You are here

Home

ASPNIDRAFT_199211-T1, ASPNIDRAFT_199211-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199211-T1
Unique NameASPNIDRAFT_199211-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:807245..809328+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199211-T1 ID=ASPNIDRAFT_199211-T1|Name=ASPNIDRAFT_199211-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2084bp|location=Sequence derived from alignment at ACJE01000019.1:807245..809328+ (Aspergillus niger ATCC 1015)
GTCAGCGTGGAAATCTCCTCTGTGGCGTGGTCATCCGCCTGCATGCTAGC
TACTAGTTACTGTTGGTTGCATCGTACCGGACCTTTCCGCAGCTTATCGT
GATTCCTCTTCATATAATTCCGAAAAACCACCACAGCTGAACGGTGAACC
TTGACACCAGGCACCACTTTTAAAATTCGCCATCAGCGCAGTTATATATC
TGCGATATCCAGGTCCCTGCTTTCTCAATAATTTGTGTCGTCATTAAGGC
CTGGACCACGATCTCTGGTCTGGAAAACTTTGAGATCGGGCCAAATCTCC
ACCGCGACTCGACTAGTGTCGATATTATTCCATTTTTATACACTTTCGCC
TGGTTGCGCTACACCGCTGGTCTTACGCTCGGGATCTTGTGGAACGCCAA
CCCATCATTTTATCGATGCTTGATCCTATTTGAATGTCCACTGGGCAACA
TTTCACAAGCAAGAACGGAGTCAATTGACATCGTTCACTCTGATCAAGTG
ATAGAATAAGAAGCACACATTTATACACAGTCATCATGGCTCCTCTGGGC
GAAACGATCGCTGTGATTGACAAGTCCGGTAAGGTGGTGAGCACGGTACG
TATACGATCATACTTCCCCGTACACTGACATGCGATACTGACATATGACG
GATCATAGAGCAAGCACCTGTTCGGCGTGTTCAGTCAAGCCAAGAATGCC
TATCGCGAGCGCAAAGCTCAATTTCAGTCTGAACGGAACGCCAAGATTGC
CGAGAAGGAGGCACTGAGGGCTCTTGAGAACTACCATATCGATGATGCGC
CTTCAGTCGCATCCTCTCGAAGGAGCCGTTCCCGACACCATTCAGGCCGC
AGCCACTACGCTCGTGAACCTTCGGTCTATGAAGAAAATGTGCAATGGCA
GGACCCTTATGCCGATCCTTATGGTGTTCGACCAGGGGAAATGGTCCGCC
GTCATACCCATGACGTCGCCATGCGTGGTCCAGAGCGACCAACCACCAGC
CGCTCCAAGTCCGATGCTCATGTCGACATGGACCTAGCATACGGCGACTT
CCACCCTTCGGCCCTAGAGACAGTACCACCACCTCCCGAACCACAAAACC
AGCTCCAAAGAATTGAGAATCCGGAACTAAATACTCTTGTGGATCGGGCG
CAGTGGCTCCTAGAGGAAGCTGACTGCATGCAACATACTGCGACCGCCAC
TATTGCACATCTTCAGAAGAATCCAGATGCCATGGCTGCTGTAGCTCTCA
CCTTGGCCGAGATCAGCAACATAGCCACAAAGATGGCCCCATCTGCGCTT
TCAACCCTCAAGGCTGCGGCCCCAACAGTCTTCGCCCTGCTTGCAAGCCC
ACAATTCTTGATCGCAGCGGGTGTTGGTATCGGAGTCACGATTGTCATGT
TTGGTGGCTACAAGATTGTCAAGCAGATCCAGAACGCCACCACCGCTACT
CCCAGCAGCCCTATGAGGGCAGCGGCAGCTCCCGAGGAAGATCCTGGCAT
GGATGACATGATGGAGTTTAACACCGAATGTCTAAGCACTGTCGAAATGT
GGCGGCGCGGCGTAGCGGACGCCGAGGCCGACAGCGTTGGCACGTCCGTC
