You are here

Home

ASPNIDRAFT_201783-T1, ASPNIDRAFT_201783-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_201783-T1
Unique NameASPNIDRAFT_201783-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1588046..1589710+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_201783-T1 ID=ASPNIDRAFT_201783-T1|Name=ASPNIDRAFT_201783-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1665bp|location=Sequence derived from alignment at ACJE01000002.1:1588046..1589710+ (Aspergillus niger ATCC 1015)
TTCAACGCTATTCTCCGGGATGGCCAACCAGACCAGGTGATGGATGCGAT
GCTTGATCCTCGCTTTGAGAACTTAGTTTGCTTGATGCCACAAAGCACCT
TTGTTGAAGTCTTTCATCTCCTCTCTCCGGCTTACTTTATTGATCCTTAT
CGGGAAATCCATCGTCCCCTTCATCCGTCGGCTGTCGATGTCAAGCAGTA
CAAATCATTGGAATCGATTTTTGACGAGTTTGCCAATAACCTGTCTGCCA
TCCTGCAGATCAGGTGGGCGGGCGGCCAGCCCTTGGGCTTGGCTGAGTAC
ACGCACCTGCTTGATTGCGCACGCTCAATGGGCGACGCTATCATGGCAGA
CTATATCTGGCATACAATTAGGGAGGATGGAATGGTGCCGGATTCCCAGT
GCTATAACTACTACATGGAAGCGAAAGTCTGGGATAAAGCATACACCGGC
TTGGAGAAGTATCGCCTCAGAATGACCCCTTACCTGTATCGGAAGAGGAG
ATTCTTCGAACCCAACCCCGGATGGCAAGGTTACGGTACTGCCGCCCGGA
GTGTGAGAAAGGAAGTGCTGCAGATCTTTAACGAGATGACACAGGAGGGA
ACCTCGGGGGACACGACTACCTTTGTCAATGTGATCCTTGCGTCAAGCCG
AGTTGGCCATATGCAAGGAATCAAGAATGTCCTGCACACCGTCTGGAACA
TTGACGTTGATGCGCTGCTAGAACAGGTCGATGAGTCGATGCTCCCGGAG
GTGACCCCATACGACCGTTCCTCACCGCTGTACCCCACAAGCCATCTGCT
GTTCGCCGTGGCGCATGCCTTCGGCACCAACAATGACATCCCTGCCGCTC
TGCGCACCATAGATTTTATTTCGAGCAGATACGACATCCCGGTGCCGGAG
AATGTCTGGCTCGAGCTATTTGAGCGATCGTTCGTTTTGTCTCGTCCGAG
GTTTGGCCCTGACGCTGAAAGGAACGCAAAGGGCCAGGTTTCATATGACT
TCCTCAACTCCATGTTCGAAACGATGACAGCCGAGCCTTTCAACGTGCGT
CCAACAATCGAGGTGCACCATATTCTCGCCAAGACTGCGTGGGATCGCGC
CAGGCTGTCAGAATTCAAGCACCATATGGAAGCTGCGTATGACCTTTTAA
GGGAGACAAGAAAGAAGAGGAGAACTGCAAGGTCGATCATAGAAGCATAT
CTGGGGCAGCCACAAACGCAGATTCTGAGATCGCGAGCCTTTGCAGATGC
TGTGCACGCGTATGACATTCTGCGCCTGCGCACTATGCAGCAAACCGTTA
TCATGGAGCGTCTTGCAAGGCTTTTACTAATTCACCGCCGCTGGGTGGGT
AGTCAGAACCAAGTGTGGGAACGAAGCCTTCTACCGCAGGCGCTGGAAGA
ATGGCGAGACTTTTTGCCAGAGTCCGTGGTATACCATACCCGAGGAGGCC
TCGTCGAATTTGAAGGTGCCACCTCTTGGCGCCAGCGTAATATAAGAACC
CATGATAGAGTACCAGTCCGGCGGCCAGCGTTGGGAACAAATATCGAGCT
TGACGACGACGCGAACGATATTGATGACGACTTTTTCTGGGATTATTATC
GACAATCTGCCCCACACCTTGATCTGTCCATTCCGCCTCTGAGAAGGCTT
TTCGAGGCTGTCCAA
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:1588046..1589710+

