You are here

Home

ASPNIDRAFT_200642-T1, ASPNIDRAFT_200642-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_200642-T1
Unique NameASPNIDRAFT_200642-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:772911..774122-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_200642-T1 ID=ASPNIDRAFT_200642-T1|Name=ASPNIDRAFT_200642-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1212bp|location=Sequence derived from alignment at ACJE01000008.1:772911..774122- (Aspergillus niger ATCC 1015)
ATGTCGCTCGAAGCTACCATGATCATGTCCGTTTAGCCACCTTCATCCCA
AGCTCTGTGCGCACCTACTAACGCCATCTACAGTGTCGACAATAGCGAAA
GCAGCAGAAATGGAGATTATACGTAAGTTAACTGTTCTAAATCGCCCAGA
ATCGACCGTCTGGTTCCGCCTCTAACAGCTGCCAGCTCGACACGATGGCA
AGCTCAGATCGACGCCGTGAGCGTCATTCACACCACTAAGATGCGCGTGC
ACCCTCAGTCTGCTGTCGGTCTTATGAGCATGGGCGGAAAAGGTCCCGAG
GTCCTTTCGACATTTACTTCCGACTTTGGTGGTATCCTGGCCGGTCTGCA
TCGCACGAAGATCCATGGCACTGCCCACCTTAGCTCCAGCATACAAGTGG
CCGGTGTATGTTCAAACGACTCCATCATCTCTTCAGATAGATACTGTACG
GGATTGATTGCATTGCTAACCTGATGATTGGCGCAGCTTGCCCTCAAACA
CCGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCCTGCTCTC
CCATCGAAGAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAAGATGAAG
AAGAACAACGTGTCCATCGATGTAATTGCCTTTGGAGATCTGGAATCCGA
TCAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGTGGTGACG
GCTCTAACCTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAGTGAGGAG
CTTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCGATGGTGC
AGGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCGGCTGAGA
ACGACCCCGAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGAGGAGAAG
AACCGGCAAGAAAAGGAAAAGCGGGACCGGGAGGAGCAAGAGCGCAAAGC
CAACCTGGACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAAGACAAGA
AAGAGGATGGTGACAAGATGGACACTGCTTAATGTGGAGACCAGAACAAC
CTCCTGGATGATTTGATGCATACCCGGCGTTTTTAAATGTACTTGCGTTT
TCTTGCTGTAATTGTAGAAAGCGGCTGGTTCCCCAGCAACACGCTTTTGA
AACAGATGCGATCTAATATGCAGATCTATCGCCATCGTAAACTTGTTGTT
TCATGATACAAA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:772911..774122-

