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ASPNIDRAFT_200329-T1, ASPNIDRAFT_200329-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200329-T1
Unique NameASPNIDRAFT_200329-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:465017..466053-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200329-T1 ID=ASPNIDRAFT_200329-T1|Name=ASPNIDRAFT_200329-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1037bp|location=Sequence derived from alignment at ACJE01000009.1:465017..466053- (Aspergillus niger ATCC 1015)
ATTTCATCGTCACTTTGCATCTCTAAAATCTATCTGTACGTTTGTTTGGT
CCCTGGGTAGTTGCTAAGTCCTCTTGGTCTTGGCATACCTCCAACTTAGA
TGCGCCTACTGATGACGTCCTAGATCACTTGTTCCTCTCAAGTCACACGA
ATCACTTATTCATCATGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAG
CAATCTGCAGAGGAGGTATGTCTTCAGTCACTCCCCCGCCTAGCGTCCAG
TGCTTGTACTATACCACTCTAGATGCAGATCCGCTAACACTATGGACAGG
CGTAAGTCAACACTAAAACAGAACAAACAAACCCTTTCATGCAGCTAACA
ATTGTGTAGCCGGGCCCCCAGCGTTGGCGGAGTGTACCGCGATGAAGCTG
AGAGCACCGCTTCCCTGGTCGACGTCGATTCGCCACATGTCCAAGCCGTG
GATCCCGATTTCCTGAAGCAGAACGTGCAAACCACCACCCAGGCTGAGCG
GATAGAGCGAGAAGAAGAGGAGCGGGAAGCCTACGAAGAACGGAAGGCGA
AGAGCAAGGCTAAGGCTAAAGCCAAGGCGAAGGCTAGTTCGGTCCGCAGC
AACGCGCACAACCCTGTCTACCTCGGAAATGCTGTGCTTCTGGCCTTGAC
TGGCGCTGGTCTGGGGTATGGAGCATACCGGAAGCATGCTGCTGGGCAGC
TTTCGTGGGAGTTGATTGGATGGTGCTCTGGCGCCGTTGGTGCCTTTGGT
GCTGTGGACTACTTTGTTAGCAAGTGAGTATCGGTCTTAGAAGCTCGTGT
GCGGTGATAGTGTTTGCTAATGTGGGGACGTTCTTTAGATGGCTTTTGCA
GAACAAGTACCCTCCGAAATAAGGCCTGAAGTTGAGACCGAGCACTTTGT
GGCAGTCGTGATATCCCAGTGTCAGTTTCGCGGTCTATTATTTCTTTACT
GTTTTTTTGTACTCCTTTAGGGTACATGAGGCGTTTGCGCAGCTTTTGGG
CGTCATAGTGTGTCTGGTACTAGTATATCCCTAATGG
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Coding sequence (CDS) from alignment at ACJE01000009.1:465017..466053-

>ASPNIDRAFT_200329-T1 ID=ASPNIDRAFT_200329-T1|Name=ASPNIDRAFT_200329-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1503bp|location=Sequence derived from alignment at ACJE01000009.1:465017..466053- (Aspergillus niger ATCC 1015)
ATGGCTTTTGCAGAACAAGTACCCTCCGAAATAACCGGGCCCCCAGCGTT
GGCGGAGTGTACCGCGATGAAGCTGAGAGCACCGCTTCCCTGGTCGACGT
CGATTCGCCACATGTCCAAGCCGTGGATCCCGATTTCCTGAAGCAGAACG
TGCAAACCACCACCCAGGCTGAGCGGATAGAGCGAGAAGAAGAGGAGCGG
GAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGGCTAAGGCTAAAGCCAA
GGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCACAACCCTGTCTACCTCG
GAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGGTCTGGGGTATGGAGCA
TACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGGAGTTGATTGGATGGTG
CTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGACTACTTTGTTAGCAAAT
GTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCAGAGGAGG
TATGGCTTTTGCAGAACAAGTACCCTCCGAAATAACCGGGCCCCCAGCGT
TGGCGGAGTGTACCGCGATGAAGCTGAGAGCACCGCTTCCCTGGTCGACG
TCGATTCGCCACATGTCCAAGCCGTGGATCCCGATTTCCTGAAGCAGAAC
GTGCAAACCACCACCCAGGCTGAGCGGATAGAGCGAGAAGAAGAGGAGCG
GGAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGGCTAAGGCTAAAGCCA
AGGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCACAACCCTGTCTACCTC
GGAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGGTCTGGGGTATGGAGC
ATACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGGAGTTGATTGGATGGT
GCTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGACTACTTTGTTAGCAAA
TGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCAGAGGAG
GTATGGCTTTTGCAGAACAAGTACCCTCCGAAATAACCGGGCCCCCAGCG
TTGGCGGAGTGTACCGCGATGAAGCTGAGAGCACCGCTTCCCTGGTCGAC
GTCGATTCGCCACATGTCCAAGCCGTGGATCCCGATTTCCTGAAGCAGAA
CGTGCAAACCACCACCCAGGCTGAGCGGATAGAGCGAGAAGAAGAGGAGC
GGGAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGGCTAAGGCTAAAGCC
AAGGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCACAACCCTGTCTACCT
CGGAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGGTCTGGGGTATGGAG
CATACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGGAGTTGATTGGATGG
TGCTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGACTACTTTGTTAGCAA
ATGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCAGAGGA
GGT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200329ASPNIDRAFT_200329Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200329-T1ASPNIDRAFT_200329-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200329-T1.cdsASPNIDRAFT_200329-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200329-T1.utr3p1ASPNIDRAFT_200329-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200329-T1.exon4ASPNIDRAFT_200329-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200329-T1.exon3ASPNIDRAFT_200329-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200329-T1.exon2ASPNIDRAFT_200329-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200329-T1.exon1ASPNIDRAFT_200329-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200329-T1.utr5p2ASPNIDRAFT_200329-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_200329-T1.utr5p1ASPNIDRAFT_200329-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR039453
DBxrefPFAM:PF17304
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:465017..466053 -
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