You are here

Home

ASPNIDRAFT_199434-T1, ASPNIDRAFT_199434-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199434-T1
Unique NameASPNIDRAFT_199434-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1874064..1875056+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199434-T1 ID=ASPNIDRAFT_199434-T1|Name=ASPNIDRAFT_199434-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=993bp|location=Sequence derived from alignment at ACJE01000019.1:1874064..1875056+ (Aspergillus niger ATCC 1015)
ATGGCCTCAATTCTTCCCCGTGTTGGCTTCCGCGCCTTGACCGCTCTGCC
CAGAGCCACCCCTCTTCCCCGGGTGTCTCTCACGCAGCTCTCTCGCGTGC
AGCCCCGCGTGCAGCCCCTCACTCGCCGGTTCCTCGCAACCATTCCTCAG
GAGCAGCCTCGTCTGCGTCTTGGATCGACCGGTAGGCCAACCTTTCCAAT
TTTACCGCGCCAATTGTACACACACTAACCGGCGTAGCTCCCAACTTCAA
GGCCCTTACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCAACA
GCTGGGCCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGCACC
ACCGAGCTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAGGGG
TGTCAAGATGATCGGTCTGGTGAGTGGTCTAGGAACACAATTTCGGGTCG
GCCGCTAACAGTCAATGAACCTCTAGAGCGCCAACGATCTCAGCTCCCAC
GACCAGTGGATCGATGACATCAACGAGGTTGCCAACACCAACGTTCAGTT
CCCCATCATCGCCGATGCCGACCGCAAGGTCGCCTTCCTTTACGACATGG
TTGACCAGCGCGACTTGGACAACATTGCTGAGAAGGGTATTCCGTTCACC
ATCCGCTCCGTCTTCATCATCGACCCCGAGAAGAAGATCCGTCTCACCAT
GTCGTACCCTGCCTCGACTGGCCGCAACTCGGCGGAGGTCCTGCGCGTCA
TCGACTCCCTGCAGACTGCTGACCGCAAGGGTATTGCCACTCCCATTGAC
TGGCAGGTCGGCGAGGATGTGATTGTGCCCCCGTCGGTGTCGACCGAGGA
TGCCAAGAAGAAGTTTGGCGAGGTGCGCGAGCTGAAGCCGTACCTCCGTT
ACACCAAGTACTAGAGTGCTTGAGCGGGGATGAGAGATTGTAACAACAGT
AAAATGTGCAACAATATATATCACTTATATATCAACGGAATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:1874064..1875056+

