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ASPNIDRAFT_200491-T1, ASPNIDRAFT_200491-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200491-T1
Unique NameASPNIDRAFT_200491-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:189984..191035+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200491-T1 ID=ASPNIDRAFT_200491-T1|Name=ASPNIDRAFT_200491-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1052bp|location=Sequence derived from alignment at ACJE01000008.1:189984..191035+ (Aspergillus niger ATCC 1015)
CGGGTCCGAAACCGCAGTTCGAAAAAAGAATCCTGATCAATCAGCGGGAT
CGATTACCAACTAACCACCAATTAACTATCCACTACTCAATTGCCTCCGA
GATTGTCTACTATCCAACATCATCACACTCTCACCAATATAGACACACCA
CACCACACCACCCTCCCTACTCTCAGACAAAAAAAAGCACACCCACCAAA
ATGCCCCTCCCCGCGCGAACCGCCTCAATCACGCGCATAACCAACGAGAC
CAAAATCCAAATCTCCTTGTCCCTAGACGGCGGCATCCTGCCCCCCTACG
AACCATGCGCTCATTTCCCAGCCCCGACGGACCCCGCTGAAGTCGAGGCC
TCCAAGAAGGGCATCATCCCCAACAAAGCCGCCCCGCACGCCACACAATT
CACCCCGACGCAGCAAATCACCATTAACACTGGGATCGGATTCCTGGATC
ATATGTTGCATGCGTTGGCGAAGCATGGAGGGTGGAGTTTGGCTGTGAGG
GCTAAGGGAGATCTTTTCAGTATGACTACCTTTTTCTAGGTTCTATCTTA
TCTAGGGGTTGTGAAGTGGAATTGATATGCTAATGATAATGATGGTTATA
GTCGACGATCACCACACGACAGAAGATACCTTCCTCGCGCTGGGTTCCGC
GTTCACTGAAGCACTGGGTGCACGGCAATCGCTGGCGCGGTTCGGACGGG
GCGATGCACCTCTGGACGAGGCGCTGTCGTGGGCGGTGATTGATCTGTCG
AGTCGGCCGTGGGCGGTGATCAACATTGGGTTCCGGAGGGAGAAGATCGG
GGATTTGAGTACGGAGATGATCACGCATGGATTGCAGAGTTTTGCCCAGG
CGGCGGGAGTGACGCTGCATGTGGGGTGCACCTATGGTGATAATGATCAT
CATCGGGCGGAGAGTGCGTTTAAGGCGTTGGCGGTAGCGATTAGGACGGC
GTGTACGAGGAGAGTGGAGGGAGAGGTTGGGGCGGGGGATGTGGTTAGTA
CGAAGGGGGTTCTCTAAATTATTTTATATAGTATCTTGTTGGTGGAGGCG
TC
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Coding sequence (CDS) from alignment at ACJE01000008.1:189984..191035+

>ASPNIDRAFT_200491-T1 ID=ASPNIDRAFT_200491-T1|Name=ASPNIDRAFT_200491-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2196bp|location=Sequence derived from alignment at ACJE01000008.1:189984..191035+ (Aspergillus niger ATCC 1015)
ATGCCCCTCCCCGCGCGAACCGCCTCAATCACGCGCATAACCAACGAGAC
CAAAATCCAAATCTCCTTGTCCCTAGACGGCGGCATCCTGCCCCCCTACG
AACCATGCGCTCATTTCCCAGCCCCGACGGACCCCGCTGAAGTCGAGGCC
TCCAAGAAGGGCATCATCCCCAACAAAGCCGCCCCGCACGCCACACAATT
CACCCCGACGCAGCAAATCACCATTAACACTGGGATCGGATTCCTGGATC
ATATGTTGCATGCGTTGGCGAAGCATGGAGGGTGGAGTTTGGCTGTGAGG
GCTAAGGGAGATCTTTTCATCGACGATCACCACACGACAGAAGATACCTT
CCTCGCGCTGGGTTCCGCGTTCACTGAAGCACTGGGTGCACGGCAATCGC
TGGCGCGGTTCGGACGGGGCGATGCACCTCTGGACGAGGCGCTGTCGTGG
GCGGTGATTGATCTGTCGAGTCGGCCGTGGGCGGTGATCAACATTGGGTT
CCGGAGGGAGAAGATCGGGGATTTGAGTACGGAGATGATCACGCATGGAT
TGCAGAGTTTTGCCCAGGCGGCGGGAGTGACGCTGCATGTGGGGTGCACC
TATGGTGATAATGATCATCATCGGGCGGAGAGTGCGTTTAAGGCGTTGGC
