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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:797000..798781+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_200218-T1 ID=ASPNIDRAFT_200218-T1|Name=ASPNIDRAFT_200218-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1782bp|location=Sequence derived from alignment at ACJE01000009.1:797000..798781+ (Aspergillus niger ATCC 1015)
CTTGGCCACTTCTGGATAAGAAAAAAGTGGGTAGTGACCATCCTCCAGTG
GGACGCTGGCCTTTATAACGTCGAATGACCCTCCATTTGGCCTGGAAACG
TTAACGTCAAAAATACATACTTGGGAAACGGCAGGGACACAAAACCTGAA
TTCTTCACCTTTTTGATAAATCCCTTCCACCCCCCAACCCTCCAACCAAC
AGACTTGCATTATTCCAACCGATCAGTATCCCTCCTACGAATCATTGCCA
CTTTTTGCAACCATCATGTCGCGAACTAGAGTTCTGCTGGTCGGAGCTGC
GGGCGAAACGGGCGGCTCTATTGCGAACGGACTGCTCGAGAATCCCGGCT
TTGTAAGAACCCCTCCCTGCTTTCCTGATATCTTTTCTTCTCTTTGAGCC
TGAGTCTAACCTCTGCACCGCTTTCCGTTATTATAGGAGGTTCATGCCCT
CGTCCGTCCCCGTTCGGTTCAGAAGCCTGCCATCGTAGCCCTGCAAGAGC
GAGGCGTACAAATCCGCAAAGGCGATCTCAAGGGCCCCGAGGAGTCCCTC
GCCGACGTCTTGACCGGAATCGATGTCGTTGTCAGCTGTGTCGGGCCTGC
GGAACAGCAGGACCAAATCCCGCTCGCTAAGGCCGCAAAGAGTGCCGGAG
TCCAGCGATTCATCCCATGTGGATTCATTACTGTGGCACCGCCCGGTGGG
ATCATGTGGTTGAGAGACGAGGTAAGTCGTGGCCGCCGCTGCAGCCGCAC
GCCATACCTTCTCTGGTCATCAGCTGACTTCTTCTCCAGAAAGAGACAGT
GTACAACCACATCAAACAGCTCCGACTTCCTTACACCATCATCGACATCG
GTTGGTGGTACCAGCTTTCTTACCCCCGCCTCGGTTCCGGAAGAACCGAC
TATGCCATGACTACAGCGAACAACGAAATCGTCGGTGATGGCAACACTCC
TCTTGCCCTGACGGACCTCAGAGATATTGGACGCTACGTCGCCAAAATCA
TTGTTGATGACCGCACGCTGAACAAGATGGTCTTCGCCTACAACACGGTC
TTGACGCAGAATCAGATCTATGACCTTCTGGAGGAGATCAGCGAGGAGAA
GATCCAGAGGAACTATGTAAGTACAGTGACTCGCTGCGGCTGTTGGATGT
ATGCTGATATCTTCTGTCACAGATCCCTGAAGAGACCATTTACACCAGAG
TGCTTGCAGCTCGGCAGTCTAGTGAGACTTATCCCTTCGACCCTGTCAAA
TTCATACCCCGATACCTGGCCGAAAACCAACTGTCATGGGGTGTCCGTGG
CGACAACAACCCTGAGTACGCCAAGTACCTAGGCTACTTGACCTCCAAGG
ATCTGTATCCCGACTTCGCTCCTCACGACTTCAGGGAATATCTTGAGACG
GTTGTCCGAGGCACGGCTAAGGGTGTCTACACCGACCGGGTAATCTCCAA
GGCTCACCAACGGATGTTCCCTCGGACCGAATCGAGCGATTCGCTTTACA
CCCGGATATTCCCGAGAACGGAATCTAGCGACTCTCTCTACATGTCGAGG
TAATCGGGACATGCATTTTACTTTCAAGCAAAAGGATTTTGAGGCGACGC
TAGACGTGCCTCCTGGGACCCGGCGCGATGTGTATATGACACCATTTGGT
CGAAGCCACGCTATGCGTTGATGGCTTCATTCTCTTCTCTGCCTTATTTC
GCTTTACACGAACGGTTTTATTATTTCCGTTTCTTTCTATTCCCTGGGGG