>ASPNIDRAFT_201783-T1 ID=ASPNIDRAFT_201783-T1|Name=ASPNIDRAFT_201783-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1624bp|location=Sequence derived from alignment at ACJE01000002.1:1588046..1589710+ (Aspergillus niger ATCC 1015)
ATGGATGCGATGCTTGATCCTCGCTTTGAGAACTTAGTTTGCTTGATGCC
ACAAAGCACCTTTGTTGAAGTCTTTCATCTCCTCTCTCCGGCTTACTTTA
TTGATCCTTATCGGGAAATCCATCGTCCCCTTCATCCGTCGGCTGTCGAT
GTCAAGCAGTACAAATCATTGGAATCGATTTTTGACGAGTTTGCCAATAA
CCTGTCTGCCATCCTGCAGATCAGGTGGGCGGGCGGCCAGCCCTTGGGCT
TGGCTGAGTACACGCACCTGCTTGATTGCGCACGCTCAATGGGCGACGCT
ATCATGGCAGACTATATCTGGCATACAATTAGGGAGGATGGAATGGTGCC
GGATTCCCAGTGCTATAACTACTACATGGAAGCGAAAGTCTGGGATAAAG
CATACACCGGCTTGGAGAAGTATCGCCTCAGAATGACCCCTTACCTGTAT
CGGAAGAGGAGATTCTTCGAACCCAACCCCGGATGGCAAGGTTACGGTAC
TGCCGCCCGGAGTGTGAGAAAGGAAGTGCTGCAGATCTTTAACGAGATGA
CACAGGAGGGAACCTCGGGGGACACGACTACCTTTGTCAATGTGATCCTT
GCGTCAAGCCGAGTTGGCCATATGCAAGGAATCAAGAATGTCCTGCACAC
CGTCTGGAACATTGACGTTGATGCGCTGCTAGAACAGGTCGATGAGTCGA
TGCTCCCGGAGGTGACCCCATACGACCGTTCCTCACCGCTGTACCCCACA
AGCCATCTGCTGTTCGCCGTGGCGCATGCCTTCGGCACCAACAATGACAT
CCCTGCCGCTCTGCGCACCATAGATTTTATTTCGAGCAGATACGACATCC
CGGTGCCGGAGAATGTCTGGCTCGAGCTATTTGAGCGATCGTTCGTTTTG
TCTCGTCCGAGGTTTGGCCCTGACGCTGAAAGGAACGCAAAGGGCCAGGT
TTCATATGACTTCCTCAACTCCATGTTCGAAACGATGACAGCCGAGCCTT
TCAACGTGCGTCCAACAATCGAGGTGCACCATATTCTCGCCAAGACTGCG
TGGGATCGCGCCAGGCTGTCAGAATTCAAGCACCATATGGAAGCTGCGTA
TGACCTTTTAAGGGAGACAAGAAAGAAGAGGAGAACTGCAAGGTCGATCA
TAGAAGCATATCTGGGGCAGCCACAAACGCAGATTCTGAGATCGCGAGCC
TTTGCAGATGCTGTGCACGCGTATGACATTCTGCGCCTGCGCACTATGCA
GCAAACCGTTATCATGGAGCGTCTTGCAAGGCTTTTACTAATTCACCGCC
GCTGGGTGGGTAGTCAGAACCAAGTGTGGGAACGAAGCCTTCTACCGCAG
GCGCTGGAAGAATGGCGAGACTTTTTGCCAGAGTCCGTGGTATACCATAC
CCGAGGAGGCCTCGTCGAATTTGAAGGTGCCACCTCTTGGCGCCAGCGTA
ATATAAGAACCCATGATAGAGTACCAGTCCGGCGGCCAGCGTTGGGAACA
AATATCGAGCTTGACGACGACGCGAACGATATTGATGACGACTTTTTCTG
GGATTATTATCGACAATCTGCCCCACACCTTGATCTGTCCATTCCGCCTC
TGAGAAGGCTTTTCGAGGCTGTCC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201783ASPNIDRAFT_201783Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201783-T1.utr5p1ASPNIDRAFT_201783-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201783-T1.exon1ASPNIDRAFT_201783-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201783-T1.cdsASPNIDRAFT_201783-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201783-T1.utr3p1ASPNIDRAFT_201783-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201783-T1ASPNIDRAFT_201783-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR024319
DBxrefPFAM:PF12921
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1588046..1589710 +
Powered by Drupal