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ASPNIDRAFT_201930-T1, ASPNIDRAFT_201930-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_201930-T1
Unique NameASPNIDRAFT_201930-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1265869..1267038+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_201930-T1 ID=ASPNIDRAFT_201930-T1|Name=ASPNIDRAFT_201930-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1170bp|location=Sequence derived from alignment at ACJE01000006.1:1265869..1267038+ (Aspergillus niger ATCC 1015)
AACCACCCAACGCCAACCGACAACATCTCGTCTCGACCGGCTGCGCATCT
CAGACGTTCAAGATGCGTACCTACGACGATTCTTTCAGCGGTCAGAAGAT
CTACCCTGGAAAGGTGCGTTTTTATGTCCCTTTTCCGCCAGCCAAACAGC
AAACGAACGGCCTCGAAATTCGCCACGAAAACCTACCTCTACACCAGACC
CTTCACCAATGCATGCAAAAGAAGGATATATCAGTTGACGGTTTCTTTTG
AAAAATTATAGGGTAAGCTGTACGTCCGTGGCGACAGCAAGATCTTCCGC
TTCCAGAATGGAAAGTCCGAGTCCCTCTTCCTCCAGCGCAAGAACCCCCG
CCGCATCGCCTGGACTGTCCTCTACCGTCGCCAGCACAAGAAGGGCATCT
CTGAAGTCAGTACCCGCCATTTATCCCTTTGGATTGTTGAGTTTGTTGTT
TCGTTGTTTTGTTGCACGGGTTGGAAGAGGAGGGAGTACTGGGTTGTTCT
ACCATCGAATTACGACGCGAACATACATGAAGAATTCGTGATTGGATATG
ACGGTTGAATGCTTCGATGATATACTGGGTGGATTAAATTACAACCCAGT
GGTGGCAGTGAAGACTATGGCAACAACATTGAAGGAAGACAGGGGGGATA
CAAGTTTCCATGAAAGGAGACCGCATGCTGACCGGGACCCTTTTTCAAAT
TTACAGGAAGTTGCCAAGAAGCGCACCCGCCGTGTCGTGAAGAGCCAGCG
TGCCATCGTTGGTGCCTCCCTCGACGTGATCAAGGAGCGCCGCGCTCAGC
GCCCCGAGGCCCGTGCCGCCGCCCGCCAGCAGGCCATCAAGGACGCCAAG
GAGAAGAAGGCCGCCAACGAGAGCCGCAAGCGTGCTGAGAAGGCCAAGGC
CGCTGCCTCCGGTGCCAAGCCCGCTCAGCGCATCCAGAGCAAGCAGGGTG
CTAAGGGCTCTGCCCCCAAGGTCGCTGCCAAGTCGCGTTAAAACGGATTA
GAGGCGGTACTGGCTGTTGGGACTGGGATGAAAGTAAAAGGATAAGAAAT
GACAACACTATGGGGGGAATATGTTATGGACATAGGGAATTTGGGAGGTT
ATTCTAATAAAAAAGAAACCCCCGAGGAGCGTTTTTCTTTTGCCTCATCA
AAGATTTCTATTCTCCAAAA
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Coding sequence (CDS) from alignment at ACJE01000006.1:1265869..1267038+

>ASPNIDRAFT_201930-T1 ID=ASPNIDRAFT_201930-T1|Name=ASPNIDRAFT_201930-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1440bp|location=Sequence derived from alignment at ACJE01000006.1:1265869..1267038+ (Aspergillus niger ATCC 1015)
ATGCGTACCTACGACGATTCTTTCAGCGGTCAGAAGATCTACCCTGGAAA
GGGTAAGCTGTACGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAATG
GAAAGTCCGAGTCCCTCTTCCTCCAGCGCAAGAACCCCCGCCGCATCGCC
TGGACTGTCCTCTACCGTCGCCAGCACAAGAAGGGCATCTCTGAAGAAGT
TGCCAAGAAGCGCACCCGCCGTGTCGTGAAGAGCCAGCGTGCCATCGTTG
GTGCCTCCCTCGACGTGATCAAGGAGCGCCGCGCTCAGCGCCCCGAGGCC
CGTGCCGCCGCCCGCCAGCAGGCCATCAAGGACGCCAAGGAGAAGAAGGC
CGCCAACGAGAGCCGCAAGCGTGCTGAGAAGGCCAAGGCCGCTGCCTCCG
GTGCCAAGCCCGCTCAGCGCATCCAGAGCAAGCAGGGTGCTAAGGGCTCT
GCCCCCAAGGTCGCTGCCAAGTCGCGTTAAATGCGTACCTACGACGATTC
TTTCAGCGGTCAGAAGATCTACCCTGGAAAGGGTAAGCTGTACGTCCGTG
GCGACAGCAAGATCTTCCGCTTCCAGAATGGAAAGTCCGAGTCCCTCTTC
CTCCAGCGCAAGAACCCCCGCCGCATCGCCTGGACTGTCCTCTACCGTCG
CCAGCACAAGAAGGGCATCTCTGAAGAAGTTGCCAAGAAGCGCACCCGCC
GTGTCGTGAAGAGCCAGCGTGCCATCGTTGGTGCCTCCCTCGACGTGATC
AAGGAGCGCCGCGCTCAGCGCCCCGAGGCCCGTGCCGCCGCCCGCCAGCA
GGCCATCAAGGACGCCAAGGAGAAGAAGGCCGCCAACGAGAGCCGCAAGC
GTGCTGAGAAGGCCAAGGCCGCTGCCTCCGGTGCCAAGCCCGCTCAGCGC
ATCCAGAGCAAGCAGGGTGCTAAGGGCTCTGCCCCCAAGGTCGCTGCCAA
GTCGCGTTAAATGCGTACCTACGACGATTCTTTCAGCGGTCAGAAGATCT
ACCCTGGAAAGGGTAAGCTGTACGTCCGTGGCGACAGCAAGATCTTCCGC
TTCCAGAATGGAAAGTCCGAGTCCCTCTTCCTCCAGCGCAAGAACCCCCG
CCGCATCGCCTGGACTGTCCTCTACCGTCGCCAGCACAAGAAGGGCATCT
CTGAAGAAGTTGCCAAGAAGCGCACCCGCCGTGTCGTGAAGAGCCAGCGT
GCCATCGTTGGTGCCTCCCTCGACGTGATCAAGGAGCGCCGCGCTCAGCG
CCCCGAGGCCCGTGCCGCCGCCCGCCAGCAGGCCATCAAGGACGCCAAGG
AGAAGAAGGCCGCCAACGAGAGCCGCAAGCGTGCTGAGAAGGCCAAGGCC
GCTGCCTCCGGTGCCAAGCCCGCTCAGCGCATCCAGAGCAAGCAGGGTGC
TAAGGGCTCTGCCCCCAAGGTCGCTGCCAAGTCGCGTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL24ASPNIDRAFT_201930Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201930-T1ASPNIDRAFT_201930-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201930-T1.utr5p1ASPNIDRAFT_201930-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201930-T1.exon1ASPNIDRAFT_201930-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201930-T1.exon2ASPNIDRAFT_201930-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_201930-T1.exon3ASPNIDRAFT_201930-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201930-T1.cdsASPNIDRAFT_201930-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_201930-T1.utr3p1ASPNIDRAFT_201930-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023442
DBxrefInterPro:IPR000988
DBxrefInterPro:IPR038630
DBxrefPFAM:PF01246
Product60S ribosomal protein L24
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1265869..1267038 +
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