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ASPNIDRAFT_202504-T1, ASPNIDRAFT_202504-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_202504-T1
Unique NameASPNIDRAFT_202504-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:992457..993980+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_202504-T1 ID=ASPNIDRAFT_202504-T1|Name=ASPNIDRAFT_202504-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1524bp|location=Sequence derived from alignment at ACJE01000020.1:992457..993980+ (Aspergillus niger ATCC 1015)
CCTGACCCCGACTCCCCTTCAACGACGACAACGACCGACCCATCCCCCTC
CACCCCTCCCTCGTCCCTCTCTTCGATTCCCCGTTCGAGGTTCAACAAGT
CGCAAAAATGGGTGGTGTCACCGTTCGCGATGTCGACGTAAGTCATGTCA
TGTCAACTTTTGGAGATTGGTTGGTCGGTGCGGAATGGATGGGATATATG
GCATGGCATGGTATGGCACGGCACGATCAGGACAAAATGAGAAGAAAAGA
ACGACAGGAATGGGAAATACACATGGTATCGGCATTCAACGGAGCAGAAA
TCGACATTTTGATATCGAATTTGGGCGCATGCAGCAAAGCAAGCAAGGCT
GGGTACATATACTCTGGGCATGAGATGTGATGAGTTTATGGGCTTGGAAT
GGGAATACGCAATGCACGACTACCACGATTGTGTACTCCAGCCATATATT
ATGGAATATGGGAATTCTGGATGAAATGGATGTTATGGAGTCAGGAACGA
ACTGGAATTCCTGCCGCCGCGACACGCAGAGAAATGTCCAGATTTGCCGA
TACGTGCCGTGCCATGCTATATGCCATATCATGCCTGAATGCGCACCTGC
CAGACAATCTTCAATACACGATGCCTGTGGACGGATCAGCTAACAGGTTT
CCTTTTCCATGGTTATAGGCGCAGAAGTTCATCGCTGCTTACTCTGCTTT
CCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGGTTCGTGCACACCGGATT
TCATCGAAAAGTCGTAACAATCAGATCAAAACTAATACGGTTATTAGGAT
GGGTTGACACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGAC
GCCGACTGGTACGACAACTGCCATTGATCCAATACTTCGAAAAAAAAAAA
AAAAAAAAACAGCGTGATTAATAGAAATCTGCAATAGGTACTACGTCCGC
GCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGG
CCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCG
CCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCC
CTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCG
CATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCG
TTGACGAGGAGGAGGACGAGGAGTAAATTAGTCTCTCCGGATGCTCGAGC
TAAAATAATGAAAAAGTCCTGATGTTACTCTTTTTCTCCGAACCCTTACC
TTCTGTCTTCCCTACCTTCCTGGCACACTCCCTATCGAAAGCTGAGCCAG
GCTAAGCTTCTTTGCTTTTCTTTAACTCCCCGTTTGTCATTGTGACACCA
AATCCCGCGCGGGATCTGGGGGTTCACAACAGATAACGGGGCCATCGTTG
GGGGGGTGCGTTGGGTTAGATGGGAAATGGAATATGGGACGAATGAGTGG
CTATGACAGGGAGAGGATGACTTG
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Coding sequence (CDS) from alignment at ACJE01000020.1:992457..993980+

>ASPNIDRAFT_202504-T1 ID=ASPNIDRAFT_202504-T1|Name=ASPNIDRAFT_202504-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1776bp|location=Sequence derived from alignment at ACJE01000020.1:992457..993980+ (Aspergillus niger ATCC 1015)
ATGGGTGGTGTCACCGTTCGCGATGTCGACGCGCAGAAGTTCATCGCTGC
TTACTCTGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGGATGGG
TTGACACTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCC
GACTGGTACTACGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCG
CAAGACCGTCGGTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGA
ACCGCGGCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGAC
CGTAAGGTCATCCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGA
GGAGAAGGGTGGCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACC
GTATCGCCAAGACCACCGTTGACGAGGAGGAGGACGAGGAGTAAATGGGT
GGTGTCACCGTTCGCGATGTCGACGCGCAGAAGTTCATCGCTGCTTACTC
TGCTTTCCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGGATGGGTTGACA
CTGTCAAGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGG
TACTACGTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGAC
CGTCGGTGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCG
GCTCCCGCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAG
GTCATCCAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAA
GGGTGGCCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCG
CCAAGACCACCGTTGACGAGGAGGAGGACGAGGAGTAAATGGGTGGTGTC
ACCGTTCGCGATGTCGACGCGCAGAAGTTCATCGCTGCTTACTCTGCTTT
CCTGAAGCGTCAGGGAAAGCTCCCCATTCCTGGATGGGTTGACACTGTCA
AGACCTCCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGTACTAC
GTCCGCGCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGG
TGTTGGCCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCC
GCCCCGCCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATC
CAGTCCCTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGG
CCGCCGCATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGA
CCACCGTTGACGAGGAGGAGGACGAGGAGTAAATGGGTGGTGTCACCGTT
CGCGATGTCGACGCGCAGAAGTTCATCGCTGCTTACTCTGCTTTCCTGAA
GCGTCAGGGAAAGCTCCCCATTCCTGGATGGGTTGACACTGTCAAGACCT
CCTGCTCTAACGAGCTCCCTCCCCAGGACGCCGACTGGTACTACGTCCGC
GCCGCTGCCGTCGCTCGCCACATCTACATGCGCAAGACCGTCGGTGTTGG
CCGTCTCCGCAAGGTCCACGGTTCCACCAAGAACCGCGGCTCCCGCCCCG
CCCACCACGTCGATGCCTCCGGCTCCGTCGACCGTAAGGTCATCCAGTCC
CTCGAGAAGATCGGTGTCCTCGAGCACGATGAGGAGAAGGGTGGCCGCCG
CATCACCCAGAGCGGCCAGCGTGATCTTGACCGTATCGCCAAGACCACCG
TTGACGAGGAGGAGGACGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS19ASPNIDRAFT_202504Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202504-T1ASPNIDRAFT_202504-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202504-T1.utr5p1ASPNIDRAFT_202504-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202504-T1.exon1ASPNIDRAFT_202504-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202504-T1.exon2ASPNIDRAFT_202504-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202504-T1.exon3ASPNIDRAFT_202504-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202504-T1.exon4ASPNIDRAFT_202504-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202504-T1.cdsASPNIDRAFT_202504-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202504-T1.utr3p1ASPNIDRAFT_202504-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR038111
DBxrefInterPro:IPR001266
DBxrefPFAM:PF01090
Product40S ribosomal protein S19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:992457..993980 +
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