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ASPNIDRAFT_200569-T1, ASPNIDRAFT_200569-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200569-T1
Unique NameASPNIDRAFT_200569-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:485329..486265+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200569-T1 ID=ASPNIDRAFT_200569-T1|Name=ASPNIDRAFT_200569-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=937bp|location=Sequence derived from alignment at ACJE01000008.1:485329..486265+ (Aspergillus niger ATCC 1015)
CTCCCCTCTCTCCCCCAACCTTCTCCGTTCCACATCTCAAAATGGCCACT
GTATGTGGGGTTCCTGTTTTTGTCATAAAATTGTCTCGGATGGCGAGAGA
TATGTGTCAGCTAACTGCTTGGTGTACAGCGTAGCGCCGCTCTCAAGGTC
GACTGGGCCAAGTTGACCAGCTCCCTCGGACTCCGCGGCCAGACCGCTGC
TTCCCTCCAGGCCTTCAAGAAGCGTAACGACGATGCGCGCCGCAAGGTTC
AGATCCTGTCTGAGCAGGCCCAGACTGTCGACTTCGAGCACTACCGCAAG
GTCCTGAAGAACCAGGCCATCGTCAACGAGATCGAGAACCACTTCAAGAA
CTTCAAGCCCGCCACCTACGATGTCAGCCGCCAGCTGAAGGCCATCGATG
CTTTCGAGGCCCAGGCCGTCAAGGGCGCTGAGGAGACCAAGGGCAAGGTT
GAGTCCGAGCTCCGCAGTCTCCAGAAGACCCTCGAGAACATTGAGACCGC
CCGTCCCTTCGAGGACCTCACTGTTGTATGTTATGGTGTCCCAGGATTGG
ACTACGCAGGATCTTGGTACAGATTTATTAATGTCTCTTTTTCTTTTCCT
TTTAGGATGAGGTTGCCGCCGCTCAGCCCGAGATCGACGAGAAGACCGCC
TCCCTTGTCTCCAAGGGCAGATGGATGCCGGCTGGTTACAAGGTGCGTAA
TACAATACCTGCATTAATGCCTAACTCTGCGACGAGTAAAACTAATGGAT
GTTGGAATTATAGGAGCGCTTCGGCGACATGTCCGTTGTTTAAACGGTTA
CATCTTTTGTACCTATTTTACGTCTCTCCGTCCTTCGACCAGTATAATCA
CACGAAGTTACCCTTTGTTGTCAAGCATGTTGGCCAGTTAGGATACCCTT
GCTCTCTGGCAGTGTGATGTCGGTTGTAGGGTCATGT
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Coding sequence (CDS) from alignment at ACJE01000008.1:485329..486265+

>ASPNIDRAFT_200569-T1 ID=ASPNIDRAFT_200569-T1|Name=ASPNIDRAFT_200569-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2088bp|location=Sequence derived from alignment at ACJE01000008.1:485329..486265+ (Aspergillus niger ATCC 1015)
ATGGCCACTCGTAGCGCCGCTCTCAAGGTCGACTGGGCCAAGTTGACCAG
CTCCCTCGGACTCCGCGGCCAGACCGCTGCTTCCCTCCAGGCCTTCAAGA
AGCGTAACGACGATGCGCGCCGCAAGGTTCAGATCCTGTCTGAGCAGGCC
CAGACTGTCGACTTCGAGCACTACCGCAAGGTCCTGAAGAACCAGGCCAT
CGTCAACGAGATCGAGAACCACTTCAAGAACTTCAAGCCCGCCACCTACG
ATGTCAGCCGCCAGCTGAAGGCCATCGATGCTTTCGAGGCCCAGGCCGTC
AAGGGCGCTGAGGAGACCAAGGGCAAGGTTGAGTCCGAGCTCCGCAGTCT
CCAGAAGACCCTCGAGAACATTGAGACCGCCCGTCCCTTCGAGGACCTCA
CTGTTGATGAGGTTGCCGCCGCTCAGCCCGAGATCGACGAGAAGACCGCC
TCCCTTGTCTCCAAGGGCAGATGGATGCCGGCTGGTTACAAGGAGCGCTT
CGGCGACATGTCCGTTGTTTAAATGGCCACTCGTAGCGCCGCTCTCAAGG
TCGACTGGGCCAAGTTGACCAGCTCCCTCGGACTCCGCGGCCAGACCGCT
GCTTCCCTCCAGGCCTTCAAGAAGCGTAACGACGATGCGCGCCGCAAGGT
