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ASPNIDRAFT_198959-T1, ASPNIDRAFT_198959-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_198959-T1
Unique NameASPNIDRAFT_198959-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:118146..119631+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_198959-T1 ID=ASPNIDRAFT_198959-T1|Name=ASPNIDRAFT_198959-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1486bp|location=Sequence derived from alignment at ACJE01000021.1:118146..119631+ (Aspergillus niger ATCC 1015)
CCGCTCGACGATATCGACAATTCCCTCGCGGACACACCACAGCCCACGCA
GTCAAGATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAA
TGGTGAGCATTCGATTATTCCCCGATCTTTGTCGCTCTGTTCGCTGGGTG
GACGCGGAGGAGGATCTGGCCGGAGGGACAGGCATGGCATCGAGGATTCT
GGGGGACTTTTAGGAGGCTGAGGATAGCGCTGCGCCAGCTACAACCGGCA
ATCGCTAGGGGGAGAGAATAAAAGAAGAGAGATGCTACACTGAATGCCTG
TCCCTGCGATCTATTCTTGCGATTCAATTTTGCGTGATATGATGGAAAAG
GACATGGGACTGATTCGAATTTCCTCCTACAGTGAAGGTTCACATTCGCT
CGCGCATTGTGACCGTTGAGGGACCCCGAGGTATGCAAATTTTCCAACAA
TCCACCACGACCCGGCCATTTGGAACAATATCGACCAATATGTTCCTCGT
GGCGTGTTGTGACCTACGGCTCGAGCTATGTGCCGCACCCGTCTGTATTC
AGCGACACTAACATGGGTCCTTTTCCCTCCTCTTACAGGCAAGCTCGTCA
AGGACCTCTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTC
ATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCG
TACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCT
TCAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAAC
ATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAGGTATGC
CGAAATCAATTCACTCGCACACGCATCGAAGACTGGGGGATGAGCCGGGA
TCAAACCAAAGGATTATTCTCTTTCCTTTTCCCGGTTGGGTTCTGGCTTC
TACCTACCAGTGCTTGGTCAATTATCATGTTACTGGGAGGAGACATTTTG
CTGATGGGTATTGCGTTCTACAGAAACTTCTTGGGTGAGAAGTACGTCCG
CCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCA
AGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGT
GCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAA
GGTAAGAAAAATGCCGCCTCCCTTTGGTTTCTCGTGAGAGAAAATATCGA
GACCGTCACTGACATGAATGATTTTGCACAGTTCCTTGACGGTCTGTACG
TGTCGGAGCGTGGTAACATTGTCGAGGAGTAAACGGTGGTTGTCCGCCTT
GGTGGGTAGTGACGGATGTCTGGAGAATCTCTTTTTTTCGCCTACTTGCA
TAGGGAAGCAACGCGGAATTTAAAACCAAAATCATGGAATTCAAATGCCC
CTTGACGTGTCTACGGATCGGGATGACTCCTTGTAC
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Coding sequence (CDS) from alignment at ACJE01000021.1:118146..119631+

>ASPNIDRAFT_198959-T1 ID=ASPNIDRAFT_198959-T1|Name=ASPNIDRAFT_198959-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2895bp|location=Sequence derived from alignment at ACJE01000021.1:118146..119631+ (Aspergillus niger ATCC 1015)
ATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAGAATGTGAA
GGTTCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCGAGGCAAGC
TCGTCAAGGACCTCTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAG
AATGTCATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTC
CCTTCGTACCGTCCGCACCCTCATCAACAACCTGATCATCGGTGTCACCA
AGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTCACTTTCCCATCAAC
GTCAACATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAG
AAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGCG
TTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGGT
AACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCTG
CCGTGTCCGCAACAAGGATATCCGTAAGTTCCTTGACGGTCTGTACGTGT
CGGAGCGTGGTAACATTGTCGAGGAGTAAATGCGGTACATTTACTCCGAG
GAACGGCTGCCCATCCCCGAGAATGTGAAGGTTCACATTCGCTCGCGCAT
TGTGACCGTTGAGGGACCCCGAGGCAAGCTCGTCAAGGACCTCTCCCACA
TTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCATTGAGATG
CACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCT
CATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGTACAAGATGC
GCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAGAAGAACCCC
GAGACCGGTCTGCACGACGTTGAGATCAGAAACTTCTTGGGTGAGAAGTA
CGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCA
ACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCC
CAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATAT
CCGTAAGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTCG
AGGAGTAAATGCGGTACATTTACTCCGAGGAACGGCTGCCCATCCCCGAG
AATGTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTGAGGGACCCCG
AGGCAAGCTCGTCAAGGACCTCTCCCACATTGCTGTCACCTTCGGCCGCC
CCGAGAAGAATGTCATCTCCATTGAGATGCACCACGGTGTCCGCAAGGGA
ATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAACAACCTGATCATCGG
TGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGTCTACGCTCACTTTC
CCATCAACGTCAACATTGAGAAGAACCCCGAGACCGGTCTGCACGACGTT
GAGATCAGAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTGACCGCCCA
GCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATGAGCTCGTCC
TCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCGACATCCAG
CAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGTTCCTTGACGGTCT
GTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTAAATGCGGTACATTT
ACTCCGAGGAACGGCTGCCCATCCCCGAGAATGTGAAGGTTCACATTCGC
TCGCGCATTGTGACCGTTGAGGGACCCCGAGGCAAGCTCGTCAAGGACCT
CTCCCACATTGCTGTCACCTTCGGCCGCCCCGAGAAGAATGTCATCTCCA
TTGAGATGCACCACGGTGTCCGCAAGGGAATGGCTTCCCTTCGTACCGTC
CGCACCCTCATCAACAACCTGATCATCGGTGTCACCAAGGGCTTCAAGTA
CAAGATGCGCTACGTCTACGCTCACTTTCCCATCAACGTCAACATTGAGA
AGAACCCCGAGACCGGTCTGCACGACGTTGAGATCAGAAACTTCTTGGGT
GAGAAGTACGTCCGCCGTGTGACCGCCCAGCCTGGCGTTGAGGTCATCAC
CTCTCCCAACGTCAAGGATGAGCTCGTCCTCTCCGGTAACTCCCTGGAGG
GTGTCTCCCAGAGTGCTGCCGACATCCAGCAGATCTGCCGTGTCCGCAAC
AAGGATATCCGTAAGTTCCTTGACGGTCTGTACGTGTCGGAGCGTGGTAA
CATTGTCGAGGAGTAAATGCGGTACATTTACTCCGAGGAACGGCTGCCCA
TCCCCGAGAATGTGAAGGTTCACATTCGCTCGCGCATTGTGACCGTTGAG
GGACCCCGAGGCAAGCTCGTCAAGGACCTCTCCCACATTGCTGTCACCTT
CGGCCGCCCCGAGAAGAATGTCATCTCCATTGAGATGCACCACGGTGTCC
GCAAGGGAATGGCTTCCCTTCGTACCGTCCGCACCCTCATCAACAACCTG
ATCATCGGTGTCACCAAGGGCTTCAAGTACAAGATGCGCTACGTCTACGC
TCACTTTCCCATCAACGTCAACATTGAGAAGAACCCCGAGACCGGTCTGC
ACGACGTTGAGATCAGAAACTTCTTGGGTGAGAAGTACGTCCGCCGTGTG
ACCGCCCAGCCTGGCGTTGAGGTCATCACCTCTCCCAACGTCAAGGATGA
GCTCGTCCTCTCCGGTAACTCCCTGGAGGGTGTCTCCCAGAGTGCTGCCG
ACATCCAGCAGATCTGCCGTGTCCGCAACAAGGATATCCGTAAGTTCCTT
GACGGTCTGTACGTGTCGGAGCGTGGTAACATTGTCGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL9BASPNIDRAFT_198959Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198959-T1ASPNIDRAFT_198959-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198959-T1.utr5p1ASPNIDRAFT_198959-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198959-T1.exon1ASPNIDRAFT_198959-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198959-T1.exon2ASPNIDRAFT_198959-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198959-T1.exon3ASPNIDRAFT_198959-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198959-T1.exon4ASPNIDRAFT_198959-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_198959-T1.exon5ASPNIDRAFT_198959-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198959-T1.cdsASPNIDRAFT_198959-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_198959-T1.utr3p1ASPNIDRAFT_198959-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002359
DBxrefInterPro:IPR000702
DBxrefInterPro:IPR036789
DBxrefInterPro:IPR020040
DBxrefPFAM:PF00347
Product60S ribosomal protein L9B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:118146..119631 +
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