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ASPNIDRAFT_200605-T1, ASPNIDRAFT_200605-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200605-T1
Unique NameASPNIDRAFT_200605-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:623499..627620+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200605-T1 ID=ASPNIDRAFT_200605-T1|Name=ASPNIDRAFT_200605-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=4122bp|location=Sequence derived from alignment at ACJE01000008.1:623499..627620+ (Aspergillus niger ATCC 1015)
GGATCCCTTCCAGAAAGATAAGTGGGAGAAGTACCGCCGCGAGATTTTAC
AAAATGGTGGCAGCCAGCAAGACCTGTTCCAGATGCTGGAGAGATTTTTG
GGTCGTCCGCCAAATATGAATGCTCTTGTGGAAGGTCTGAAGCGGGCAGA
CAGTCAACACGAATGTTAGAAGAGGCGGCATATTACACCATGGGCTTTTC
AGACAGAATTACTGCAGAAGTCAGAGCCACGCAATGTTACCATGCCACGC
CAATCAGGTCAGCTGCTTGAATTGGGTTCAAAATCCCCAGGAACCCGAGC
GGCCCGAGCCTGCCGAGGGTCACAGACGATGCGGAGGGCCGCTTGGCATC
CAATGTCTCCCTCTTTATAACTCCCATATCATGTCTGCCTTGGCCATATA
AGCCATTCCATAGTGCAATGCCATAGACTGTCTATCGGAAGGTGTCCGGT
AATTCTCCGTGTTTCTTACAGATGCTCGGGAAGTCAATAGACTGCAGGGC
TCTTCATGCGTCATGATATAACCGACGGCACCTCCTTTGGGCTGTGCTTA
GTGGGTCCGGTAGGCTAGACATTCAAGCGCAGCCATTCACAGCTTCAGTC
CAAAGACATGACCGAATAGTAGTATCCTAATAGAGTTCGAGTACCATGAC
CACATGGTGTGAAGAACATGGGTTCCCCTCACGGCGCCGGTTAAAGGCCA
TCCCCTCCTCAAAGAATAAACATCGTACGACGTACACGGGTCGGTTGTTT
CAACTATTATATTTCATTCCAACTATACTTATTGCAAAGCGGAATTGGCT
CCGGTCATCATACAGCCTTTCAGGGGTAATCATATTGCTCGATATCCGGG
GTAATGACATCCAAGTTGTACCTACTAAAACTTACCCATTACTCGAAAGT
AGACACTGCCTCCGGAAAAGCATTCAACAACCCTCAACAAAACTAACTTC
CGCAGGAATGCGGCACCTCCATTCCCTCCACAATTACCGAGGCTTATCCC
AGGAGGAACAGATCCCTGAAGAAACGTGACGAACCGTGATGAGCGGGCAA
TCACAGATTAGTCTCTTCCCCCGCATCCCCGACGGGCAAAACCCCGGTGG
CACTGGCATTAGCCCTAGGCACGGACAAAGCCATTGTCAAGCCTTCAGGA
ACTAAATCAACTAATTCTCCCCATCCCTGCGGGGTACATACTCCACGACG
CCCTGCACGCCCACCGGAATGCCGTCGTCGCTTGACATCATGTGGAACAA
CACATTCCTTCTGCCTCAAAACTGAGCCTTTTAACCGACCGGTTACTTAA
CAATGTATACAGGAGGTCTCAATATTGGAGGAAAATCCCTGACCCCTGAA
GCCACACATGTAACTAGACTTTTGGGATCTTGCATTTCATGCATAGGCAC
TGACTGCAGTAAAGAATATAAATAAGCCTCCCTTCGCACCCTAGTAGCAT
GATTTCTTTCTCCAAGCGGCCTATCTCACTGTCTCCTCTCCTAGCCCAGA
ACTTACTGAGCAGGCAGTAATCCTCCACCATGTTCTCCCGCCGAAACCTC
GTCGCCCTAGGGCTGGCAGCCACCGTCAGCGCCGGCCCCTGTGACATCTA
CGAAGCCGGCGACACGCCCTGCGTAGCCGCGCACAGCACCACCCGCGCCC
TATACAGCTCCTTCAGCGGCGCCCTCTACCAGCTCCAACGTGGCTCCGAC
GACACCACCACCACCATCTCCCCGCTCACAGCCGGCGGCGTCGCCGACGC
CTCCGCCCAAGACACCTTCTGTGCCAACACCACCTGCTTGATCACCATCA
TCTACGACCAATCCGGCAACGGCAACCACCTGACCCAAGCACCCCCGGGA
GGCTTCGACGGCCCCGACGTCGACGGCTACGACAACCTCGCCAGCGCCAT
CGGCGCCCCCGTCACCCTCAATGGCCAAAAGGCCTACGGCGTGTTCATGT
CCCCCGGCACGGGCTACCGTAACAACGAAGCCACCGGCACCGCCACCGGC