TCAGATCCTGTCTGAGCAGGCCCAGACTGTCGACTTCGAGCACTACCGCA
AGGTCCTGAAGAACCAGGCCATCGTCAACGAGATCGAGAACCACTTCAAG
AACTTCAAGCCCGCCACCTACGATGTCAGCCGCCAGCTGAAGGCCATCGA
TGCTTTCGAGGCCCAGGCCGTCAAGGGCGCTGAGGAGACCAAGGGCAAGG
TTGAGTCCGAGCTCCGCAGTCTCCAGAAGACCCTCGAGAACATTGAGACC
GCCCGTCCCTTCGAGGACCTCACTGTTGATGAGGTTGCCGCCGCTCAGCC
CGAGATCGACGAGAAGACCGCCTCCCTTGTCTCCAAGGGCAGATGGATGC
CGGCTGGTTACAAGGAGCGCTTCGGCGACATGTCCGTTGTTTAAATGGCC
ACTCGTAGCGCCGCTCTCAAGGTCGACTGGGCCAAGTTGACCAGCTCCCT
CGGACTCCGCGGCCAGACCGCTGCTTCCCTCCAGGCCTTCAAGAAGCGTA
ACGACGATGCGCGCCGCAAGGTTCAGATCCTGTCTGAGCAGGCCCAGACT
GTCGACTTCGAGCACTACCGCAAGGTCCTGAAGAACCAGGCCATCGTCAA
CGAGATCGAGAACCACTTCAAGAACTTCAAGCCCGCCACCTACGATGTCA
GCCGCCAGCTGAAGGCCATCGATGCTTTCGAGGCCCAGGCCGTCAAGGGC
GCTGAGGAGACCAAGGGCAAGGTTGAGTCCGAGCTCCGCAGTCTCCAGAA
GACCCTCGAGAACATTGAGACCGCCCGTCCCTTCGAGGACCTCACTGTTG
ATGAGGTTGCCGCCGCTCAGCCCGAGATCGACGAGAAGACCGCCTCCCTT
GTCTCCAAGGGCAGATGGATGCCGGCTGGTTACAAGGAGCGCTTCGGCGA
CATGTCCGTTGTTTAAATGGCCACTCGTAGCGCCGCTCTCAAGGTCGACT
GGGCCAAGTTGACCAGCTCCCTCGGACTCCGCGGCCAGACCGCTGCTTCC
CTCCAGGCCTTCAAGAAGCGTAACGACGATGCGCGCCGCAAGGTTCAGAT
CCTGTCTGAGCAGGCCCAGACTGTCGACTTCGAGCACTACCGCAAGGTCC
TGAAGAACCAGGCCATCGTCAACGAGATCGAGAACCACTTCAAGAACTTC
AAGCCCGCCACCTACGATGTCAGCCGCCAGCTGAAGGCCATCGATGCTTT
CGAGGCCCAGGCCGTCAAGGGCGCTGAGGAGACCAAGGGCAAGGTTGAGT
CCGAGCTCCGCAGTCTCCAGAAGACCCTCGAGAACATTGAGACCGCCCGT
CCCTTCGAGGACCTCACTGTTGATGAGGTTGCCGCCGCTCAGCCCGAGAT
CGACGAGAAGACCGCCTCCCTTGTCTCCAAGGGCAGATGGATGCCGGCTG
GTTACAAGGAGCGCTTCGGCGACATGTCCGTTGTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATP7ASPNIDRAFT_200569Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200569-T1ASPNIDRAFT_200569-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200569-T1.utr5p1ASPNIDRAFT_200569-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200569-T1.exon1ASPNIDRAFT_200569-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200569-T1.exon2ASPNIDRAFT_200569-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200569-T1.exon3ASPNIDRAFT_200569-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200569-T1.exon4ASPNIDRAFT_200569-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200569-T1.cdsASPNIDRAFT_200569-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200569-T1.utr3p1ASPNIDRAFT_200569-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036228
DBxrefInterPro:IPR008689
DBxrefPFAM:PF05873
ProductATP synthase d subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:485329..486265 +
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