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ASPNIDRAFT_199998-T1, ASPNIDRAFT_199998-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199998-T1
Unique NameASPNIDRAFT_199998-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1645807..1647280-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199998-T1 ID=ASPNIDRAFT_199998-T1|Name=ASPNIDRAFT_199998-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1474bp|location=Sequence derived from alignment at ACJE01000009.1:1645807..1647280- (Aspergillus niger ATCC 1015)
TTGCCTTGTCTGCCGTCATTGCAACCCACCCACCAGGACAATGTTCCTCC
AACGCACAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCGGGCTCTCGCT
GCCCGTCCCTTTTCTTCCTCCGTCACCCGCTGTACGTGACCCTCATCGTC
AGATCAAAAGACCGCCTCTTCTGCACCCCAGCAGTGGCAGCCATCCCTTC
TCTACCGCGCTGCCATGGCCTCTATATGTGCCAATTGCACGGGAATGTGG
ATGTCTGATCTGGATATACGAGCTAACATGCCATTGCTGCTCCTATAGTC
AACAGCAAGAAGTATGAGGTGAAGCAGGAGGGCAAGATCCTTTCTTTCGA
TGGTGAGTGGCCTCACATCCACTCCTACATGAAGCGTCAATTATCCCTAC
GGATACACGTGCAAGATAGCAATTGCGACTCGTACGGCGAGTGAACATTG
CAATTGGGCATCTTATGCGGGGTTTCGGGCGCTGGGGACATTTGATAGCC
GGCTACTTGCATCCTCTCGATGCCTTGATATATGGTTGACATCATACTGA
TTGTGCGCTTTTTTCCTGAACAGAGATCAAGACCGAGGAAGACCTCATCC
CCCCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATATCGAGCACGCCACT
GGTCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGGGCATTGATATCTT
CGACATGCGTCCCCTCGATGCCTCCCGCAAGGGTATGTCATACGCTATTC
CGCTCTGTGCGGTGTCTACCGGAGTCTTGAATAGATGACTCGCGCGGGTG
GGAGCTGATATAATGTTTTATAGGAACCCTCGAGAACCCCATCATCGTCA
ACGGTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGTTTCCCCGCCGAC
TCTCACCAGGTCAACTGGCTGACTGTAAGCCGAATTCTTCCGTGCTGTTT
ACCTCCTGTGATAGCATGATCCCTAATCAAGCCACAATACAGGTCTCCCG
TGACCGCCCCATCGAGCGCTGCGGCGAGTGCGGTAACGTTGTCAAGCTGA
ACTACGTCGGCCCCTTGGAGGACCCCCACGCTCGTAAGTAACTTCCCTTT
CAATTCAGCCCCAGTTGATGGCTATCATTCGGTGTGCGGTGTACTAATTG
CTCTCTGTCCAGACGACCACGACCACGGTCACGGCCACCCTCCCCATGAG
GAGCCCAAGACCTTCGCCGACTTCGTCAAGCCTGAGTACTGGTACCGGTA
AATACAATGTACTACTACAATGAATGGAGCGATTGTCCTTTTTCTTTTTT
TCCCACTTCCCTACTTAGGTGCTACTTCTTCGATTCGGAGCAAAGAGAAA
CAATTGGAGTGAAGCGAGATACCAAAAGGAAAAGACAATCCGACATATAA
TCTGTATTGTGTACATGCGTGAGACAGGGTGTGTTCTGGCAAGACAGTCA
CAAAAGAGTGAGAGAGATAGAGAT
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Coding sequence (CDS) from alignment at ACJE01000009.1:1645807..1647280-

>ASPNIDRAFT_199998-T1 ID=ASPNIDRAFT_199998-T1|Name=ASPNIDRAFT_199998-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3510bp|location=Sequence derived from alignment at ACJE01000009.1:1645807..1647280- (Aspergillus niger ATCC 1015)
