You are here

Home

ASPNIDRAFT_202252-T1, ASPNIDRAFT_202252-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_202252-T1
Unique NameASPNIDRAFT_202252-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:230457..231980+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_202252-T1 ID=ASPNIDRAFT_202252-T1|Name=ASPNIDRAFT_202252-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1524bp|location=Sequence derived from alignment at ACJE01000020.1:230457..231980+ (Aspergillus niger ATCC 1015)
TGCGGTAGTTTAACCCTGCCACATATCCCCGGGGTTGACATCATATCCAT
GACGCGCCAAGAGGTCCATAACTACAGCGTAGCAACCTCCCCGCCATACA
ATCTCGCAGACGTACACAATCTTGACTTCTGCAACGTATCCGTCACTCTG
ACTCACCCTGGTGAAGATGACACCGTCTCCGTCTCCGTCTGGCTCCCCCT
AAACAACTGGAACGGCCGTTTCCAGGCTACTGGTGGCGGCGGCCTCGCAG
CCGGTATCATTGGCTTAGCACCAGCTCACCCAGTCAGCCAGGGCTACGCA
ACAGCTGCTACCGATGGCGGACTAACCTTGAATGGAACCAGTAATCCCCA
GACGGGGGCCTGGATTCTGCGCCCCGACGGTTCCATCAACACTGCTCTGC
TACTGAACTTTGCCCATCGCTCGATCTATGACATGACTATCATCGGGAAG
ACTCTCGCCGAGCGCTTCTACGGATCCCCGCCAAGATACTCCTACTGGAG
CGGCTGCTCTACCGGCGGCAGGCAGGGATACTTTGCTGCAGCAAAGTATC
CGAATCTCTTCGATGGAGTTCTAGCCGGTGCACCGGCCCTCAATTTCCCA
CGTTTGATCGGGTATATGTTCTGGCCGCCGGTGCATATGTTCCATTCCGC
CGCGCCACCACAGTGCGTCTTTGACACCTTTTGGAAAGCAATTATAGACG
AATGCGATCCACTTGATGGAGCCACGGACGGGTTGATATCGGATTACAAT
CCACAGAGCTGCCCATTCAATCCCGAAACACTTGTTGGGCACACGGTAAC
CTGTCCGGAGATGGGCTCAGATTCCCCAGTGACCATCACAGCCCAGCACG
CCACCCTCGTCAAGCAAATCCTGCAGGGCCCTGATCTACAAGATCACCCC
GACCTCTGGACAGGCCTTCCACCGGGCGCCTCATTCCGCGGAACGGCAAA
CACTCAAGTAATCAACGGATCCATCGTCAGGCCCGTCCCCTTCTTCCCCA
TCATCGGCTGGATTAAGAACTTCGTTTATCGGGACCCGGACTACAACGTA
TTCGACATGACCTTCGACGACTTCAACACCGCCTACCGCCTCACGCTGGA
CGGTTACAATGGCATTCTCGGATCGGATGATCTGAATCTCTCTGAGTTTC
GTCGTGCAGGGGGGAAGCTATTGACCTGGCACGGGTTGGCGGATGAGTTA
ATTCCAGCGTCATGGACGAACGCATTCTGGGAGGGGATTGATAAGACGGA
CGGTGCGGATGTGGATGAGTTCTATCGGGTTTTCCTTGCCCCTGGCCTGG
GTCACTGCTCGGCTGGGCATGGACCGAAACCCGTTGATCTGTTGGGCGCA
TTGGTGCGCTGGGTGGAGGAAGGGATTGCGCCTGATAGGTTGAGTGCGGC
GGCTGTCAAGGCGGATGGGAAGGAGGTGACGAGGGAGTTGTGTCGGTATC
CGGCGACGCTGGTGTACGATGGGCATGGGGATGTGAATGATGCGGGGAGT
TTTTCGTGTAGGCCTCGGGAGGGG
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:230457..231980+