GATGGAGAGTTCATCACACCTAAAGCAGCAGCAATGTCAGGCATTGATGT
GACTACGGCACGAATGTCGCGGGACCCGCGATTCAAGTTCGACGACGATG
ATCAGTCGATGGCATCATCTCGCAGATCTCGTCGGTCGCGCAGCCATCGT
GAAGGATCTCGTGCCAACCACCGACCAGAGTCGCACGTCAGCTCGAGGGC
ACCTTCCAAAGTTTTCTCGAAAGCGCCATCGAAGGCACCGTCCAGAGCGC
CCTCATACGCACCTTCCAGAGCCGAATCGCGTTACTCGGACATGGAACCT
AAGCCGAAGGAGAAGAAGAAGCGATCCAGCCGTTTGCGTTTGATGTTCAC
TGCTTGATTTCTACACCTCTATATTTTTTAAACGACAGATCGACACTTTA
CGACATGTATATAATATTGTATACTGCGATTCCGGATAACATTACGACAG
GATGGATATTTGCTTGGCGCAATTAGAATTAGCG
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:807245..809328+

>ASPNIDRAFT_199211-T1 ID=ASPNIDRAFT_199211-T1|Name=ASPNIDRAFT_199211-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2718bp|location=Sequence derived from alignment at ACJE01000019.1:807245..809328+ (Aspergillus niger ATCC 1015)
ATGGCTCCTCTGGGCGAAACGATCGCTGTGATTGACAAGTCCGGTAAGGT
GGTGAGCACGAGCAAGCACCTGTTCGGCGTGTTCAGTCAAGCCAAGAATG
CCTATCGCGAGCGCAAAGCTCAATTTCAGTCTGAACGGAACGCCAAGATT
GCCGAGAAGGAGGCACTGAGGGCTCTTGAGAACTACCATATCGATGATGC
GCCTTCAGTCGCATCCTCTCGAAGGAGCCGTTCCCGACACCATTCAGGCC
GCAGCCACTACGCTCGTGAACCTTCGGTCTATGAAGAAAATGTGCAATGG
CAGGACCCTTATGCCGATCCTTATGGTGTTCGACCAGGGGAAATGGTCCG
CCGTCATACCCATGACGTCGCCATGCGTGGTCCAGAGCGACCAACCACCA
GCCGCTCCAAGTCCGATGCTCATGTCGACATGGACCTAGCATACGGCGAC
TTCCACCCTTCGGCCCTAGAGACAGTACCACCACCTCCCGAACCACAAAA
CCAGCTCCAAAGAATTGAGAATCCGGAACTAAATACTCTTGTGGATCGGG
CGCAGTGGCTCCTAGAGGAAGCTGACTGCATGCAACATACTGCGACCGCC
ACTATTGCACATCTTCAGAAGAATCCAGATGCCATGGCTGCTGTAGCTCT
CACCTTGGCCGAGATCAGCAACATAGCCACAAAGATGGCCCCATCTGCGC
TTTCAACCCTCAAGGCTGCGGCCCCAACAGTCTTCGCCCTGCTTGCAAGC
CCACAATTCTTGATCGCAGCGGGTGTTGGTATCGGAGTCACGATTGTCAT
GTTTGGTGGCTACAAGATTGTCAAGCAGATCCAGAACGCCACCACCGCTA
CTCCCAGCAGCCCTATGAGGGCAGCGGCAGCTCCCGAGGAAGATCCTGGC
ATGGATGACATGATGGAGTTTAACACCGAATGTCTAAGCACTGTCGAAAT
GTGGCGGCGCGGCGTAGCGGACGCCGAGGCCGACAGCGTTGGCACGTCCG
TCGATGGAGAGTTCATCACACCTAAAGCAGCAGCAATGTCAGGCATTGAT
GTGACTACGGCACGAATGTCGCGGGACCCGCGATTCAAGTTCGACGACGA
TGATCAGTCGATGGCATCATCTCGCAGATCTCGTCGGTCGCGCAGCCATC
GTGAAGGATCTCGTGCCAACCACCGACCAGAGTCGCACGTCAGCTCGAGG
GCACCTTCCAAAGTTTTCTCGAAAGCGCCATCGAAGGCACCGTCCAGAGC
GCCCTCATACGCACCTTCCAGAGCCGAATCGCGTTACTCGGACATGGAAC
