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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:1223599..1225268- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_200112-T1 ID=ASPNIDRAFT_200112-T1|Name=ASPNIDRAFT_200112-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1670bp|location=Sequence derived from alignment at ACJE01000009.1:1223599..1225268- (Aspergillus niger ATCC 1015)
CATCAATCTATCCCGACTAGGGCCACAGCAGCCATGGCTGCCCCCGTCCT
CCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCCCTCGACCCGTTTGACGC
CGGAGCAGCAATATTGGAAGACCTTCAAGAATCCTCTCCTCATCCCCTCG
CCAGCCAATGGCCCCGTCAACCTCATCACGCAACCCTCCGCTCCCTCCTC
TGCCTCCGCCTTCCCTTCCCTCACCCAACCCCCCGATGTGTTCACCGTGA
CCACCGGCGCCCGCGTCCAGATCTACTCCATCCGCACTCGCAAACTCCTC
CGCACAATCACCCGCTTCGATGATACGGTACGAGGCACAGACGTCCGTCC
CGACGGGCGAGTCATCGCCGTTGGTGACGATTCTGGTACGGTGCAGGTGT
TCGACGTGAGCTCCCGTGCCATCTTGAAGACATGGAAGGATCACAAGCAG
CCCGTCTGGGTCACGAAATTCTCCCCCAGCGACCCTACATGCGTCATGAC
CGCCAGTGACGATCGGACGGTACGACTGTGGGATCTTCCCAGCGAGAACA
GCCAGAAGGTCTTCACTGGCCATACCGATTACGTGCGCAGCGGTGCATTC
ATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTGGTCTCTGGTAGTTACGA
CCGGACCGTGCGACTGTGGGATCCTCGCGTTGAGAACCGGTCCGCTATGA
CATTCAAGATGGGCGCAGCGATTGAGACGGTGCTCCCCATGCCCACGGGC
ACGACGGTGCTTGCGGCGGCCGACAACAAGATCGCGGTGCTGGATATCGT
GGCCGGTAAGCCTCTGCACATGATTCAGAGCCACCAAAAGACCGTCACGT
CGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGCTCTCCGGTGCGCTGGAC
GGCCACATGAAGGTATTCGAAACGACCGGCTGGAACATGGTCTCGGGCTC
CAAGTACCCGTCCCCCATTCTCTCCCTTCGCGCGATCACATCGGGCATCG
CCCAGGAGGACAAGCACATTGCCGTCGGTATGCAGTCTGGTCTTCTGTCG
ATCAAGACCCGCCTGTCCGGACAACAGAAGATCCGTGAGCGCGAGCGCCG
CAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCTGGAAGAGCACGACCGGA
AGGCGGCAAAGCAAAAGAAGCAGCGCGGATCCGGATGGGAGAAGCGCCTG
CGCGGACAGGACTTTGTCGGTGAGGGCGTGGACATTGTGATCGAGGGGCG
GGACCTCAAGAAGCGGAAGAAGGAGCAACCGTGGGAACTCGACCTGCGCA
AGGCGAAGTACTCGGCGGCCCTGGATCAGGTGCTGCGCTCGAACGACAAG
ACAGCACAATTGACGCTATTGACGGCGCTGCGGCATCGGTCCGCGCTGCG
GGCGTCCCTGCAGAACCGCGACGAGGTGACGCTGCAGCCCGTGCTGCAAT
GGGTGCACAAGAACATCACGGAGCCGCGACTGGTGCAGCTGAGTGTGGAG
GTGGCGATGAACGTGCTGGATATCTACTCGGGCAACCTGGGCCAGTCGGC
GCAGATCGACAAGATGGTGGAGCGGCTGCACCGGCGAGTGCGCGACGAGG
TGGAGATGGCGCATCAAGCGTACCAGACGAAGGGAATGTTGGAGATGCTT
GCTGCATGAGCAGAAAGCAT back to topCoding sequence (CDS) from alignment at ACJE01000009.1:1223599..1225268- >ASPNIDRAFT_200112-T1 ID=ASPNIDRAFT_200112-T1|Name=ASPNIDRAFT_200112-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1626bp|location=Sequence derived from alignment at ACJE01000009.1:1223599..1225268- (Aspergillus niger ATCC 1015)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAGACCTTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
CGATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCC
GCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGA
GGCACAGACGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGATTC
TGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACAT
GGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCCCCCAGCGAC
CCTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGA
TCTTCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACG
TGCGCAGCGGTGCATTCATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTG
GTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGA
GAACCGGTCCGCTATGACATTCAAGATGGGCGCAGCGATTGAGACGGTGC
TCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATC
GCGGTGCTGGATATCGTGGCCGGTAAGCCTCTGCACATGATTCAGAGCCA
CCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGC
TCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGG
AACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGC
GATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTCGGTATGC
AGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATC
CGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCT
GGAAGAGCACGACCGGAAGGCGGCAAAGCAAAAGAAGCAGCGCGGATCCG
GATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGAC
ATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTG
GGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGATCAGGTGC
TGCGCTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGG
CATCGGTCCGCGCTGCGGGCGTCCCTGCAGAACCGCGACGAGGTGACGCT
GCAGCCCGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGG
TGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGC
AACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGGCTGCACCG
GCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGG
GAATGTTGGAGATGCTTGCTGCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261MMR |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR018983 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF09384 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:1223599..1225268 - |
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