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ASPNIDRAFT_202301-T1, ASPNIDRAFT_202301-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_202301-T1
Unique NameASPNIDRAFT_202301-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:427326..429137-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_202301-T1 ID=ASPNIDRAFT_202301-T1|Name=ASPNIDRAFT_202301-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1812bp|location=Sequence derived from alignment at ACJE01000020.1:427326..429137- (Aspergillus niger ATCC 1015)
GCTGGTCGGACACCATTCGAACTGCACCCTTCCCCCCGCTAACAACCATT
CACTCCGATCCGAATCTGCAGGATTCCCGACAGGAACTCCCGCCAAACAT
CCGACTTCGCCTCACCTGGGCATCGCGCGACCTCTACATCCAATAGCTCC
TGTATCCCATTCAGACTCTCGCGGGAAGGGTCTCTGGAAGAAAACCTCTA
GTTCTTCCCTTCTAAATTTTACGAGCGATTGATCCAGACACCTCTTTCAA
AATGCCTGACGTGAGTTCCGCCTCCCTCTCCGGGTTCAGCAATGGCACCC
TCTCCCACTGGCGCTCGACGCGAACAAATTCGGTCTTCTTTCACTCGATC
GCATGACGCTGACGTGACGCTTTTTCTCTACTTCTACAGGTTAAAAGAAA
TGTCAGATTGGTGACCGAGCAGCACATCGTGTACGTTGTATCCTACTAAA
TACTCCCGGTTCCCGAGTCATTCCTGAATGAATCACCGCCGCTTCTCTTC
CTCGTCATCGCTGCCTATCCTTCTCCACCTTCTTCTCGCATCCGTCGTTG
GTCATCGCGCGATGGTTGTTCGCTGTGCGCTTGGGCTCCCAACACGGTTA
CCTCTGCAGAGAATGGCACAAGGGCAGAAGCTTGGAATGAGAAAGTCCTC
CTTGCTGACCTAGTGCGCGTCTTCGCGTCTACAGGAACAAAGACTCCGGC
GTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTACGTTGTCAA
TGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGTGACATACA
CGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTACGTCACACCCT
CTGCTCTTCGCACACCCCCGATCAGCGTCCGGCCAGTGGGAACCGGACGA
CAGAGATGGTCGACTTTACAAGGGATAGGTGAAATGGGTCACTAGCGGCT
GCTGACCTCAGAATAGCCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGA
AGGATGGGGTGAGTTCGATATGCAAATAGGACTCACTGCTGCCGACAAGG
AGCATTTCGTTACGCACGACCTGAACTTTGCTCAGCCCCGTTACGAATCC
AAGCACGTCATTGTGAGTAATTGGCCCTCGGTGGAACACCATTGATTGTG
CTAATTTTCTCTCTCCCGTATAGACGTTCAAGAACCCCAAGCCTGCCCTA
CTAGCCCTCCTCCGCGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGT
GAAGTCGAAACGCGCCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGC
GCACAGAGAAGAGTGTAAGCGACGACTCATTCTCCTCAGAGAAGAAGAAA
ATAACAATAGAAACACCTCTGACATGATCACTATCCCAGGTTGACATGGA
CAAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGG
TAGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAAC
GATGTTGAGCGTAAGCTACCACCACCGCCGCCCCTCGAAATTCCCATCCC
ACTAACCAATTCAATCCATAACAGAGGGAGAATTCCACGTCGACCTATAT
ACGCTTCCAGACACCCTAATCAAGATGCTGTGGGATTTCACGCAGGAGAA
AGGCGCTTTGTGAAAAAAACAACTACTAGTTACCCCATATTTTTCCTTTT
CAAACCTCCTTTTGGGCGAAACAATTGCTATTTTGTTGTATCTCTCTCTG
GCTTGTCTTTTTTTTTTTCCTCCCTCCAACCCACCCCTTATTCCACTCAA
AGTTTCTAACTA
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Coding sequence (CDS) from alignment at ACJE01000020.1:427326..429137-

>ASPNIDRAFT_202301-T1 ID=ASPNIDRAFT_202301-T1|Name=ASPNIDRAFT_202301-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4893bp|location=Sequence derived from alignment at ACJE01000020.1:427326..429137- (Aspergillus niger ATCC 1015)
AGGGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAG
ATGCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGA
CAAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGG
TAGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAAC
GATGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCC
GCGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGC
GCCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAG
TCCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTT
CGATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGC
ACGACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAA
CAAAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGA
TCTACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGAT
AAAGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAG
TTAAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACA
GGGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGA
TGCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGAC
AAGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGT
AGTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACG
ATGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCG
CGAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCG
CCGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGT
CCTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTC
GATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCA
CGACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAAC
AAAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGAT
CTACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATA
AAGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGT
TAAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAG
GGAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGAT
GCTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACA
AGCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTA
GTACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGA
TGTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGC
GAATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGC
CGCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTC
CTTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCG
ATATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCAC
GACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACA
AAGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATC
TACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAA
AGTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTT
AAAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGG
GAGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATG
CTGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAA
GCTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAG
TACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGAT
GTTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCG
AATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCC
GCAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCC
TTCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGA
TATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACG
ACCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAA
AGACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCT
ACGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAA
GTGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTA
AAAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGG
AGAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGC
TGTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAG
CTGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGT
ACAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATG
TTGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGA
ATCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCG
CAGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCT
TCAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGAT
ATGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGA
CCTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAA
GACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTA
CGTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAG
TGACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAA
AAGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGGA
GAATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGCT
GTGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAGC
TGGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGTA
CAGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATGT
TGAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGAA
TCCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCGC
AGCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCTT
CAAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGATA
TGCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGAC
CTGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAAG
ACTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTAC
GTTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGT
GACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAAA
AGAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGACAGGGAG
AATTCCACGTCGACCTATATACGCTTCCAGACACCCTAATCAAGATGCTG
TGGGATTTCACGCAGGAGAAAGGCGCTTTGTGAGTTGACATGGACAAGCT
GGCCGACGGTCTGCAGCGACTCGGCGAAGATGACCTCCTCCAGGTAGTAC
AGATGGTGCACGACAACAAAGCCCCAGACTCGTATACCAAGAACGATGTT
GAGCACGTTCAAGAACCCCAAGCCTGCCCTACTAGCCCTCCTCCGCGAAT
CCGGACCCGTCCCAGGAGACGAAAATGGCGTGAAGTCGAAACGCGCCGCA
GCCGGAGAGGAGGGATCCAAGAAGAAGAAGCGCACAGAGAAGAGTCCTTC
AAGAATCCCCCCTTCAGAATCTCAGAGGAAGGATGGGGTGAGTTCGATAT
GCAAATAGGACTCACTGCTGCCGACAAGGAGCATTTCGTTACGCACGACC
TGAACTTTGCTCAGCCCCGTTACGAATCCAAGCACGTCATTGAACAAAGA
CTCCGGCGTTGAAGGATTCCCCCTCCGATCATGGTCAATTGAGATCTACG
TTGTCAATGAGCACGGCGAGCAGGTGCCTGCGAATGTCTTCGATAAAGTG
ACATACACGCTGCACCCTAGTTTCGGCGACAGGGCCATTCAGAGTTAAAA
GAAATGTCAGATTGGTGACCGAGCAGCACATCGTATGCCTGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202301ASPNIDRAFT_202301Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202301-T1ASPNIDRAFT_202301-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202301-T1.cdsASPNIDRAFT_202301-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202301-T1.utr3p1ASPNIDRAFT_202301-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202301-T1.exon7ASPNIDRAFT_202301-T1.exon7Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202301-T1.exon6ASPNIDRAFT_202301-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202301-T1.exon5ASPNIDRAFT_202301-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202301-T1.exon4ASPNIDRAFT_202301-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202301-T1.exon3ASPNIDRAFT_202301-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202301-T1.exon2ASPNIDRAFT_202301-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202301-T1.exon1ASPNIDRAFT_202301-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202301-T1.utr5p1ASPNIDRAFT_202301-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR005033
DBxrefInterPro:IPR016665
DBxrefInterPro:IPR038704
DBxrefPFAM:PF03366
Product auxiliary subunit
Producttranscription initiation factor IIF
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:427326..429137 -
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