CTCTAGACTGGCGTTTTTGTATCTATGATGGC back to topCoding sequence (CDS) from alignment at ACJE01000009.1:797000..798781+ >ASPNIDRAFT_200218-T1 ID=ASPNIDRAFT_200218-T1|Name=ASPNIDRAFT_200218-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4320bp|location=Sequence derived from alignment at ACJE01000009.1:797000..798781+ (Aspergillus niger ATCC 1015)
ATGTCGCGAACTAGAGTTCTGCTGGTCGGAGCTGCGGGCGAAACGGGCGG
CTCTATTGCGAACGGACTGCTCGAGAATCCCGGCTTTGAGGTTCATGCCC
TCGTCCGTCCCCGTTCGGTTCAGAAGCCTGCCATCGTAGCCCTGCAAGAG
CGAGGCGTACAAATCCGCAAAGGCGATCTCAAGGGCCCCGAGGAGTCCCT
CGCCGACGTCTTGACCGGAATCGATGTCGTTGTCAGCTGTGTCGGGCCTG
CGGAACAGCAGGACCAAATCCCGCTCGCTAAGGCCGCAAAGAGTGCCGGA
GTCCAGCGATTCATCCCATGTGGATTCATTACTGTGGCACCGCCCGGTGG
GATCATGTGGTTGAGAGACGAGAAAGAGACAGTGTACAACCACATCAAAC
AGCTCCGACTTCCTTACACCATCATCGACATCGGTTGGTGGTACCAGCTT
TCTTACCCCCGCCTCGGTTCCGGAAGAACCGACTATGCCATGACTACAGC
GAACAACGAAATCGTCGGTGATGGCAACACTCCTCTTGCCCTGACGGACC
TCAGAGATATTGGACGCTACGTCGCCAAAATCATTGTTGATGACCGCACG
CTGAACAAGATGGTCTTCGCCTACAACACGGTCTTGACGCAGAATCAGAT
CTATGACCTTCTGGAGGAGATCAGCGAGGAGAAGATCCAGAGGAACTATA
TCCCTGAAGAGACCATTTACACCAGAGTGCTTGCAGCTCGGCAGTCTAGT
GAGACTTATCCCTTCGACCCTGTCAAATTCATACCCCGATACCTGGCCGA
AAACCAACTGTCATGGGGTGTCCGTGGCGACAACAACCCTGAGTACGCCA
AGTACCTAGGCTACTTGACCTCCAAGGATCTGTATCCCGACTTCGCTCCT
CACGACTTCAGGGAATATCTTGAGACGGTTGTCCGAGGCACGGCTAAGGG
TGTCTACACCGACCGGGTAATCTCCAAGGCTCACCAACGGATGTTCCCTC
GGACCGAATCGAGCGATTCGCTTTACACCCGGATATTCCCGAGAACGGAA
TCTAGCGACTCTCTCTACATGTCGAGGTAAATGTCGCGAACTAGAGTTCT
GCTGGTCGGAGCTGCGGGCGAAACGGGCGGCTCTATTGCGAACGGACTGC
TCGAGAATCCCGGCTTTGAGGTTCATGCCCTCGTCCGTCCCCGTTCGGTT
CAGAAGCCTGCCATCGTAGCCCTGCAAGAGCGAGGCGTACAAATCCGCAA
AGGCGATCTCAAGGGCCCCGAGGAGTCCCTCGCCGACGTCTTGACCGGAA
TCGATGTCGTTGTCAGCTGTGTCGGGCCTGCGGAACAGCAGGACCAAATC
CCGCTCGCTAAGGCCGCAAAGAGTGCCGGAGTCCAGCGATTCATCCCATG
TGGATTCATTACTGTGGCACCGCCCGGTGGGATCATGTGGTTGAGAGACG
AGAAAGAGACAGTGTACAACCACATCAAACAGCTCCGACTTCCTTACACC
ATCATCGACATCGGTTGGTGGTACCAGCTTTCTTACCCCCGCCTCGGTTC
CGGAAGAACCGACTATGCCATGACTACAGCGAACAACGAAATCGTCGGTG
ATGGCAACACTCCTCTTGCCCTGACGGACCTCAGAGATATTGGACGCTAC
GTCGCCAAAATCATTGTTGATGACCGCACGCTGAACAAGATGGTCTTCGC
CTACAACACGGTCTTGACGCAGAATCAGATCTATGACCTTCTGGAGGAGA
TCAGCGAGGAGAAGATCCAGAGGAACTATATCCCTGAAGAGACCATTTAC
ACCAGAGTGCTTGCAGCTCGGCAGTCTAGTGAGACTTATCCCTTCGACCC
TGTCAAATTCATACCCCGATACCTGGCCGAAAACCAACTGTCATGGGGTG
TCCGTGGCGACAACAACCCTGAGTACGCCAAGTACCTAGGCTACTTGACC
TCCAAGGATCTGTATCCCGACTTCGCTCCTCACGACTTCAGGGAATATCT
TGAGACGGTTGTCCGAGGCACGGCTAAGGGTGTCTACACCGACCGGGTAA
TCTCCAAGGCTCACCAACGGATGTTCCCTCGGACCGAATCGAGCGATTCG
CTTTACACCCGGATATTCCCGAGAACGGAATCTAGCGACTCTCTCTACAT