>ASPNIDRAFT_202252-T1 ID=ASPNIDRAFT_202252-T1|Name=ASPNIDRAFT_202252-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1476bp|location=Sequence derived from alignment at ACJE01000020.1:230457..231980+ (Aspergillus niger ATCC 1015)
ATGACGCGCCAAGAGGTCCATAACTACAGCGTAGCAACCTCCCCGCCATA
CAATCTCGCAGACGTACACAATCTTGACTTCTGCAACGTATCCGTCACTC
TGACTCACCCTGGTGAAGATGACACCGTCTCCGTCTCCGTCTGGCTCCCC
CTAAACAACTGGAACGGCCGTTTCCAGGCTACTGGTGGCGGCGGCCTCGC
AGCCGGTATCATTGGCTTAGCACCAGCTCACCCAGTCAGCCAGGGCTACG
CAACAGCTGCTACCGATGGCGGACTAACCTTGAATGGAACCAGTAATCCC
CAGACGGGGGCCTGGATTCTGCGCCCCGACGGTTCCATCAACACTGCTCT
GCTACTGAACTTTGCCCATCGCTCGATCTATGACATGACTATCATCGGGA
AGACTCTCGCCGAGCGCTTCTACGGATCCCCGCCAAGATACTCCTACTGG
AGCGGCTGCTCTACCGGCGGCAGGCAGGGATACTTTGCTGCAGCAAAGTA
TCCGAATCTCTTCGATGGAGTTCTAGCCGGTGCACCGGCCCTCAATTTCC
CACGTTTGATCGGGTATATGTTCTGGCCGCCGGTGCATATGTTCCATTCC
GCCGCGCCACCACAGTGCGTCTTTGACACCTTTTGGAAAGCAATTATAGA
CGAATGCGATCCACTTGATGGAGCCACGGACGGGTTGATATCGGATTACA
ATCCACAGAGCTGCCCATTCAATCCCGAAACACTTGTTGGGCACACGGTA
ACCTGTCCGGAGATGGGCTCAGATTCCCCAGTGACCATCACAGCCCAGCA
CGCCACCCTCGTCAAGCAAATCCTGCAGGGCCCTGATCTACAAGATCACC
CCGACCTCTGGACAGGCCTTCCACCGGGCGCCTCATTCCGCGGAACGGCA
AACACTCAAGTAATCAACGGATCCATCGTCAGGCCCGTCCCCTTCTTCCC
CATCATCGGCTGGATTAAGAACTTCGTTTATCGGGACCCGGACTACAACG
TATTCGACATGACCTTCGACGACTTCAACACCGCCTACCGCCTCACGCTG
GACGGTTACAATGGCATTCTCGGATCGGATGATCTGAATCTCTCTGAGTT
TCGTCGTGCAGGGGGGAAGCTATTGACCTGGCACGGGTTGGCGGATGAGT
TAATTCCAGCGTCATGGACGAACGCATTCTGGGAGGGGATTGATAAGACG
GACGGTGCGGATGTGGATGAGTTCTATCGGGTTTTCCTTGCCCCTGGCCT
GGGTCACTGCTCGGCTGGGCATGGACCGAAACCCGTTGATCTGTTGGGCG
CATTGGTGCGCTGGGTGGAGGAAGGGATTGCGCCTGATAGGTTGAGTGCG
GCGGCTGTCAAGGCGGATGGGAAGGAGGTGACGAGGGAGTTGTGTCGGTA
TCCGGCGACGCTGGTGTACGATGGGCATGGGGATGTGAATGATGCGGGGA
GTTTTTCGTGTAGGCCTCGGGAGGGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202252ASPNIDRAFT_202252Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202252-T1.utr5p1ASPNIDRAFT_202252-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202252-T1.exon1ASPNIDRAFT_202252-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202252-T1.cdsASPNIDRAFT_202252-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202252-T1ASPNIDRAFT_202252-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR011118
DBxrefPFAM:PF07519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:230457..231980 +
Powered by Drupal