GACGAACCCGAAGGCATGTACGCCGTCCTGGACGGCACGCACTACAACGA
CGCCTGCTGCTTCGACTACGGCAACGCCGAGACCAGCAGCACCGACACTG
GCGCCGGCCACATGGAGGCCATCTACCTCGGGAACAGCACCACCTGGGGC
TACGGCGCCGGTGACGGGCCCTGGATCATGGTCGATATGGAGAACAACCT
CTTCTCCGGTGCTGATGAGGGATATAACTCCGGAGATCCCTCGATCAGCT
ACAGCTTTGTCACTGCCGCGGTCAAGGGCGGGGCTGATAAGTGGGCTATT
CGCGGTGGTAATGCTGCCTCTGGGTCCCTCTCTACTTACTACAGCGGCGC
TCGCCCGGATTACTCCGGCTATAACCCCATGAGCAAGGAGGGCGCTATCA
TCCTGGGTATCGGCGGTGACAACAGCAACGGCGCCCAGGGTACCTTCTAC
GAGGGTGTCATGACCTCCGGCTACCCGTCGGACGATGTCGAGAACTCCGT
CCAGGAGAACATCGTGGCTGCGAAATACGTCTCCGGCTCGCTGGTCAGCG
GCCCGTCGTTCACCTCCGGAGAGGTGGTCTCGCTGCGTGTCACTACCCCC
GGTTACACGACGCGGTATATTGCGCACACTGACACCACTGTGAACACGCA
GGTCGTGGACGACGATAGTTCCACCACGCTGAAGGAGGAGGCTAGCTGGA
CCGTGGTGACAGGTCTGGCTAATAGTCAGTGCTTCTCGTTCGAGTCGGTT
GATACCCCTGGTAGCTATATCCGGCATTACAACTTTGAGTTGCTGCTTAA
TGCCAACGATGGCACGAAGCAGTTCCATGAGGATGCTACTTTCTGTCCTC
AGGCGCCGTTGAATGGAGAAGGTACTTCGTTGAGATCGTGGAGTTATCCG
ACGAGGTATTTCAGGCATTATGAGAATGTCCTGTATGCTGCTAGTAATGG
TGGTGTGCAGACGTTTGATTCCAAGACGTCGTTTAATAATGATGTTAGCT
TTGAGATTGAGACGGCGTTTGCTTCGTAAGGGGGGAATTGGGGGTTGTTT
GGTGGTTTGGGTGTGGGGTTGTATCTGCCTGTGTTGGCGGGGAGAGTGGT
TTGTAAATAGGTCATTTTTGGTATATAGCATACGAATACTATACGATAGT
ATACATGATAGTGGTTGTTTCATGTAATCGAGAAATTATTCAAGGCTTGC
AATACAATATCTTATTACTGTATCTCGTGGAGCATTCACAGACTGAACGG
CTGCACAATGATTCTTATGCGGTGATATTGACTGTGATTAGATGATATAT
TCAGGTGTGCTATTTTTCTTGTATTTATGCTTCATGCGAATATATGTATT
TCACGACAGACAGAGAGGTTAAACAAAGCATACTAACGAGCGATTCAGAT
ATGGCATGTATGAATAAGACAAAAGTACTGCGACACTCAAGACCAACACA
AACCAGTATACTTCATAACAATATATGCTAGGCAGTACCTCCGATTCTAC
GATGAGCTTTACCAGAAAATGGATTTCTTTGTCCCTCGTCATTCTCAATT
TTTGGGCCTTCCACGGCTGCGGCAACCTGTTGAGCAAGACGTGTTCTCTC
GTACGGATGGACGTTGATCTTCTTCTCGAGCAGGTCCAATTGCTCTTTCT
CCAAATGGCGGACTCTGACCTCACCGGAGGAATCACTCGGCAAGCATATC
TGGTAAGTCGCTGAAAATTTCTTCTCGAAACTGGCGTAGCTTGGTGGCCA
CTGCGGGAAGCGTCGGAAGTATTTGCCTGTCCAGACGGTCAATATGAATG
AGTCGGATACTTCAATGCCCGCCTGCCTTCTACGGTCGAAGAAATGCTGG
CCGATGCTTCTCACGGAGGCATAGTTTATAACAGGCTTGATGGGGTTTTG
TATGTCGAGGAGACCTAATTCAAAGTGCATAGATAGGCTCCTGAGATTGT
GAAAACCGGTTGCTAGTTTGTCGAAGACGTCGTTGGGCTGTTGTGTGGTT
ATAGTTCAGTTCATGGGATGTACTAAGAGGATTCTTTGGCTTACCCATTG
ATCGTTCTCTCTCTTGACTCCCACCTGCAGTGACTTCAGTTTGGGACAGC
TAACATCGAGGTGGCTGAGCTC
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Coding sequence (CDS) from alignment at ACJE01000008.1:623499..627620+

>ASPNIDRAFT_200605-T1 ID=ASPNIDRAFT_200605-T1|Name=ASPNIDRAFT_200605-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1500bp|location=Sequence derived from alignment at ACJE01000008.1:623499..627620+ (Aspergillus niger ATCC 1015)