ACGACCACGACCACGGTCACGGCCACCCTCCCCATGAGGAGCCCAAGACC
TTCGCCGACTTCGTCAAGCCTGAGTACTGGTACCGGTAAGTCTCCCGTGA
CCGCCCCATCGAGCGCTGCGGCGAGTGCGGTAACGTTGTCAAGCTGAACT
ACGTCGGCCCCTTGGAGGACCCCCACGCTCGAACCCTCGAGAACCCCATC
ATCGTCAACGGTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGTTTCCC
CGCCGACTCTCACCAGGTCAACTGGCTGACTAGATCAAGACCGAGGAAGA
CCTCATCCCCCCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATATCGAGC
ACGCCACTGGTCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGGGCATT
GATATCTTCGACATGCGTCCCCTCGATGCCTCCCGCAAGGTCAACAGCAA
GAAGTATGAGGTGAAGCAGGAGGGCAAGATCCTTTCTTTCGATGATGTTC
CTCCAACGCACAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCGGGCTCT
CGCTGCCCGTCCCTTTTCTTCCTCCGTCACCCGCTACGACCACGACCACG
GTCACGGCCACCCTCCCCATGAGGAGCCCAAGACCTTCGCCGACTTCGTC
AAGCCTGAGTACTGGTACCGGTAAGTCTCCCGTGACCGCCCCATCGAGCG
CTGCGGCGAGTGCGGTAACGTTGTCAAGCTGAACTACGTCGGCCCCTTGG
AGGACCCCCACGCTCGAACCCTCGAGAACCCCATCATCGTCAACGGTGCT
GGTGACGAGCAGTACGCTGGTTGCACCGGTTTCCCCGCCGACTCTCACCA
GGTCAACTGGCTGACTAGATCAAGACCGAGGAAGACCTCATCCCCCCGGG
TGCTAAGTCCGGTACCGTTCCCGCCGATATCGAGCACGCCACTGGTCTCG
AGCGTCTCGAACTCGTTGGAAAGATGCAGGGCATTGATATCTTCGACATG
CGTCCCCTCGATGCCTCCCGCAAGGTCAACAGCAAGAAGTATGAGGTGAA
GCAGGAGGGCAAGATCCTTTCTTTCGATGATGTTCCTCCAACGCACAGCC
TTCGCCCTCGCCAGGCGCACCCCTACCCGGGCTCTCGCTGCCCGTCCCTT
TTCTTCCTCCGTCACCCGCTACGACCACGACCACGGTCACGGCCACCCTC
CCCATGAGGAGCCCAAGACCTTCGCCGACTTCGTCAAGCCTGAGTACTGG
TACCGGTAAGTCTCCCGTGACCGCCCCATCGAGCGCTGCGGCGAGTGCGG
TAACGTTGTCAAGCTGAACTACGTCGGCCCCTTGGAGGACCCCCACGCTC
GAACCCTCGAGAACCCCATCATCGTCAACGGTGCTGGTGACGAGCAGTAC
GCTGGTTGCACCGGTTTCCCCGCCGACTCTCACCAGGTCAACTGGCTGAC
TAGATCAAGACCGAGGAAGACCTCATCCCCCCGGGTGCTAAGTCCGGTAC
CGTTCCCGCCGATATCGAGCACGCCACTGGTCTCGAGCGTCTCGAACTCG
TTGGAAAGATGCAGGGCATTGATATCTTCGACATGCGTCCCCTCGATGCC
TCCCGCAAGGTCAACAGCAAGAAGTATGAGGTGAAGCAGGAGGGCAAGAT
CCTTTCTTTCGATGATGTTCCTCCAACGCACAGCCTTCGCCCTCGCCAGG
CGCACCCCTACCCGGGCTCTCGCTGCCCGTCCCTTTTCTTCCTCCGTCAC
CCGCTACGACCACGACCACGGTCACGGCCACCCTCCCCATGAGGAGCCCA
AGACCTTCGCCGACTTCGTCAAGCCTGAGTACTGGTACCGGTAAGTCTCC
CGTGACCGCCCCATCGAGCGCTGCGGCGAGTGCGGTAACGTTGTCAAGCT
GAACTACGTCGGCCCCTTGGAGGACCCCCACGCTCGAACCCTCGAGAACC
CCATCATCGTCAACGGTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGT
TTCCCCGCCGACTCTCACCAGGTCAACTGGCTGACTAGATCAAGACCGAG
GAAGACCTCATCCCCCCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATAT
CGAGCACGCCACTGGTCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGG
GCATTGATATCTTCGACATGCGTCCCCTCGATGCCTCCCGCAAGGTCAAC
AGCAAGAAGTATGAGGTGAAGCAGGAGGGCAAGATCCTTTCTTTCGATGA
TGTTCCTCCAACGCACAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCGG
GCTCTCGCTGCCCGTCCCTTTTCTTCCTCCGTCACCCGCTACGACCACGA
CCACGGTCACGGCCACCCTCCCCATGAGGAGCCCAAGACCTTCGCCGACT
TCGTCAAGCCTGAGTACTGGTACCGGTAAGTCTCCCGTGACCGCCCCATC
GAGCGCTGCGGCGAGTGCGGTAACGTTGTCAAGCTGAACTACGTCGGCCC
CTTGGAGGACCCCCACGCTCGAACCCTCGAGAACCCCATCATCGTCAACG
GTGCTGGTGACGAGCAGTACGCTGGTTGCACCGGTTTCCCCGCCGACTCT
CACCAGGTCAACTGGCTGACTAGATCAAGACCGAGGAAGACCTCATCCCC
CCGGGTGCTAAGTCCGGTACCGTTCCCGCCGATATCGAGCACGCCACTGG
TCTCGAGCGTCTCGAACTCGTTGGAAAGATGCAGGGCATTGATATCTTCG
ACATGCGTCCCCTCGATGCCTCCCGCAAGGTCAACAGCAAGAAGTATGAG
GTGAAGCAGGAGGGCAAGATCCTTTCTTTCGATGATGTTCCTCCAACGCA
CAGCCTTCGCCCTCGCCAGGCGCACCCCTACCCGGGCTCTCGCTGCCCGT
CCCTTTTCTTCCTCCGTCACCCGCTACGACCACGACCACGGTCACGGCCA
CCCTCCCCATGAGGAGCCCAAGACCTTCGCCGACTTCGTCAAGCCTGAGT
ACTGGTACCGGTAAGTCTCCCGTGACCGCCCCATCGAGCGCTGCGGCGAG
TGCGGTAACGTTGTCAAGCTGAACTACGTCGGCCCCTTGGAGGACCCCCA
CGCTCGAACCCTCGAGAACCCCATCATCGTCAACGGTGCTGGTGACGAGC
AGTACGCTGGTTGCACCGGTTTCCCCGCCGACTCTCACCAGGTCAACTGG
CTGACTAGATCAAGACCGAGGAAGACCTCATCCCCCCGGGTGCTAAGTCC
GGTACCGTTCCCGCCGATATCGAGCACGCCACTGGTCTCGAGCGTCTCGA
ACTCGTTGGAAAGATGCAGGGCATTGATATCTTCGACATGCGTCCCCTCG
ATGCCTCCCGCAAGGTCAACAGCAAGAAGTATGAGGTGAAGCAGGAGGGC
AAGATCCTTTCTTTCGATGATGTTCCTCCAACGCACAGCCTTCGCCCTCG
CCAGGCGCACCCCTACCCGGGCTCTCGCTGCCCGTCCCTTTTCTTCCTCC
GTCACCCGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005740mitochondrial envelope
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX4ASPNIDRAFT_199998Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199998-T1ASPNIDRAFT_199998-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199998-T1.cdsASPNIDRAFT_199998-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199998-T1.utr3p1ASPNIDRAFT_199998-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199998-T1.exon6ASPNIDRAFT_199998-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199998-T1.exon5ASPNIDRAFT_199998-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199998-T1.exon4ASPNIDRAFT_199998-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199998-T1.exon3ASPNIDRAFT_199998-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199998-T1.exon2ASPNIDRAFT_199998-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199998-T1.exon1ASPNIDRAFT_199998-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199998-T1.utr5p1ASPNIDRAFT_199998-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265MAN
DBxrefInterPro:IPR002124
DBxrefInterPro:IPR036972
DBxrefPFAM:PF01215
ProductCytochrome c oxidase subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1645807..1647280 -
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