GTCGAGGTAAATGTCGCGAACTAGAGTTCTGCTGGTCGGAGCTGCGGGCG
AAACGGGCGGCTCTATTGCGAACGGACTGCTCGAGAATCCCGGCTTTGAG
GTTCATGCCCTCGTCCGTCCCCGTTCGGTTCAGAAGCCTGCCATCGTAGC
CCTGCAAGAGCGAGGCGTACAAATCCGCAAAGGCGATCTCAAGGGCCCCG
AGGAGTCCCTCGCCGACGTCTTGACCGGAATCGATGTCGTTGTCAGCTGT
GTCGGGCCTGCGGAACAGCAGGACCAAATCCCGCTCGCTAAGGCCGCAAA
GAGTGCCGGAGTCCAGCGATTCATCCCATGTGGATTCATTACTGTGGCAC
CGCCCGGTGGGATCATGTGGTTGAGAGACGAGAAAGAGACAGTGTACAAC
CACATCAAACAGCTCCGACTTCCTTACACCATCATCGACATCGGTTGGTG
GTACCAGCTTTCTTACCCCCGCCTCGGTTCCGGAAGAACCGACTATGCCA
TGACTACAGCGAACAACGAAATCGTCGGTGATGGCAACACTCCTCTTGCC
CTGACGGACCTCAGAGATATTGGACGCTACGTCGCCAAAATCATTGTTGA
TGACCGCACGCTGAACAAGATGGTCTTCGCCTACAACACGGTCTTGACGC
AGAATCAGATCTATGACCTTCTGGAGGAGATCAGCGAGGAGAAGATCCAG
AGGAACTATATCCCTGAAGAGACCATTTACACCAGAGTGCTTGCAGCTCG
GCAGTCTAGTGAGACTTATCCCTTCGACCCTGTCAAATTCATACCCCGAT
ACCTGGCCGAAAACCAACTGTCATGGGGTGTCCGTGGCGACAACAACCCT
GAGTACGCCAAGTACCTAGGCTACTTGACCTCCAAGGATCTGTATCCCGA
CTTCGCTCCTCACGACTTCAGGGAATATCTTGAGACGGTTGTCCGAGGCA
CGGCTAAGGGTGTCTACACCGACCGGGTAATCTCCAAGGCTCACCAACGG
ATGTTCCCTCGGACCGAATCGAGCGATTCGCTTTACACCCGGATATTCCC
GAGAACGGAATCTAGCGACTCTCTCTACATGTCGAGGTAAATGTCGCGAA
CTAGAGTTCTGCTGGTCGGAGCTGCGGGCGAAACGGGCGGCTCTATTGCG
AACGGACTGCTCGAGAATCCCGGCTTTGAGGTTCATGCCCTCGTCCGTCC
CCGTTCGGTTCAGAAGCCTGCCATCGTAGCCCTGCAAGAGCGAGGCGTAC
AAATCCGCAAAGGCGATCTCAAGGGCCCCGAGGAGTCCCTCGCCGACGTC
TTGACCGGAATCGATGTCGTTGTCAGCTGTGTCGGGCCTGCGGAACAGCA
GGACCAAATCCCGCTCGCTAAGGCCGCAAAGAGTGCCGGAGTCCAGCGAT
TCATCCCATGTGGATTCATTACTGTGGCACCGCCCGGTGGGATCATGTGG
TTGAGAGACGAGAAAGAGACAGTGTACAACCACATCAAACAGCTCCGACT
TCCTTACACCATCATCGACATCGGTTGGTGGTACCAGCTTTCTTACCCCC
GCCTCGGTTCCGGAAGAACCGACTATGCCATGACTACAGCGAACAACGAA
ATCGTCGGTGATGGCAACACTCCTCTTGCCCTGACGGACCTCAGAGATAT
TGGACGCTACGTCGCCAAAATCATTGTTGATGACCGCACGCTGAACAAGA
TGGTCTTCGCCTACAACACGGTCTTGACGCAGAATCAGATCTATGACCTT
CTGGAGGAGATCAGCGAGGAGAAGATCCAGAGGAACTATATCCCTGAAGA
GACCATTTACACCAGAGTGCTTGCAGCTCGGCAGTCTAGTGAGACTTATC
CCTTCGACCCTGTCAAATTCATACCCCGATACCTGGCCGAAAACCAACTG
TCATGGGGTGTCCGTGGCGACAACAACCCTGAGTACGCCAAGTACCTAGG
CTACTTGACCTCCAAGGATCTGTATCCCGACTTCGCTCCTCACGACTTCA
GGGAATATCTTGAGACGGTTGTCCGAGGCACGGCTAAGGGTGTCTACACC
GACCGGGTAATCTCCAAGGCTCACCAACGGATGTTCCCTCGGACCGAATC
GAGCGATTCGCTTTACACCCGGATATTCCCGAGAACGGAATCTAGCGACT
CTCTCTACATGTCGAGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:797000..798781 + |
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