ATGTTCTCCCGCCGAAACCTCGTCGCCCTAGGGCTGGCAGCCACCGTCAG
CGCCGGCCCCTGTGACATCTACGAAGCCGGCGACACGCCCTGCGTAGCCG
CGCACAGCACCACCCGCGCCCTATACAGCTCCTTCAGCGGCGCCCTCTAC
CAGCTCCAACGTGGCTCCGACGACACCACCACCACCATCTCCCCGCTCAC
AGCCGGCGGCGTCGCCGACGCCTCCGCCCAAGACACCTTCTGTGCCAACA
CCACCTGCTTGATCACCATCATCTACGACCAATCCGGCAACGGCAACCAC
CTGACCCAAGCACCCCCGGGAGGCTTCGACGGCCCCGACGTCGACGGCTA
CGACAACCTCGCCAGCGCCATCGGCGCCCCCGTCACCCTCAATGGCCAAA
AGGCCTACGGCGTGTTCATGTCCCCCGGCACGGGCTACCGTAACAACGAA
GCCACCGGCACCGCCACCGGCGACGAACCCGAAGGCATGTACGCCGTCCT
GGACGGCACGCACTACAACGACGCCTGCTGCTTCGACTACGGCAACGCCG
AGACCAGCAGCACCGACACTGGCGCCGGCCACATGGAGGCCATCTACCTC
GGGAACAGCACCACCTGGGGCTACGGCGCCGGTGACGGGCCCTGGATCAT
GGTCGATATGGAGAACAACCTCTTCTCCGGTGCTGATGAGGGATATAACT
CCGGAGATCCCTCGATCAGCTACAGCTTTGTCACTGCCGCGGTCAAGGGC
GGGGCTGATAAGTGGGCTATTCGCGGTGGTAATGCTGCCTCTGGGTCCCT
CTCTACTTACTACAGCGGCGCTCGCCCGGATTACTCCGGCTATAACCCCA
TGAGCAAGGAGGGCGCTATCATCCTGGGTATCGGCGGTGACAACAGCAAC
GGCGCCCAGGGTACCTTCTACGAGGGTGTCATGACCTCCGGCTACCCGTC
GGACGATGTCGAGAACTCCGTCCAGGAGAACATCGTGGCTGCGAAATACG
TCTCCGGCTCGCTGGTCAGCGGCCCGTCGTTCACCTCCGGAGAGGTGGTC
TCGCTGCGTGTCACTACCCCCGGTTACACGACGCGGTATATTGCGCACAC
TGACACCACTGTGAACACGCAGGTCGTGGACGACGATAGTTCCACCACGC
TGAAGGAGGAGGCTAGCTGGACCGTGGTGACAGGTCTGGCTAATAGTCAG
TGCTTCTCGTTCGAGTCGGTTGATACCCCTGGTAGCTATATCCGGCATTA
CAACTTTGAGTTGCTGCTTAATGCCAACGATGGCACGAAGCAGTTCCATG
AGGATGCTACTTTCTGTCCTCAGGCGCCGTTGAATGGAGAAGGTACTTCG
TTGAGATCGTGGAGTTATCCGACGAGGTATTTCAGGCATTATGAGAATGT
CCTGTATGCTGCTAGTAATGGTGGTGTGCAGACGTTTGATTCCAAGACGT
CGTTTAATAATGATGTTAGCTTTGAGATTGAGACGGCGTTTGCTTCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046556alpha-L-arabinofuranosidase activity
Vocabulary: Biological Process
TermDefinition
GO:0046373L-arabinose metabolic process
GO:0031221arabinan metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200605ASPNIDRAFT_200605Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200605-T1.utr5p1ASPNIDRAFT_200605-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200605-T1.exon1ASPNIDRAFT_200605-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200605-T1.cdsASPNIDRAFT_200605-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200605-T1.utr3p1ASPNIDRAFT_200605-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200605-T1ASPNIDRAFT_200605-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:CBM42
NoteCAZy:GH54
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR036195
DBxrefInterPro:IPR007934
DBxrefInterPro:IPR015289
DBxrefPFAM:PF09206
DBxrefPFAM:PF05270
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:623499..627620 +
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