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ASPNIDRAFT_201896-T1, ASPNIDRAFT_201896-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_201896-T1
Unique NameASPNIDRAFT_201896-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1372085..1373869-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_201896-T1 ID=ASPNIDRAFT_201896-T1|Name=ASPNIDRAFT_201896-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1785bp|location=Sequence derived from alignment at ACJE01000006.1:1372085..1373869- (Aspergillus niger ATCC 1015)
CTTAGAGGAGGCATCAATCGCATCCAAGAAGGACCCTTGAAACAAGTCAC
AATGGCTTCTATACCTGGTAAGTATCTTTAGGGCCGTATGCTCCATTCCA
CTCTATCTTGTTTCTTCTCCGCTGATCCCATGACGCAGTTGTTGTAAAGC
ACCAGGGCAAACGCTACGAGGTGGAGCTCGATCCTTCCCTGAATGGCGAA
ACGCTCAAATACCAGCTATTTTCTCTCACTGGCGTCGAACCCGAGCGGCA
GAAGATCCTAGTCAAGGGAGGCCAGCTTAAAGATGATACACCTCTGTCCT
CCCTCAACGCCAAACCCGGCCAAACGTTCATGATGATGGGCACTCCGTCG
GGCGGTCAAGGTGCTGGAGACTTGGGTAGACCAAAGGAAGTCGTCAAGTT
TTTGGAAGACATGACGGAAGCTGAAGCTGCCAGGGCGGAGGGTGCAACTC
CTGCAGGTCTGCAGAACCTTGGAAATACTTGCTACCTGAACTCAACGCTA
CAGACACTACGGAGCGTTCCCGAACTCCAGGATGCGCTGCTCAAATACCG
ACCTTCTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGAACCTCAGTAGTC
TCGGTCTTGGCGGCTTGGGAGCTTCTATGGATCTCACGTCCTCTCTGCGG
GACCTCTTCAAGCAAATGTCGGAGACGCAGGAAGGTTTCCCGCCGCTTAT
GTTTCTCAACGCGCTTCGAAATGCTTTCCCCCAATTTGCTCAAAGGGATC
GCAATGGACATGGCTATGCTCAACAGGATGCCGAAGAGGCCTGGTCACAG
ATCGTGAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGAGGGTGAAGGTGA
CTCTGCCGCCGAAGTTTCCTTCGTGGATAAGTACATGGCCGGAGGGTTTG
AGTCCACCACCGAATGCGACGAAAAGGCCGCAAAGGAGGCTGGTGAAGAA
CCTACTAATAGCTCCGATGTGTTTTACAAGCTTGATTGTCATATTGGTAA
AGAGACTAACCATTTGCACGACGGTATTATGGCTGGTCTCGAGGAGAAGA
TCGAAAAGCGGTCCTCTACTCTTGACCGCGATGCCGTATATACCAAACGT
TCACGCATTGCGCGCTTGCCCAAGTACTTGACGGTGCATTTCGTTCGGTT
CTTCTGGAAGCGCGAAACACAGAAGAAGGCCAAGATTATGCGAAAGGTCA
CATTCCCCGCTGAGCTTGATGCGGTGGACTTCTGCACCGACGAATTGAAA
AAGCAGCTCATTCCTGTGAGAGACAAGGTCCGTGAGATTCGGAAGGAAGA
GGTGGATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCGCTCACCGGAAAG
AGGAGGAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGCATGGAGCCGATG
CAGAAGAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTCTAAAGCCGCGGA
GAAAGACGGAGATGAGGCCATGACCGATGTGTTCAAGTCCGATGCAGACT
ACGAAGCTGAGAAGACCGCCTCGATTCTCGCGGCTAAGAAAGAATTGTCT
GAGCTCATTGACCCCAGTCTTGCCTCAGACAGCGGTGTGAACAAGACGGG
TCTCTACGAACTACGCGGAGTGATCACACATCAGGGTGCAAGTGCAGACA
GCGGACATTACACCGCGTACGTGAAAAAGCAGTCCAGCAGTGATGGTGCA
AGCACCGAAGACAAGTGGTGGTGGTTCAACGATGAGAAGGTTACCGAAGT
GGAAGGGGACAAGATTGAGACGCTTGCTGGTGGTG
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Coding sequence (CDS) from alignment at ACJE01000006.1:1372085..1373869-

>ASPNIDRAFT_201896-T1 ID=ASPNIDRAFT_201896-T1|Name=ASPNIDRAFT_201896-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3326bp|location=Sequence derived from alignment at ACJE01000006.1:1372085..1373869- (Aspergillus niger ATCC 1015)
TTGTTGTAAAGCACCAGGGCAAACGCTACGAGGTGGAGCTCGATCCTTCC
CTGAATGGCGAAACGCTCAAATACCAGCTATTTTCTCTCACTGGCGTCGA
ACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGCCAGCTTAAAGATGATA
CACCTCTGTCCTCCCTCAACGCCAAACCCGGCCAAACGTTCATGATGATG
GGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACTTGGGTAGACCAAAGGA
AGTCGTCAAGTTTTTGGAAGACATGACGGAAGCTGAAGCTGCCAGGGCGG
AGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGGAAATACTTGCTACCTG
AACTCAACGCTACAGACACTACGGAGCGTTCCCGAACTCCAGGATGCGCT
GCTCAAATACCGACCTTCTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGA
ACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGCTTCTATGGATCTCACG
TCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGGAGACGCAGGAAGGTTT
CCCGCCGCTTATGTTTCTCAACGCGCTTCGAAATGCTTTCCCCCAATTTG
CTCAAAGGGATCGCAATGGACATGGCTATGCTCAACAGGATGCCGAAGAG
GCCTGGTCACAGATCGTGAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGA
GGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTCGTGGATAAGTACATGG
CCGGAGGGTTTGAGTCCACCACCGAATGCGACGAAAAGGCCGCAAAGGAG
GCTGGTGAAGAACCTACTAATAGCTCCGATGTGTTTTACAAGCTTGATTG
TCATATTGGTAAAGAGACTAACCATTTGCACGACGGTATTATGGCTGGTC
TCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCTTGACCGCGATGCCGTA
TATACCAAACGTTCACGCATTGCGCGCTTGCCCAAGTACTTGACGGTGCA
TTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAGAAGAAGGCCAAGATTA
TGCGAAAGGTCACATTCCCCGCTGAGCTTGATGCGGTGGACTTCTGCACC
GACGAATTGAAAAAGCAGCTCATTCCTGTGAGAGACAAGGTCCGTGAGAT
TCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCG
CTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGC
ATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTC
TAAAGCCGCGGAGAAAGACGGAGATGAGGCCATGACCGATGTGTTCAAGT
CCGATGCAGACTACGAAGCTGAGAAGACCGCCTCGATTCTCGCGGCTAAG
AAAGAATTGTCTGAGCTCATTGACCCCAGTCTTGCCTCAGACAGCGGTGT
GAACAAGACGGGTCTCTACGAACTACGCGGAGTGATCACACATCAGGGTG
CAAGTGCAGACAGCGGACATTACACCGCGTACGTGAAAAAGCAGTCCAGC
AGTGATGGTGCAAGCACCGAAGACAAGTGGTGGTGGTTCAACGATGAGAA
GGTTACCGAAGTGGAAGGGGACAAGATTGAGACGCTTGCTGGTGGTGATG
GCTTCTATACCTGTTGTTGTAAAGCACCAGGGCAAACGCTACGAGGTGGA
GCTCGATCCTTCCCTGAATGGCGAAACGCTCAAATACCAGCTATTTTCTC
TCACTGGCGTCGAACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGCCAG
CTTAAAGATGATACACCTCTGTCCTCCCTCAACGCCAAACCCGGCCAAAC
GTTCATGATGATGGGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACTTGG
GTAGACCAAAGGAAGTCGTCAAGTTTTTGGAAGACATGACGGAAGCTGAA
GCTGCCAGGGCGGAGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGGAAA
TACTTGCTACCTGAACTCAACGCTACAGACACTACGGAGCGTTCCCGAAC
TCCAGGATGCGCTGCTCAAATACCGACCTTCTGGGGGCTCTTCTGGAGGT
TCTAGCCTTTCGAACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGCTTC
TATGGATCTCACGTCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGGAGA
CGCAGGAAGGTTTCCCGCCGCTTATGTTTCTCAACGCGCTTCGAAATGCT
TTCCCCCAATTTGCTCAAAGGGATCGCAATGGACATGGCTATGCTCAACA
GGATGCCGAAGAGGCCTGGTCACAGATCGTGAGTCAGCTGCGTAACAAGC
TGGTCGTGAAGGAGGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTCGTG
GATAAGTACATGGCCGGAGGGTTTGAGTCCACCACCGAATGCGACGAAAA
GGCCGCAAAGGAGGCTGGTGAAGAACCTACTAATAGCTCCGATGTGTTTT
ACAAGCTTGATTGTCATATTGGTAAAGAGACTAACCATTTGCACGACGGT
ATTATGGCTGGTCTCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCTTGA
CCGCGATGCCGTATATACCAAACGTTCACGCATTGCGCGCTTGCCCAAGT
ACTTGACGGTGCATTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAGAAG
AAGGCCAAGATTATGCGAAAGGTCACATTCCCCGCTGAGCTTGATGCGGT
GGACTTCTGCACCGACGAATTGAAAAAGCAGCTCATTCCTGTGAGAGACA
AGGTCCGTGAGATTCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGTAAG
CGTCAAAAGCTCGCTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGCCGA
GTCCGGGGCAAGCATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAGAGC
GCAAGGGAGAGTCTAAAGCCGCGGAGAAAGACGGAGATGAGGCCATGACC
GATGTGTTCAAGTCCGATGCAGACTACGAAGCTGAGAAGACCGCCTCGAT
TCTCGCGGCTAAGAAAGAATTGTCTGAGCTCATTGACCCCAGTCTTGCCT
CAGACAGCGGTGTGAACAAGACGGGTCTCTACGAACTACGCGGAGTGATC
ACACATCAGGGTGCAAGTGCAGACAGCGGACATTACACCGCGTACGTGAA
AAAGCAGTCCAGCAGTGATGGTGCAAGCACCGAAGACAAGTGGTGGTGGT
TCAACGATGAGAAGGTTACCGAAGTGGAAGGGGACAAGATTGAGACGCTT
GCTGGTGGTGATGGCTTCTATACCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201896ASPNIDRAFT_201896Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201896-T1ASPNIDRAFT_201896-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201896-T1.cdsASPNIDRAFT_201896-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201896-T1.exon2ASPNIDRAFT_201896-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201896-T1.exon1ASPNIDRAFT_201896-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201896-T1.utr5p1ASPNIDRAFT_201896-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263BGW
NoteMEROPS:MER0004316
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR018200
DBxrefInterPro:IPR001394
DBxrefInterPro:IPR000626
DBxrefPFAM:PF13423
DBxrefPFAM:PF00443
DBxrefPFAM:PF00240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1372085..1373869 -
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