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ASPNIDRAFT_199933-T1, ASPNIDRAFT_199933-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199933-T1
Unique NameASPNIDRAFT_199933-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1835793..1836799-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199933-T1 ID=ASPNIDRAFT_199933-T1|Name=ASPNIDRAFT_199933-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1007bp|location=Sequence derived from alignment at ACJE01000009.1:1835793..1836799- (Aspergillus niger ATCC 1015)
CTCACCGTCGTCAACCTCAACCACCCCCCCCAAACAACCGTCAAAATGGA
GAACGAGAAGGGAGAGATCGTCGATCTGTATGTATCCATTCCTTCCAAAA
CCAAATAATGTTGAGTTTGTGTGTGGTGCGAGATGGAGATATGGATGCGA
TTCGGTGCTCGATATACGATGATATGATATGGCTTGGAGAGATATATCGC
GGATATGTGCTACGGCGGGGAACATTATTGTCGAATCGACGAGGACATGG
TTTTTAAATCAGGATCTACGATATGGAAGAGACGGAATTGAAGAAATATA
CGGAGAAAGGACAGGAGAAGGAAAGAGGAGGAATACCGAACACCGATCGC
ATCGCATATCTCTATCATCATCATCATCCAACGTCTCAATACATGCGCAA
TCGCCAAAAGGACAAGCCAAGGCAAATTGCTAATATTAAATTTAACAGCT
ACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCAACGAC
CACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGCCGCTA
CACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGCCCGTG
GTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCTACGTC
CGCAACGTCTGGACCGCTGCCCGCCAGCGCTAAGCACTTTTCCTTTTTGA
GAGAGACGTGCGGTGTTGGGATGAATTTGGAAGTGGGTGGTTATTGATGA
TGGTACGTTTTACGCCACTTTACACCCATGTCTTTACATGGCATATATGA
TTATTATAAAAAGAACGCAATGCTAATGATTGTGGTGGCACAGGATGAAG
ATATTTAACTATATCTCCACAAAAAAGGGAATCCTTTCACACAATGAAAT
GAAAAAACTTTTCCAATTTAACTTTTCTATCAACAATTCAATTTCCATCC
TGCTTTCATTTTTTATCTCCTCTCTTGTGTAGGGTGGAGTATATCCCCCT
CTACATG
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Coding sequence (CDS) from alignment at ACJE01000009.1:1835793..1836799-

>ASPNIDRAFT_199933-T1 ID=ASPNIDRAFT_199933-T1|Name=ASPNIDRAFT_199933-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=534bp|location=Sequence derived from alignment at ACJE01000009.1:1835793..1836799- (Aspergillus niger ATCC 1015)
CTACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCAACG
ACCACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGCCGC
TACACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGCCCG
TGGTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCTACG
TCCGCAACGTCTGGACCGCTGCCCGCCAGCGCTAAATGGAGAACGAGAAG
GGAGAGATCGTCGATCTCTACGTCCCCCGCAAGTGCAGCGCCACCAACCG
CATCATCAAGGCCAACGACCACGCCTCCGTCCAGATCTCCATCGCCAAGG
TTGACGAGAACGGCCGCTACACCGGTGAGAACCACACCTACGCTCTGTGC
GGCTTCATCCGTGCCCGTGGTGAGAGCGATGACTCCCTGAACCGCCTTGC
CCAGCGTGACGGCTACGTCCGCAACGTCTGGACCGCTGCCCGCCAGCGCT
AAATGGAGAACGAGAAGGGAGAGATCGTCGATCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS21ASPNIDRAFT_199933Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199933-T1ASPNIDRAFT_199933-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199933-T1.cdsASPNIDRAFT_199933-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199933-T1.utr3p2ASPNIDRAFT_199933-T1.utr3p2Aspergillus niger ATCC 1015three_prime_UTR
ASPNIDRAFT_199933-T1.utr3p1ASPNIDRAFT_199933-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199933-T1.exon3ASPNIDRAFT_199933-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199933-T1.exon2ASPNIDRAFT_199933-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199933-T1.exon1ASPNIDRAFT_199933-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199933-T1.utr5p1ASPNIDRAFT_199933-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018279
DBxrefInterPro:IPR038579
DBxrefInterPro:IPR001931
DBxrefPFAM:PF01249
Product40S ribosomal protein S21
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1835793..1836799 -
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