>ASPNIDRAFT_199434-T1 ID=ASPNIDRAFT_199434-T1|Name=ASPNIDRAFT_199434-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2403bp|location=Sequence derived from alignment at ACJE01000019.1:1874064..1875056+ (Aspergillus niger ATCC 1015)
ATGGCCTCAATTCTTCCCCGTGTTGGCTTCCGCGCCTTGACCGCTCTGCC
CAGAGCCACCCCTCTTCCCCGGGTGTCTCTCACGCAGCTCTCTCGCGTGC
AGCCCCGCGTGCAGCCCCTCACTCGCCGGTTCCTCGCAACCATTCCTCAG
GAGCAGCCTCGTCTGCGTCTTGGATCGACCGCTCCCAACTTCAAGGCCCT
TACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCAACAGCTGGG
CCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGCACCACCGAG
CTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAGGGGTGTCAA
GATGATCGGTCTGAGCGCCAACGATCTCAGCTCCCACGACCAGTGGATCG
ATGACATCAACGAGGTTGCCAACACCAACGTTCAGTTCCCCATCATCGCC
GATGCCGACCGCAAGGTCGCCTTCCTTTACGACATGGTTGACCAGCGCGA
CTTGGACAACATTGCTGAGAAGGGTATTCCGTTCACCATCCGCTCCGTCT
TCATCATCGACCCCGAGAAGAAGATCCGTCTCACCATGTCGTACCCTGCC
TCGACTGGCCGCAACTCGGCGGAGGTCCTGCGCGTCATCGACTCCCTGCA
GACTGCTGACCGCAAGGGTATTGCCACTCCCATTGACTGGCAGGTCGGCG
AGGATGTGATTGTGCCCCCGTCGGTGTCGACCGAGGATGCCAAGAAGAAG
TTTGGCGAGGTGCGCGAGCTGAAGCCGTACCTCCGTTACACCAAGTACTA
GATGGCCTCAATTCTTCCCCGTGTTGGCTTCCGCGCCTTGACCGCTCTGC
CCAGAGCCACCCCTCTTCCCCGGGTGTCTCTCACGCAGCTCTCTCGCGTG
CAGCCCCGCGTGCAGCCCCTCACTCGCCGGTTCCTCGCAACCATTCCTCA
GGAGCAGCCTCGTCTGCGTCTTGGATCGACCGCTCCCAACTTCAAGGCCC
TTACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCAACAGCTGG
GCCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGCACCACCGA
GCTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAGGGGTGTCA
AGATGATCGGTCTGAGCGCCAACGATCTCAGCTCCCACGACCAGTGGATC
GATGACATCAACGAGGTTGCCAACACCAACGTTCAGTTCCCCATCATCGC
CGATGCCGACCGCAAGGTCGCCTTCCTTTACGACATGGTTGACCAGCGCG
ACTTGGACAACATTGCTGAGAAGGGTATTCCGTTCACCATCCGCTCCGTC
TTCATCATCGACCCCGAGAAGAAGATCCGTCTCACCATGTCGTACCCTGC
CTCGACTGGCCGCAACTCGGCGGAGGTCCTGCGCGTCATCGACTCCCTGC
AGACTGCTGACCGCAAGGGTATTGCCACTCCCATTGACTGGCAGGTCGGC
GAGGATGTGATTGTGCCCCCGTCGGTGTCGACCGAGGATGCCAAGAAGAA
GTTTGGCGAGGTGCGCGAGCTGAAGCCGTACCTCCGTTACACCAAGTACT
AGATGGCCTCAATTCTTCCCCGTGTTGGCTTCCGCGCCTTGACCGCTCTG
CCCAGAGCCACCCCTCTTCCCCGGGTGTCTCTCACGCAGCTCTCTCGCGT
GCAGCCCCGCGTGCAGCCCCTCACTCGCCGGTTCCTCGCAACCATTCCTC
AGGAGCAGCCTCGTCTGCGTCTTGGATCGACCGCTCCCAACTTCAAGGCC
CTTACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCAACAGCTG
GGCCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGCACCACCG
AGCTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAGGGGTGTC
AAGATGATCGGTCTGAGCGCCAACGATCTCAGCTCCCACGACCAGTGGAT
CGATGACATCAACGAGGTTGCCAACACCAACGTTCAGTTCCCCATCATCG
CCGATGCCGACCGCAAGGTCGCCTTCCTTTACGACATGGTTGACCAGCGC
GACTTGGACAACATTGCTGAGAAGGGTATTCCGTTCACCATCCGCTCCGT
CTTCATCATCGACCCCGAGAAGAAGATCCGTCTCACCATGTCGTACCCTG
CCTCGACTGGCCGCAACTCGGCGGAGGTCCTGCGCGTCATCGACTCCCTG
CAGACTGCTGACCGCAAGGGTATTGCCACTCCCATTGACTGGCAGGTCGG
CGAGGATGTGATTGTGCCCCCGTCGGTGTCGACCGAGGATGCCAAGAAGA
AGTTTGGCGAGGTGCGCGAGCTGAAGCCGTACCTCCGTTACACCAAGTAC
TAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016209antioxidant activity
GO:0051920peroxiredoxin activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRX1_2ASPNIDRAFT_199434Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199434-T1.exon1ASPNIDRAFT_199434-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199434-T1.exon2ASPNIDRAFT_199434-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199434-T1.exon3ASPNIDRAFT_199434-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199434-T1.cdsASPNIDRAFT_199434-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199434-T1.utr3p1ASPNIDRAFT_199434-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199434-T1ASPNIDRAFT_199434-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR013766
DBxrefInterPro:IPR000866
DBxrefInterPro:IPR019479
DBxrefInterPro:IPR024706
DBxrefPFAM:PF08534
DBxrefPFAM:PF00578
DBxrefPFAM:PF10417
Productperoxiredoxin 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1874064..1875056 +
Powered by Drupal