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ASPNIDRAFT_201007-T1, ASPNIDRAFT_201007-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_201007-T1
Unique NameASPNIDRAFT_201007-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1322935..1324080+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_201007-T1 ID=ASPNIDRAFT_201007-T1|Name=ASPNIDRAFT_201007-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1146bp|location=Sequence derived from alignment at ACJE01000013.1:1322935..1324080+ (Aspergillus niger ATCC 1015)
TTCCCTCCTGTCTATCCCACTGCCACTGCCTCATCTCTTCGCATCCTCCT
CTTTTTAGATCTCCTAAATAACACATCCGTCAAAATGGCCGGTAAGTTCA
CTCTTGCGCCGCCGCTCTCCTCGATGCGACACCCCATCTACCTCGTCTGG
TGTTTTGCTGCCCCTCCCTGAGGCTCTTAGGCCCCCTCCACGGCGAACAT
ACAACCACCTTCACATACAATCATGACAGTGAAAGCTAACGCAATGCCTT
AAACATCTAGACTTCCAGAGCATCGCACGTACGTATTGTTACCTCCATTC
TGGCCCCCGTCCCCCGTCGACCAGGGGATGACCTGCATGCATCGTCGCAT
CAGGCAGACCCCTCCGATTCCATCTGCGTCGCAGATACCCGAGTCTACCC
AATAGACTGCCCATAACATGGCCTAACATATGTCGCTACGAACAGAGCAA
TTTGTGCAATTCTACTACCAGACCTTTGACGCGGACCGTCAGCAGCTGGC
CGGTCTCTACGTATGTTGAATCACCCCGCATTCCACCATTTGCAGGCCCG
AGGAACTAACCTATATACCCCCAAATCGATAGCGCGATAACTCTATGCTC
ACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAAGCT
GACGGTTAGTATTATCATCAGCCTTCACTGAGACCCATTATCGGCTTACT
GACCTATGCAACGTAATCATACAGAGTCTTCCTTTCCAGAAGGTCCAGCA
CCAGATCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCATCG
TCATGGTTACCGGTGCCCTTATCGTACGTGCCCTGCTTTTGTTGGCGGAA
GATGCCTTCAATTCCTTCGCGCAAAATGAACCGAGGTTGGCTTGCTGTTC
GTTTGGCTTACTTTTCGCTTTTCTTTTCTTCTTATAGGTCGACGAGGAGC
CCCGCCCCATGAACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGGC
AGCTACTACGTCTTCAACGACATCTTCCGTCTCATCATGGGTTAAATTGC
GACGCAGGGGATTGGCGGGGATTTGATGTGACGTGTGTGATGGGTGATTT
AGGAGGCCCATGGCTTGGCCTATTCGGTAGGCAGCTCTTATGAGAT
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Coding sequence (CDS) from alignment at ACJE01000013.1:1322935..1324080+

>ASPNIDRAFT_201007-T1 ID=ASPNIDRAFT_201007-T1|Name=ASPNIDRAFT_201007-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2214bp|location=Sequence derived from alignment at ACJE01000013.1:1322935..1324080+ (Aspergillus niger ATCC 1015)
ATGGCCGACTTCCAGAGCATCGCACAGCAATTTGTGCAATTCTACTACCA
GACCTTTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACCGCGATAACT
CTATGCTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATG
GAGAAGCTGACGAGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCAC
TCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCG
GTGCCCTTATCGTCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACC
TTCACTCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTT
CCGTCTCATCATGGGTTAAATGGCCGACTTCCAGAGCATCGCACAGCAAT
TTGTGCAATTCTACTACCAGACCTTTGACGCGGACCGTCAGCAGCTGGCC
GGTCTCTACCGCGATAACTCTATGCTCACCTTCGAGACTGCCTCCCAGAT
GGGTGTTGCCCCCATCATGGAGAAGCTGACGAGTCTTCCTTTCCAGAAGG
TCCAGCACCAGATCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGCAGC
ATCATCGTCATGGTTACCGGTGCCCTTATCGTCGACGAGGAGCCCCGCCC
CATGAACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGGCAGCTACT
ACGTCTTCAACGACATCTTCCGTCTCATCATGGGTTAAATGGCCGACTTC
CAGAGCATCGCACAGCAATTTGTGCAATTCTACTACCAGACCTTTGACGC
GGACCGTCAGCAGCTGGCCGGTCTCTACCGCGATAACTCTATGCTCACCT
TCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAAGCTGACG
AGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCACTCTCGATGCTCA
GCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCGGTGCCCTTATCG
TCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCACTCTCAAC
CCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGTCTCATCAT
GGGTTAAATGGCCGACTTCCAGAGCATCGCACAGCAATTTGTGCAATTCT
ACTACCAGACCTTTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACCGC
GATAACTCTATGCTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCC
CATCATGGAGAAGCTGACGAGTCTTCCTTTCCAGAAGGTCCAGCACCAGA
TCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATG
GTTACCGGTGCCCTTATCGTCGACGAGGAGCCCCGCCCCATGAACTACAC
CCAGACCTTCACTCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAACG
ACATCTTCCGTCTCATCATGGGTTAAATGGCCGACTTCCAGAGCATCGCA
CAGCAATTTGTGCAATTCTACTACCAGACCTTTGACGCGGACCGTCAGCA
GCTGGCCGGTCTCTACCGCGATAACTCTATGCTCACCTTCGAGACTGCCT
CCCAGATGGGTGTTGCCCCCATCATGGAGAAGCTGACGAGTCTTCCTTTC
CAGAAGGTCCAGCACCAGATCTCCACTCTCGATGCTCAGCCCTCTGTTAA
CGGCAGCATCATCGTCATGGTTACCGGTGCCCTTATCGTCGACGAGGAGC
CCCGCCCCATGAACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGGC
AGCTACTACGTCTTCAACGACATCTTCCGTCTCATCATGGGTTAAATGGC
CGACTTCCAGAGCATCGCACAGCAATTTGTGCAATTCTACTACCAGACCT
TTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACCGCGATAACTCTATG
CTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAA
GCTGACGAGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCACTCTCG
ATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCGGTGCC
CTTATCGTCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCAC
TCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGTC
TCATCATGGGTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NTF2ASPNIDRAFT_201007Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201007-T1ASPNIDRAFT_201007-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201007-T1.utr5p1ASPNIDRAFT_201007-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201007-T1.exon1ASPNIDRAFT_201007-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201007-T1.exon2ASPNIDRAFT_201007-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201007-T1.exon3ASPNIDRAFT_201007-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201007-T1.exon4ASPNIDRAFT_201007-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201007-T1.exon5ASPNIDRAFT_201007-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201007-T1.exon6ASPNIDRAFT_201007-T1.exon6Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201007-T1.cdsASPNIDRAFT_201007-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201007-T1.utr3p1ASPNIDRAFT_201007-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265BCT
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR018222
DBxrefInterPro:IPR002075
DBxrefPFAM:PF02136
ProductNuclear transport factor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1322935..1324080 +
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