATTCGTACACTTATCTGACT
CTACTTAGCGATGCTGTCGCTCGTCAAGACAGGGAGCGAATGACACACTT
GATGGAGGAACTTGAAAGCCAGCCAGAGCTCAAGAAGAACCCCTATATTG
CGAGCAAGCTCTTCCACTCTCACTTCGTTTTCAACGTCAAGCATCTCGAT
GGTGCTACAGACCGCCGGGAGATTTTCTACTCACTGCTGCGCATGTATTG
TGAGCTGCATGACATAACGCCCCTAAAAGAGCTCTCGATTGTCCCTCGTC
AGTACGATCTTCCAACAACTGGCGAAAAGACCCCACCGTCCGTCATTGCC
TTGTATCTCGTGATTGCGACTTGGCTCCGGTGTCAAGCTCACGTGGGCAG
CGTCGAACGTGTTTATACCAGGTTCCGGGAATTGGTGTTGCAAGGCCACA
AAGACGTAGCCCCTCTAGCTGCGACCGACCATACCTACAATGAGTTCATG
CTTGCGTATCGTAACAATCCACACGGGTTACGGCCCGCTGTGCGCGTTGT
TGAAGACATGTTACAGTCTGCCACTGAGGTTGGCGCCAAAACTGGCAATT
CTGAGTCAACTTTCACGCAGACACAGCCAACGGTCTTGACTTGGACGCTG
CTGTTGAGTGCTTTCATCTATAACAACCAGCCACTCGCGGCTGAGAAGGT
GAGAGAGATGATGGCTAAGCATGGTGTTGTATACAGCATGACTACTTGGA
ATGTCATCATCAGCGGGTTTGCGAGCCAGCAAAATGCATCTGCCATCGCG
CAGTCCATCAAAGATCTCGAAGATCAAGGCCTTTCCATTGATGCTTATAC
GATGAAGGGCCTGCGCTACCTCCGAGACCCGGAGCAGCTCTGGATTGCGG
TGGAGCAGTTGGACCTGAAATCTGCATCTCACTTGAGGAGGGATGCTTTC
AACCAGAACCCCGAATCTCCCCACCTGGACGAAGCGGAAACTGAGCAGCT
GCTCGATCGAGGCCTGCAGCGTCTAAAG back to topCoding sequence (CDS) from alignment at ACJE01000021.1:181956..183833- >ASPNIDRAFT_198936-T1 ID=ASPNIDRAFT_198936-T1|Name=ASPNIDRAFT_198936-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1874bp|location=Sequence derived from alignment at ACJE01000021.1:181956..183833- (Aspergillus niger ATCC 1015)
ATGTGCAGTGGAGATGATATTCGAAAATGGAGATTTGCGCAAAGAGAGTT
GTTTCAGGCGAAGTACGAGGAGAGAGAGGTGCAGGAAGAGTTGGTGCCTT
ACCCTCTAGACTCAAAAGATAAGGAGCTGCTGGAGGCCATTCAAACGGAC
AGCCTGGGAGCGTTCCGTGAGGCCTGGAATGGCCTAACCCCGATGGAAAT
GGAGATCCACTGGGGGCGATTGTCGCTGTGGCTATTACGGAATTCTCCTG
AGCTGGCCTTGGAATTCCTCCTAGTCACTTGTCAGGCTTCTGTTAAACCA
GTATTTGCCATGATTGCGGACTGCCTGATCTATTTGGACACTCTTCATTC
TGGTGAGATGCAGCGGTGGAGGAAAAATTCCCACAACTATCAGTCTGTCA
TACGTATCTGCTTGGATCCCATGCAGTGGCCTGTCTCCTATGTGCCGCAG
AAGGGTGTGCGCTTCTACATAAAGAAGGCTGACCGTAGCGCAGTTTATGA
GGCATGGAATCTTGTGGAGACTCGAAAGCACAGATTGAAGGGCGAGACCT
ACCTTGGTTTCATGGGCCGCTTCACGGAATTCAAAGACGTTGACAACGCA
CTCCTGGCACTGCGCCGGGCTGGGCGGCAGTTTTGGAGATTACATCAAAG
TCCTATGGAGATAGCAGTTTCACGCCATTGCAGCAAGCTCTTGGTTCTCG
ACTCGGTTGTGGATGGCCCGGATGGACGCAATTTCCGCATTCTTCCCGAA
CTCCTCAGTATGGGGGTGCAGCCTGACCGAGACATGATGAACGTGGTGCT
CTCTAACGCCTTCAAGACAGGGGATCCTCAACTCGGGCTTGATGTATTGC
GCCATATGAAGGCTCAAGGCTTCCAGCTCGATTCGTACACTTATCTGACT
CTACTTAGCGATGCTGTCGCTCGTCAAGACAGGGAGCGAATGACACACTT
GATGGAGGAACTTGAAAGCCAGCCAGAGCTCAAGAAGAACCCCTATATTG
CGAGCAAGCTCTTCCACTCTCACTTCGTTTTCAACGTCAAGCATCTCGAT
GGTGCTACAGACCGCCGGGAGATTTTCTACTCACTGCTGCGCATGTATTG
TGAGCTGCATGACATAACGCCCCTAAAAGAGCTCTCGATTGTCCCTCGTC
AGTACGATCTTCCAACAACTGGCGAAAAGACCCCACCGTCCGTCATTGCC
TTGTATCTCGTGATTGCGACTTGGCTCCGGTGTCAAGCTCACGTGGGCAG
CGTCGAACGTGTTTATACCAGGTTCCGGGAATTGGTGTTGCAAGGCCACA
AAGACGTAGCCCCTCTAGCTGCGACCGACCATACCTACAATGAGTTCATG
CTTGCGTATCGTAACAATCCACACGGGTTACGGCCCGCTGTGCGCGTTGT
TGAAGACATGTTACAGTCTGCCACTGAGGTTGGCGCCAAAACTGGCAATT
CTGAGTCAACTTTCACGCAGACACAGCCAACGGTCTTGACTTGGACGCTG
CTGTTGAGTGCTTTCATCTATAACAACCAGCCACTCGCGGCTGAGAAGGT
GAGAGAGATGATGGCTAAGCATGGTGTTGTATACAGCATGACTACTTGGA
ATGTCATCATCAGCGGGTTTGCGAGCCAGCAAAATGCATCTGCCATCGCG
CAGTCCATCAAAGATCTCGAAGATCAAGGCCTTTCCATTGATGCTTATAC
GATGAAGGGCCTGCGCTACCTCCGAGACCCGGAGCAGCTCTGGATTGCGG
TGGAGCAGTTGGACCTGAAATCTGCATCTCACTTGAGGAGGGATGCTTTC
AACCAGAACCCCGAATCTCCCCACCTGGACGAAGCGGAAACTGAGCAGCT
GCTCGATCGAGGCCTGCAGCGTCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR002885 |
| DBxref | InterPro:IPR011990 |
| DBxref | PFAM:PF13812 |
| DBxref | PFAM:PF01535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:181956..183833 - |
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