>ASPNIDRAFT_200642-T1 ID=ASPNIDRAFT_200642-T1|Name=ASPNIDRAFT_200642-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3324bp|location=Sequence derived from alignment at ACJE01000008.1:772911..774122- (Aspergillus niger ATCC 1015)
CTTGCCCTCAAACACCGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGT
GTTCTCCTGCTCTCCCATCGAAGAAGACGAGAAGACATTAGTGAAGCTGG
CCAAGAAGATGAAGAAGAACAACGTGTCCATCGATGTAATTGCCTTTGGA
GATCTGGAATCCGATCAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGT
CAAGGGTGGTGACGGCTCTAACCTCGCCATCATTCCCCCGGGCCCCAACT
TGCTGAGTGAGGAGCTTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCC
GGTGCCGATGGTGCAGGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGA
GGATGCGGCTGAGAACGACCCCGAACTGGCATTCGCCCTCCGTCTATCTT
TGGAAGAGGAGAAGAACCGGCAAGAAAAGGAAAAGCGGGACCGGGAGGAG
CAAGAGCGCAAAGCCAACCTGGACAACATTCCCGAGGAGGGCTCCAGTGG
GAGCAAAGACAAGAAAGAGGATGGTGACAAGATGGACACTGCTTAACTCG
ACACGATGGCAAGCTCAGATCGACGCCGTGAGCGTCATTCACACCACTAA
GATGCGCGTGCACCCTCAGTCTGCTGTCGGTCTTATGAGCATGGGCGGAA
AAGGTCCCGAGGTCCTTTCGACATTTACTTCCGACTTTGGTGGTATCCTG
GCCGGTCTGCATCGCACGAAGATCCATGGCACTGCCCACCTTAGCTCCAG
CATACAAGTGGCCGGTTGTCGACAATAGCGAAAGCAGCAGAAATGGAGAT
TATACATGTCGCTCGAAGCTACCATGATCATCTTGCCCTCAAACACCGCT
CCGAGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCCTGCTCTCCCATC
GAAGAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAAGATGAAGAAGAA
CAACGTGTCCATCGATGTAATTGCCTTTGGAGATCTGGAATCCGATCAGA
CCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGTGGTGACGGCTCT
AACCTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAGTGAGGAGCTTCA
GGTTACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCGATGGTGCAGGTC
CTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCGGCTGAGAACGAC
CCCGAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGAGGAGAAGAACCG
GCAAGAAAAGGAAAAGCGGGACCGGGAGGAGCAAGAGCGCAAAGCCAACC
TGGACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAAGACAAGAAAGAG
GATGGTGACAAGATGGACACTGCTTAACTCGACACGATGGCAAGCTCAGA
TCGACGCCGTGAGCGTCATTCACACCACTAAGATGCGCGTGCACCCTCAG
TCTGCTGTCGGTCTTATGAGCATGGGCGGAAAAGGTCCCGAGGTCCTTTC
GACATTTACTTCCGACTTTGGTGGTATCCTGGCCGGTCTGCATCGCACGA
AGATCCATGGCACTGCCCACCTTAGCTCCAGCATACAAGTGGCCGGTTGT
CGACAATAGCGAAAGCAGCAGAAATGGAGATTATACATGTCGCTCGAAGC
TACCATGATCATCTTGCCCTCAAACACCGCTCCGAGAAGTCCCAGAGACA
GCGCATCATCGTGTTCTCCTGCTCTCCCATCGAAGAAGACGAGAAGACAT
TAGTGAAGCTGGCCAAGAAGATGAAGAAGAACAACGTGTCCATCGATGTA
ATTGCCTTTGGAGATCTGGAATCCGATCAGACCAAGAAACTAGAGGCCTT
CGTCGAGAACGTCAAGGGTGGTGACGGCTCTAACCTCGCCATCATTCCCC
CGGGCCCCAACTTGCTGAGTGAGGAGCTTCAGGTTACTCCCATTCTGGGC
GGGGACAGCTCCGGTGCCGATGGTGCAGGTCCTGAAGGCGGCGATGGTGC
CTTTGGGTTCGAGGATGCGGCTGAGAACGACCCCGAACTGGCATTCGCCC
TCCGTCTATCTTTGGAAGAGGAGAAGAACCGGCAAGAAAAGGAAAAGCGG
GACCGGGAGGAGCAAGAGCGCAAAGCCAACCTGGACAACATTCCCGAGGA
GGGCTCCAGTGGGAGCAAAGACAAGAAAGAGGATGGTGACAAGATGGACA
CTGCTTAACTCGACACGATGGCAAGCTCAGATCGACGCCGTGAGCGTCAT
TCACACCACTAAGATGCGCGTGCACCCTCAGTCTGCTGTCGGTCTTATGA
GCATGGGCGGAAAAGGTCCCGAGGTCCTTTCGACATTTACTTCCGACTTT
GGTGGTATCCTGGCCGGTCTGCATCGCACGAAGATCCATGGCACTGCCCA
CCTTAGCTCCAGCATACAAGTGGCCGGTTGTCGACAATAGCGAAAGCAGC
AGAAATGGAGATTATACATGTCGCTCGAAGCTACCATGATCATCTTGCCC
TCAAACACCGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCC
TGCTCTCCCATCGAAGAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAA
GATGAAGAAGAACAACGTGTCCATCGATGTAATTGCCTTTGGAGATCTGG
AATCCGATCAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGT
GGTGACGGCTCTAACCTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAG
TGAGGAGCTTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCG
ATGGTGCAGGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCG
GCTGAGAACGACCCCGAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGA
GGAGAAGAACCGGCAAGAAAAGGAAAAGCGGGACCGGGAGGAGCAAGAGC
GCAAAGCCAACCTGGACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAA
GACAAGAAAGAGGATGGTGACAAGATGGACACTGCTTAACTCGACACGAT
GGCAAGCTCAGATCGACGCCGTGAGCGTCATTCACACCACTAAGATGCGC
GTGCACCCTCAGTCTGCTGTCGGTCTTATGAGCATGGGCGGAAAAGGTCC
CGAGGTCCTTTCGACATTTACTTCCGACTTTGGTGGTATCCTGGCCGGTC
TGCATCGCACGAAGATCCATGGCACTGCCCACCTTAGCTCCAGCATACAA
GTGGCCGGTTGTCGACAATAGCGAAAGCAGCAGAAATGGAGATTATACAT
GTCGCTCGAAGCTACCATGATCAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200642ASPNIDRAFT_200642Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200642-T1ASPNIDRAFT_200642-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200642-T1.cdsASPNIDRAFT_200642-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200642-T1.utr3p1ASPNIDRAFT_200642-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_200642-T1.exon4ASPNIDRAFT_200642-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200642-T1.exon3ASPNIDRAFT_200642-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200642-T1.exon2ASPNIDRAFT_200642-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_200642-T1.exon1ASPNIDRAFT_200642-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09264XF3
DBxrefInterPro:IPR003903
DBxrefInterPro:IPR002035
DBxrefInterPro:IPR036465
DBxrefPFAM:PF13519
DBxrefPFAM:PF04056
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:772911..774122 -
Powered by Drupal