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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000019.1:418593..420026+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_199085-T1 ID=ASPNIDRAFT_199085-T1|Name=ASPNIDRAFT_199085-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1434bp|location=Sequence derived from alignment at ACJE01000019.1:418593..420026+ (Aspergillus niger ATCC 1015) CGAGTTTGACTCCTCTCAATCACCACCGGCACCTTCCTGCGCCGTGACTT
CGCCGGCCAAAGTGGTCTTGCATTAACCCAGTATTGATGATCCTCAGTAC
CTGCCCATCCTTCTGATCAAAAACCCTCGCACCTCGATTCTTGACCCCTC
CTCTCCTCCGTCAAAAGTAAGATACACAATAAGCCGGTTATTGAACTGTG
TCCGCCCTCTCAACCTGCGACGTTGATAAAGTGAATTATCGCCGGGATAT
CTTGTTCCCACCATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCT
TTCCAGCGCCAGCTTAGTTGCAGCGCAGACATACACCAATTGTAACCCAT
TGAAAAAATGTAAGTGTCCAAATCGTGCGTGTGATGGGCATGCGCAGCTA
ATACTTCTAAAGCATGCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGC
TATGACTTCACCCAAGGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCC
GACCTATGGTAAAGATGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATG
CGCCATTGATCCAGTCCAACTGGTACATCATGTTTGGGCACGTGGAATAC
GTGATTAAGGCTGCCCCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCA
GTCAGATGATTTGGATGAGATCGACTGGGAATGGCTTGGAGGGAACGATC
AGCTTGTGCAAACGAACTATTTCGGCAAAGGAGATACCAGTAGTTACAAT
CGTGGAGCTACCCATAATGATCCTGGGAACCATGACGACTTTCACACCTA
TACCGTGGACTGGACGAGCAAGCAAATCGTCTGGCAAATCGATGGCACAA
CGGTCAGAGTGCTTACGCCGGACACTGCTGATACGAATCAGTACCCCCAA
ACTCCCATGGTGGTCAAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAA
CCCTCAGGGCACAATCGGTGAGTGTCTAGCCCCTTGTCACTGCAATATTC
CCTTTCCCCTGGTGTGAAATATGCTGATTTTTGTCTTAGATTGGGCTGGT
GGCACGACCGATTACAGCGCCGGACCTTACACAATGTATTTGAAGTCTCT
CAAAGTGACGGATTATTCGACCGGCTCGTCATACTCATATGGTGATGAGA
GCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCAGGTTAATGGGAAC
ATTGGGGCCGATACGATGACCTCAATTGAGTCAGCACCCACTGTGACGTC
GACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACTCATCGTGAAACAT
CCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGCGACAGCAACATCG
ACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTCGGCAAACCCAGCC
GCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCT back to topCoding sequence (CDS) from alignment at ACJE01000019.1:418593..420026+ >ASPNIDRAFT_199085-T1 ID=ASPNIDRAFT_199085-T1|Name=ASPNIDRAFT_199085-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3141bp|location=Sequence derived from alignment at ACJE01000019.1:418593..420026+ (Aspergillus niger ATCC 1015) ATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAG CTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATCAT GCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCAA GGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAGA TGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAGT CCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGCC CCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGGA TGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACGA ACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCAT AATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGAC GAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTTA CGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGTC AAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAAT CGATTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGT ATTTGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCA TATGGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCA GGTTAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCAC CCACTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACT CATCGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGC GACAGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTC GGCAAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTATG AGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAGCTT AGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATCATGCC CCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCAAGGT AGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAGATGG TGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAGTCCA ACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGCCCCC GGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGGATGA GATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACGAACT ATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCATAAT GATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGACGAG CAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTTACGC CGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGTCAAA GTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAATCGA TTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGTATT TGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCATAT GGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCAGGT TAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCACCCA CTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACTCAT CGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGCGAC AGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTCGGC AAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTATGAGA CTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAGCTTAGT TGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATCATGCCCCG CGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCAAGGTAGT TCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAGATGGTGC CGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAGTCCAACT GGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGCCCCCGGA ACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGGATGAGAT CGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACGAACTATT TCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCATAATGAT CCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGACGAGCAA GCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTTACGCCGG ACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGTCAAAGTA GGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAATCGATTG GGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGTATTTGA AGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCATATGGT GATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCAGGTTAA TGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCACCCACTG TGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACTCATCGT GAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGCGACAGC AACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTCGGCAAA CCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005618 | cell wall |
Vocabulary: Molecular Function
Term | Definition |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
Term | Definition |
GO:0071555 | cell wall organization |
GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-21) |
Note | CAZy:GH16 |
DBxref | InterPro:IPR013320 |
DBxref | InterPro:IPR017168 |
DBxref | InterPro:IPR000757 |
DBxref | PFAM:PF00722 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ACJE01000019.1 | supercontig | ACJE01000019.1:418593..420026 + |
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