GGTAGCGATTAGGACGGCGTGTACGAGGAGAGTGGAGGGAGAGGTTGGGG
CGGGGGATGTGTATCTTGTTGGTGGAGGCGTCATGCCCCTCCCCGCGCGA
ACCGCCTCAATCACGCGCATAACCAACGAGACCAAAATCCAAATCTCCTT
GTCCCTAGACGGCGGCATCCTGCCCCCCTACGAACCATGCGCTCATTTCC
CAGCCCCGACGGACCCCGCTGAAGTCGAGGCCTCCAAGAAGGGCATCATC
CCCAACAAAGCCGCCCCGCACGCCACACAATTCACCCCGACGCAGCAAAT
CACCATTAACACTGGGATCGGATTCCTGGATCATATGTTGCATGCGTTGG
CGAAGCATGGAGGGTGGAGTTTGGCTGTGAGGGCTAAGGGAGATCTTTTC
ATCGACGATCACCACACGACAGAAGATACCTTCCTCGCGCTGGGTTCCGC
GTTCACTGAAGCACTGGGTGCACGGCAATCGCTGGCGCGGTTCGGACGGG
GCGATGCACCTCTGGACGAGGCGCTGTCGTGGGCGGTGATTGATCTGTCG
AGTCGGCCGTGGGCGGTGATCAACATTGGGTTCCGGAGGGAGAAGATCGG
GGATTTGAGTACGGAGATGATCACGCATGGATTGCAGAGTTTTGCCCAGG
CGGCGGGAGTGACGCTGCATGTGGGGTGCACCTATGGTGATAATGATCAT
CATCGGGCGGAGAGTGCGTTTAAGGCGTTGGCGGTAGCGATTAGGACGGC
GTGTACGAGGAGAGTGGAGGGAGAGGTTGGGGCGGGGGATGTGTATCTTG
TTGGTGGAGGCGTCATGCCCCTCCCCGCGCGAACCGCCTCAATCACGCGC
ATAACCAACGAGACCAAAATCCAAATCTCCTTGTCCCTAGACGGCGGCAT
CCTGCCCCCCTACGAACCATGCGCTCATTTCCCAGCCCCGACGGACCCCG
CTGAAGTCGAGGCCTCCAAGAAGGGCATCATCCCCAACAAAGCCGCCCCG
CACGCCACACAATTCACCCCGACGCAGCAAATCACCATTAACACTGGGAT
CGGATTCCTGGATCATATGTTGCATGCGTTGGCGAAGCATGGAGGGTGGA
GTTTGGCTGTGAGGGCTAAGGGAGATCTTTTCATCGACGATCACCACACG
ACAGAAGATACCTTCCTCGCGCTGGGTTCCGCGTTCACTGAAGCACTGGG
TGCACGGCAATCGCTGGCGCGGTTCGGACGGGGCGATGCACCTCTGGACG
AGGCGCTGTCGTGGGCGGTGATTGATCTGTCGAGTCGGCCGTGGGCGGTG
ATCAACATTGGGTTCCGGAGGGAGAAGATCGGGGATTTGAGTACGGAGAT
GATCACGCATGGATTGCAGAGTTTTGCCCAGGCGGCGGGAGTGACGCTGC
ATGTGGGGTGCACCTATGGTGATAATGATCATCATCGGGCGGAGAGTGCG
TTTAAGGCGTTGGCGGTAGCGATTAGGACGGCGTGTACGAGGAGAGTGGA
GGGAGAGGTTGGGGCGGGGGATGTGTATCTTGTTGGTGGAGGCGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004424imidazoleglycerol-phosphate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0000105histidine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HIS3_1ASPNIDRAFT_200491Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200491-T1.utr5p1ASPNIDRAFT_200491-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200491-T1.exon1ASPNIDRAFT_200491-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200491-T1.exon2ASPNIDRAFT_200491-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200491-T1.exon3ASPNIDRAFT_200491-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200491-T1.cdsASPNIDRAFT_200491-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200491-T1ASPNIDRAFT_200491-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020565
DBxrefInterPro:IPR000807
DBxrefInterPro:IPR038494
DBxrefPFAM:PF00475
Productimidazoleglycerol-phosphate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:189984..191035 +
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