CTAAGCCGAAGGAGAAGAAGAAGCGATCCAGCCGTTTGCGTTTGATGTTC
ACTGCTTGAATGGCTCCTCTGGGCGAAACGATCGCTGTGATTGACAAGTC
CGGTAAGGTGGTGAGCACGAGCAAGCACCTGTTCGGCGTGTTCAGTCAAG
CCAAGAATGCCTATCGCGAGCGCAAAGCTCAATTTCAGTCTGAACGGAAC
GCCAAGATTGCCGAGAAGGAGGCACTGAGGGCTCTTGAGAACTACCATAT
CGATGATGCGCCTTCAGTCGCATCCTCTCGAAGGAGCCGTTCCCGACACC
ATTCAGGCCGCAGCCACTACGCTCGTGAACCTTCGGTCTATGAAGAAAAT
GTGCAATGGCAGGACCCTTATGCCGATCCTTATGGTGTTCGACCAGGGGA
AATGGTCCGCCGTCATACCCATGACGTCGCCATGCGTGGTCCAGAGCGAC
CAACCACCAGCCGCTCCAAGTCCGATGCTCATGTCGACATGGACCTAGCA
TACGGCGACTTCCACCCTTCGGCCCTAGAGACAGTACCACCACCTCCCGA
ACCACAAAACCAGCTCCAAAGAATTGAGAATCCGGAACTAAATACTCTTG
TGGATCGGGCGCAGTGGCTCCTAGAGGAAGCTGACTGCATGCAACATACT
GCGACCGCCACTATTGCACATCTTCAGAAGAATCCAGATGCCATGGCTGC
TGTAGCTCTCACCTTGGCCGAGATCAGCAACATAGCCACAAAGATGGCCC
CATCTGCGCTTTCAACCCTCAAGGCTGCGGCCCCAACAGTCTTCGCCCTG
CTTGCAAGCCCACAATTCTTGATCGCAGCGGGTGTTGGTATCGGAGTCAC
GATTGTCATGTTTGGTGGCTACAAGATTGTCAAGCAGATCCAGAACGCCA
CCACCGCTACTCCCAGCAGCCCTATGAGGGCAGCGGCAGCTCCCGAGGAA
GATCCTGGCATGGATGACATGATGGAGTTTAACACCGAATGTCTAAGCAC
TGTCGAAATGTGGCGGCGCGGCGTAGCGGACGCCGAGGCCGACAGCGTTG
GCACGTCCGTCGATGGAGAGTTCATCACACCTAAAGCAGCAGCAATGTCA
GGCATTGATGTGACTACGGCACGAATGTCGCGGGACCCGCGATTCAAGTT
CGACGACGATGATCAGTCGATGGCATCATCTCGCAGATCTCGTCGGTCGC
GCAGCCATCGTGAAGGATCTCGTGCCAACCACCGACCAGAGTCGCACGTC
AGCTCGAGGGCACCTTCCAAAGTTTTCTCGAAAGCGCCATCGAAGGCACC
GTCCAGAGCGCCCTCATACGCACCTTCCAGAGCCGAATCGCGTTACTCGG
ACATGGAACCTAAGCCGAAGGAGAAGAAGAAGCGATCCAGCCGTTTGCGT
TTGATGTTCACTGCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199211ASPNIDRAFT_199211Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199211-T1.utr5p1ASPNIDRAFT_199211-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199211-T1.exon1ASPNIDRAFT_199211-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199211-T1.exon2ASPNIDRAFT_199211-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199211-T1.cdsASPNIDRAFT_199211-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199211-T1.utr3p1ASPNIDRAFT_199211-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199211-T1ASPNIDRAFT_199211-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:807245..809328 +
Powered by Drupal